RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 HOXC10Q9NYD6 342 aa16.34■□□□□ 0.21
CHRNA1-204ENST00000409323 ORC3Q9UBD5 711 aaPredicted RBP16.34■□□□□ 0.21
CHRNA1-204ENST00000409323 PNMA3Q9UL41 463 aa16.34■□□□□ 0.21
CHRNA1-204ENST00000409323 PLA2G6O60733 806 aa16.33■□□□□ 0.2
CHRNA1-204ENST00000409323 TRPA1O75762 1119 aa16.33■□□□□ 0.2
CHRNA1-204ENST00000409323 CNMDO75829 334 aa16.33■□□□□ 0.2
CHRNA1-204ENST00000409323 FMNL1O95466 1100 aaPredicted RBP16.33■□□□□ 0.2
CHRNA1-204ENST00000409323 HSP90AA1P07900 732 aaKnown RBP16.33■□□□□ 0.2
CHRNA1-204ENST00000409323 FDPSP14324 419 aaKnown RBP16.33■□□□□ 0.2
CHRNA1-204ENST00000409323 CUL4AQ13619 759 aa16.33■□□□□ 0.2
CHRNA1-204ENST00000409323 PPP2R5BQ15173 497 aa16.33■□□□□ 0.2
CHRNA1-204ENST00000409323 PKN1Q16512 942 aa16.33■□□□□ 0.2
CHRNA1-204ENST00000409323 Q3C1V9 767 aa16.33■□□□□ 0.2
CHRNA1-204ENST00000409323 OTUD7BQ6GQQ9 843 aa16.33■□□□□ 0.2
CHRNA1-204ENST00000409323 CPLX2Q6PUV4 134 aaKnown RBP16.33■□□□□ 0.2
CHRNA1-204ENST00000409323 HEATR3Q7Z4Q2 680 aa16.33■□□□□ 0.2
CHRNA1-204ENST00000409323 IPO9Q96P70 1041 aaKnown RBP16.33■□□□□ 0.2
CHRNA1-204ENST00000409323 RANBP17Q9H2T7 1088 aaKnown RBP16.33■□□□□ 0.2
CHRNA1-204ENST00000409323 SLC38A10Q9HBR0 1119 aa16.33■□□□□ 0.2
CHRNA1-204ENST00000409323 RBPJLQ9UBG7 517 aa16.33■□□□□ 0.2
CHRNA1-204ENST00000409323 TSKSQ9UJT2 592 aa16.33■□□□□ 0.2
CHRNA1-204ENST00000409323 ZNF536O15090 1300 aa16.33■□□□□ 0.2
CHRNA1-204ENST00000409323 THSD7BQ9C0I4 1608 aa16.32■□□□□ 0.2
CHRNA1-204ENST00000409323 A0A0G2JMZ2 1700 aa16.32■□□□□ 0.2
CHRNA1-204ENST00000409323 CEP350Q5VT06 3117 aa16.32■□□□□ 0.2
CHRNA1-204ENST00000409323 ZBTB5O15062 677 aa16.32■□□□□ 0.2
CHRNA1-204ENST00000409323 ZBED4O75132 1171 aa16.32■□□□□ 0.2
CHRNA1-204ENST00000409323 MAP2K2P36507 400 aa16.32■□□□□ 0.2
CHRNA1-204ENST00000409323 AKAP17AQ02040 695 aaKnown RBP16.32■□□□□ 0.2
CHRNA1-204ENST00000409323 BECN1Q14457 450 aa16.32■□□□□ 0.2
CHRNA1-204ENST00000409323 REPS2Q8NFH8 660 aa16.32■□□□□ 0.2
CHRNA1-204ENST00000409323 SEC63Q9UGP8 760 aaKnown RBP16.32■□□□□ 0.2
CHRNA1-204ENST00000409323 ADAMTS5Q9UNA0 930 aa16.32■□□□□ 0.2
CHRNA1-204ENST00000409323 SLC45A1Q9Y2W3 748 aa16.32■□□□□ 0.2
CHRNA1-204ENST00000409323 RIPK3Q9Y572 518 aa16.32■□□□□ 0.2
CHRNA1-204ENST00000409323 PRPF3O43395 683 aaKnown RBP16.31■□□□□ 0.2
CHRNA1-204ENST00000409323 CDKL5O76039 1030 aa16.31■□□□□ 0.2
CHRNA1-204ENST00000409323 GJB2P29033 226 aa16.31■□□□□ 0.2
CHRNA1-204ENST00000409323 WWC2Q6AWC2 1192 aa16.31■□□□□ 0.2
CHRNA1-204ENST00000409323 LBX2Q6XYB7 198 aa16.31■□□□□ 0.2
CHRNA1-204ENST00000409323 TRIM22Q8IYM9 498 aa16.31■□□□□ 0.2
CHRNA1-204ENST00000409323 DNAJC5GQ8N7S2 189 aa16.31■□□□□ 0.2
CHRNA1-204ENST00000409323 IL27Q8NEV9 243 aa16.31■□□□□ 0.2
CHRNA1-204ENST00000409323 SHISA4Q96DD7 197 aa16.31■□□□□ 0.2
CHRNA1-204ENST00000409323 MTMR8Q96EF0 704 aa16.31■□□□□ 0.2
CHRNA1-204ENST00000409323 RNF186Q9NXI6 227 aa16.31■□□□□ 0.2
CHRNA1-204ENST00000409323 ZNF214Q9UL59 606 aaPredicted RBP16.31■□□□□ 0.2
CHRNA1-204ENST00000409323 CCPG1Q9ULG6 757 aa16.31■□□□□ 0.2
CHRNA1-204ENST00000409323 PNMA6FA0A0J9YX94 578 aa16.3■□□□□ 0.2
CHRNA1-204ENST00000409323 ALAS1P13196 640 aa16.3■□□□□ 0.2
CHRNA1-204ENST00000409323 SNRNP48Q6IEG0 339 aaKnown RBP16.3■□□□□ 0.2
CHRNA1-204ENST00000409323 FBXO11Q86XK2 927 aa16.3■□□□□ 0.2
CHRNA1-204ENST00000409323 SMARCC2Q8TAQ2 1214 aa16.3■□□□□ 0.2
CHRNA1-204ENST00000409323 RNF26Q9BY78 433 aaPredicted RBP16.3■□□□□ 0.2
CHRNA1-204ENST00000409323 ZFYVE28Q9HCC9 887 aa16.3■□□□□ 0.2
CHRNA1-204ENST00000409323 VPS54Q9P1Q0 977 aa16.3■□□□□ 0.2
CHRNA1-204ENST00000409323 SMC3Q9UQE7 1217 aa16.3■□□□□ 0.2
CHRNA1-204ENST00000409323 MYPNQ86TC9 1320 aa16.3■□□□□ 0.2
CHRNA1-204ENST00000409323 ADGRA2Q96PE1 1338 aa16.3■□□□□ 0.2
CHRNA1-204ENST00000409323 SCG2P13521 617 aa16.3■□□□□ 0.2
CHRNA1-204ENST00000409323 GUCY1B3Q02153 619 aa16.3■□□□□ 0.2
CHRNA1-204ENST00000409323 WDR78Q5VTH9 848 aa16.3■□□□□ 0.2
CHRNA1-204ENST00000409323 TYW1BQ6NUM6 668 aa16.3■□□□□ 0.2
CHRNA1-204ENST00000409323 ZSWIM8A7E2V4 1837 aa16.29■□□□□ 0.2
CHRNA1-204ENST00000409323 ADAMTS3O15072 1205 aa16.29■□□□□ 0.2
CHRNA1-204ENST00000409323 CA12O43570 354 aa16.29■□□□□ 0.2
CHRNA1-204ENST00000409323 ICAM1P05362 532 aa16.29■□□□□ 0.2
CHRNA1-204ENST00000409323 SMARCA1P28370 1054 aa16.29■□□□□ 0.2
CHRNA1-204ENST00000409323 STAT3P40763 770 aa16.29■□□□□ 0.2
CHRNA1-204ENST00000409323 ERVK-9P63128 1117 aa16.29■□□□□ 0.2
CHRNA1-204ENST00000409323 ERVK-24P63145 666 aa16.29■□□□□ 0.2
CHRNA1-204ENST00000409323 PFKFB3Q16875 520 aaPredicted RBP16.29■□□□□ 0.2
CHRNA1-204ENST00000409323 MUM1L1Q5H9M0 696 aa16.29■□□□□ 0.2
CHRNA1-204ENST00000409323 FAM184AQ8NB25 1140 aa16.29■□□□□ 0.2
CHRNA1-204ENST00000409323 LLPHQ9BRT6 129 aaKnown RBP16.29■□□□□ 0.2
CHRNA1-204ENST00000409323 ALG1Q9BT22 464 aa16.29■□□□□ 0.2
CHRNA1-204ENST00000409323 MOV10L1Q9BXT6 1211 aaKnown RBP16.29■□□□□ 0.2
CHRNA1-204ENST00000409323 SPATC1LQ9H0A9 340 aa16.29■□□□□ 0.2
CHRNA1-204ENST00000409323 PORCNQ9H237 461 aa16.29■□□□□ 0.2
CHRNA1-204ENST00000409323 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.29■□□□□ 0.2
CHRNA1-204ENST00000409323 PCDHA1Q9Y5I3 950 aa16.29■□□□□ 0.2
CHRNA1-204ENST00000409323 TLR2O60603 784 aa16.28■□□□□ 0.2
CHRNA1-204ENST00000409323 DEXIO95424 95 aa16.28■□□□□ 0.2
CHRNA1-204ENST00000409323 NCAPG2Q86XI2 1143 aa16.28■□□□□ 0.2
CHRNA1-204ENST00000409323 AMNQ9BXJ7 453 aa16.28■□□□□ 0.2
CHRNA1-204ENST00000409323 EFCC1Q9HA90 598 aa16.28■□□□□ 0.2
CHRNA1-204ENST00000409323 KCNJ14Q9UNX9 436 aa16.28■□□□□ 0.2
CHRNA1-204ENST00000409323 RABGAP1Q9Y3P9 1069 aa16.28■□□□□ 0.2
CHRNA1-204ENST00000409323 STK36Q9NRP7 1315 aa16.27■□□□□ 0.2
CHRNA1-204ENST00000409323 STXBP3O00186 592 aa16.27■□□□□ 0.2
CHRNA1-204ENST00000409323 NFIBO00712 420 aa16.27■□□□□ 0.2
CHRNA1-204ENST00000409323 NAPAP54920 295 aa16.27■□□□□ 0.2
CHRNA1-204ENST00000409323 GPRC5AQ8NFJ5 357 aa16.27■□□□□ 0.2
CHRNA1-204ENST00000409323 TBC1D5Q92609 795 aa16.27■□□□□ 0.2
CHRNA1-204ENST00000409323 TEX13BQ9BXU2 312 aa16.27■□□□□ 0.2
CHRNA1-204ENST00000409323 ZCCHC17Q9NP64 241 aaKnown RBP16.27■□□□□ 0.2
CHRNA1-204ENST00000409323 ALDH1A1P00352 501 aa16.26■□□□□ 0.19
CHRNA1-204ENST00000409323 BCRP11274 1271 aa16.26■□□□□ 0.19
CHRNA1-204ENST00000409323 ERCC3P19447 782 aa16.26■□□□□ 0.19
CHRNA1-204ENST00000409323 GCLCP48506 637 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms