RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 DUX4L6P0CJ89 424 aa13.24□□□□□ -0.29
SHANK2-203ENST00000409161 DUX4L7P0CJ90 424 aa13.24□□□□□ -0.29
SHANK2-203ENST00000409161 PDE6BP35913 854 aa13.24□□□□□ -0.29
SHANK2-203ENST00000409161 TFCP2Q12800 502 aa13.24□□□□□ -0.29
SHANK2-203ENST00000409161 DMP1Q13316 513 aaPredicted RBP13.24□□□□□ -0.29
SHANK2-203ENST00000409161 DUX4Q9UBX2 424 aa13.24□□□□□ -0.29
SHANK2-203ENST00000409161 HNRNPCL2B2RXH8 293 aa13.24□□□□□ -0.29
SHANK2-203ENST00000409161 HNRNPCL1O60812 293 aaKnown RBP13.24□□□□□ -0.29
SHANK2-203ENST00000409161 HOXB7P09629 217 aa13.24□□□□□ -0.29
SHANK2-203ENST00000409161 BICC1Q9H694 974 aaKnown RBP13.24□□□□□ -0.29
SHANK2-203ENST00000409161 SBNO2Q9Y2G9 1366 aa13.24□□□□□ -0.29
SHANK2-203ENST00000409161 CD19P15391 556 aa13.23□□□□□ -0.29
SHANK2-203ENST00000409161 OCA2Q04671 838 aa13.23□□□□□ -0.29
SHANK2-203ENST00000409161 ATP6V0A1Q93050 837 aa13.23□□□□□ -0.29
SHANK2-203ENST00000409161 MYL1P05976 194 aa13.23□□□□□ -0.29
SHANK2-203ENST00000409161 CCDC92Q53HC0 331 aaPredicted RBP13.23□□□□□ -0.29
SHANK2-203ENST00000409161 NIP7Q9Y221 180 aaKnown RBP eCLIP13.23□□□□□ -0.29
SHANK2-203ENST00000409161 PRAG1Q86YV5 1406 aa13.23□□□□□ -0.29
SHANK2-203ENST00000409161 MAPK13O15264 365 aa13.23□□□□□ -0.29
SHANK2-203ENST00000409161 CHMP2AO43633 222 aa13.23□□□□□ -0.29
SHANK2-203ENST00000409161 FAM96AQ9H5X1 160 aa13.23□□□□□ -0.29
SHANK2-203ENST00000409161 CDC23Q9UJX2 597 aa13.23□□□□□ -0.29
SHANK2-203ENST00000409161 URB2Q14146 1524 aaKnown RBP13.23□□□□□ -0.29
SHANK2-203ENST00000409161 FAM83GA6ND36 823 aa13.23□□□□□ -0.29
SHANK2-203ENST00000409161 MBD4O95243 580 aa13.23□□□□□ -0.29
SHANK2-203ENST00000409161 PYGBP11216 843 aa13.23□□□□□ -0.29
SHANK2-203ENST00000409161 DIS3L2Q8IYB7 885 aaKnown RBP13.23□□□□□ -0.29
SHANK2-203ENST00000409161 ZCRB1Q8TBF4 217 aaKnown RBP13.23□□□□□ -0.29
SHANK2-203ENST00000409161 LMBRD1Q9NUN5 540 aa13.23□□□□□ -0.29
SHANK2-203ENST00000409161 MAPK8IP1Q9UQF2 711 aa13.23□□□□□ -0.29
SHANK2-203ENST00000409161 MCF2P10911 925 aa13.23□□□□□ -0.29
SHANK2-203ENST00000409161 EEF1GP26641 437 aaKnown RBP13.23□□□□□ -0.29
SHANK2-203ENST00000409161 KLC3Q6P597 504 aa13.23□□□□□ -0.29
SHANK2-203ENST00000409161 U2AF1L4Q8WU68 220 aaKnown RBP13.23□□□□□ -0.29
SHANK2-203ENST00000409161 NOP53Q9NZM5 478 aaKnown RBP13.23□□□□□ -0.29
SHANK2-203ENST00000409161 KDM5DQ9BY66 1539 aa13.23□□□□□ -0.29
SHANK2-203ENST00000409161 TAF11Q15544 211 aa13.23□□□□□ -0.29
SHANK2-203ENST00000409161 CADPS2Q86UW7 1296 aa13.23□□□□□ -0.29
SHANK2-203ENST00000409161 PBKQ96KB5 322 aa13.23□□□□□ -0.29
SHANK2-203ENST00000409161 ART3Q13508 389 aa13.23□□□□□ -0.29
SHANK2-203ENST00000409161 TMTC4Q5T4D3 741 aa13.23□□□□□ -0.29
SHANK2-203ENST00000409161 POMGNT1Q8WZA1 660 aa13.23□□□□□ -0.29
SHANK2-203ENST00000409161 TMEM232C9JQI7 657 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 GSTA4O15217 222 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 VPS41P49754 854 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 BFSP1Q12934 665 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 BSPRYQ5W0U4 402 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 TEX11Q8IYF3 940 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 USP6NLQ92738 828 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 A6NJR5 290 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 NEK2P51955 445 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 NR1H3Q13133 447 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.22□□□□□ -0.292e-6■■■■■ 57.2
SHANK2-203ENST00000409161 C6orf118Q5T5N4 469 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 JDP2Q8WYK2 163 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 OLFM3Q96PB7 478 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 TRAPPC8Q9Y2L5 1435 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 PCP11498 1178 aaKnown RBP13.22□□□□□ -0.29
SHANK2-203ENST00000409161 ADKP55263 362 aaKnown RBP13.22□□□□□ -0.29
SHANK2-203ENST00000409161 CWF19L2Q2TBE0 894 aaKnown RBP13.22□□□□□ -0.29
SHANK2-203ENST00000409161 MIGA1Q8NAN2 632 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 ABTB1Q969K4 478 aaPredicted RBP13.22□□□□□ -0.29
SHANK2-203ENST00000409161 C14orf93Q9H972 538 aaKnown RBP13.22□□□□□ -0.29
SHANK2-203ENST00000409161 SGSM2O43147 1006 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 TXKP42681 527 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 SNX1Q13596 522 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.22□□□□□ -0.293e-6■■■■■ 34.3
SHANK2-203ENST00000409161 DTNBP1Q96EV8 351 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 RPS6KC1Q96S38 1066 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 PPME1Q9Y570 386 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 EPN1Q9Y6I3 576 aaPredicted RBP13.22□□□□□ -0.29
SHANK2-203ENST00000409161 TYW5A2RUC4 315 aaKnown RBP13.22□□□□□ -0.29
SHANK2-203ENST00000409161 ACTN1P12814 892 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 GUCY2DQ02846 1103 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 GIPC2Q8TF65 315 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 CD109Q6YHK3 1445 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 NCAPH2Q6IBW4 605 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 ARHGAP18Q8N392 663 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 LCMT1Q9UIC8 334 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 NOD1Q9Y239 953 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 CAPN9O14815 690 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 SERPINB10P48595 397 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 DSCC1Q9BVC3 393 aa13.22□□□□□ -0.29
SHANK2-203ENST00000409161 COPG1Q9Y678 874 aaKnown RBP13.22□□□□□ -0.29
SHANK2-203ENST00000409161 SLC1A4P43007 532 aa13.21□□□□□ -0.29
SHANK2-203ENST00000409161 KRT26Q7Z3Y9 468 aa13.21□□□□□ -0.29
SHANK2-203ENST00000409161 CABP7Q86V35 215 aa13.21□□□□□ -0.29
SHANK2-203ENST00000409161 TCP11Q8WWU5 503 aa13.21□□□□□ -0.29
SHANK2-203ENST00000409161 KLHL29Q96CT2 875 aa13.21□□□□□ -0.29
SHANK2-203ENST00000409161 STK17AQ9UEE5 414 aa13.21□□□□□ -0.29
SHANK2-203ENST00000409161 ZNF215Q9UL58 517 aaPredicted RBP13.21□□□□□ -0.29
SHANK2-203ENST00000409161 UGGT2Q9NYU1 1516 aa13.21□□□□□ -0.29
SHANK2-203ENST00000409161 TEDDM1Q5T9Z0 273 aa13.21□□□□□ -0.29
SHANK2-203ENST00000409161 EP400NLQ6ZTU2 488 aa13.21□□□□□ -0.29
SHANK2-203ENST00000409161 JPH2Q9BR39 696 aaPredicted RBP13.21□□□□□ -0.29
SHANK2-203ENST00000409161 MYO5CQ9NQX4 1742 aa13.21□□□□□ -0.29
SHANK2-203ENST00000409161 ARHGDIAP52565 204 aa13.21□□□□□ -0.29
SHANK2-203ENST00000409161 ADCY2Q08462 1091 aa13.21□□□□□ -0.29
SHANK2-203ENST00000409161 CTNND1O60716 968 aaKnown RBP13.21□□□□□ -0.29
SHANK2-203ENST00000409161 KRT10P13645 584 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms