RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 COA7Q96BR5 231 aa23.59■■□□□ 1.37
CHKB-201ENST00000406938 AGTPBP1Q9UPW5 1226 aa23.59■■□□□ 1.37
CHKB-201ENST00000406938 TMEM88BA6NKF7 163 aa23.58■■□□□ 1.36
CHKB-201ENST00000406938 ZNF157P51786 506 aaPredicted RBP23.58■■□□□ 1.36
CHKB-201ENST00000406938 GTF2A2P52657 109 aa23.58■■□□□ 1.36
CHKB-201ENST00000406938 MS4A4AQ96JQ5 239 aa23.58■■□□□ 1.36
CHKB-201ENST00000406938 ABT1Q9ULW3 272 aaKnown RBP23.58■■□□□ 1.36
CHKB-201ENST00000406938 COG2Q14746 738 aa23.57■■□□□ 1.36
CHKB-201ENST00000406938 RGMBQ6NW40 437 aa23.57■■□□□ 1.36
CHKB-201ENST00000406938 CCDC174Q6PII3 467 aa23.57■■□□□ 1.36
CHKB-201ENST00000406938 FBXO11Q86XK2 927 aa23.57■■□□□ 1.36
CHKB-201ENST00000406938 CCDC12Q8WUD4 166 aaPredicted RBP23.57■■□□□ 1.36
CHKB-201ENST00000406938 ATG4CQ96DT6 458 aa23.57■■□□□ 1.36
CHKB-201ENST00000406938 AMNQ9BXJ7 453 aa23.57■■□□□ 1.36
CHKB-201ENST00000406938 RLFQ13129 1914 aa23.56■■□□□ 1.36
CHKB-201ENST00000406938 CETPP11597 493 aa23.56■■□□□ 1.36
CHKB-201ENST00000406938 HOXA7P31268 230 aaPredicted RBP23.56■■□□□ 1.36
CHKB-201ENST00000406938 DSG3P32926 999 aa23.56■■□□□ 1.36
CHKB-201ENST00000406938 NLRP5P59047 1200 aa23.56■■□□□ 1.36
CHKB-201ENST00000406938 KIF23Q02241 960 aaPredicted RBP23.56■■□□□ 1.36
CHKB-201ENST00000406938 RESTQ13127 1097 aa23.56■■□□□ 1.36
CHKB-201ENST00000406938 NPY5RQ15761 445 aa23.56■■□□□ 1.36
CHKB-201ENST00000406938 PPP1R18Q6NYC8 613 aa23.56■■□□□ 1.36
CHKB-201ENST00000406938 DIS3L2Q8IYB7 885 aaKnown RBP23.56■■□□□ 1.36
CHKB-201ENST00000406938 FAM177A1Q8N128 213 aaPredicted RBP23.56■■□□□ 1.36
CHKB-201ENST00000406938 TNPO1Q92973 898 aaKnown RBP23.56■■□□□ 1.36
CHKB-201ENST00000406938 SLC38A10Q9HBR0 1119 aa23.56■■□□□ 1.36
CHKB-201ENST00000406938 PCDHA1Q9Y5I3 950 aa23.56■■□□□ 1.36
CHKB-201ENST00000406938 MYPNQ86TC9 1320 aa23.56■■□□□ 1.36
CHKB-201ENST00000406938 KIF28PB7ZC32 967 aa23.55■■□□□ 1.36
CHKB-201ENST00000406938 VWA5AO00534 786 aa23.55■■□□□ 1.36
CHKB-201ENST00000406938 SAFBQ15424 915 aaKnown RBP eCLIP23.55■■□□□ 1.36
CHKB-201ENST00000406938 USH1GQ495M9 461 aa23.55■■□□□ 1.36
CHKB-201ENST00000406938 GPAT2Q6NUI2 795 aa23.55■■□□□ 1.36
CHKB-201ENST00000406938 CCL15-CCL14A0A0B4J2E2 113 aa23.55■■□□□ 1.36
CHKB-201ENST00000406938 SPDYE16A6NNV3 312 aaPredicted RBP23.55■■□□□ 1.36
CHKB-201ENST00000406938 TAL1P17542 331 aaPredicted RBP23.55■■□□□ 1.36
CHKB-201ENST00000406938 CCL15Q16663 113 aa23.55■■□□□ 1.36
CHKB-201ENST00000406938 ZMYND12Q9H0C1 365 aa23.55■■□□□ 1.36
CHKB-201ENST00000406938 ZNF536O15090 1300 aa23.54■■□□□ 1.36
CHKB-201ENST00000406938 CALML3P27482 149 aa23.54■■□□□ 1.36
CHKB-201ENST00000406938 IRX3P78415 501 aaPredicted RBP23.54■■□□□ 1.36
CHKB-201ENST00000406938 OXER1Q8TDS5 423 aa23.54■■□□□ 1.36
CHKB-201ENST00000406938 BRI3BPQ8WY22 251 aa23.54■■□□□ 1.36
CHKB-201ENST00000406938 BRMS1Q9HCU9 246 aa23.54■■□□□ 1.36
CHKB-201ENST00000406938 ADAMTS5Q9UNA0 930 aa23.54■■□□□ 1.36
CHKB-201ENST00000406938 ESYT2A0FGR8 921 aa23.53■■□□□ 1.36
CHKB-201ENST00000406938 BTBD18B2RXH4 712 aa23.53■■□□□ 1.36
CHKB-201ENST00000406938 ZBED4O75132 1171 aa23.53■■□□□ 1.36
CHKB-201ENST00000406938 ICAM1P05362 532 aa23.53■■□□□ 1.36
CHKB-201ENST00000406938 SLC10A3P09131 477 aa23.53■■□□□ 1.36
CHKB-201ENST00000406938 FDX1P10109 184 aa23.53■■□□□ 1.36
CHKB-201ENST00000406938 KRT2P35908 639 aa23.53■■□□□ 1.36
CHKB-201ENST00000406938 PABPC4Q13310 644 aaKnown RBP eCLIP23.53■■□□□ 1.36
CHKB-201ENST00000406938 GNL2Q13823 731 aaKnown RBP23.53■■□□□ 1.36
CHKB-201ENST00000406938 ASCC2Q9H1I8 757 aaPredicted RBP23.53■■□□□ 1.36
CHKB-201ENST00000406938 ZSCAN16Q9H4T2 348 aaPredicted RBP23.53■■□□□ 1.36
CHKB-201ENST00000406938 HOXC10Q9NYD6 342 aa23.53■■□□□ 1.36
CHKB-201ENST00000406938 PCDHA4Q9UN74 947 aa23.53■■□□□ 1.36
CHKB-201ENST00000406938 CTDP1Q9Y5B0 961 aaPredicted RBP23.53■■□□□ 1.36
CHKB-201ENST00000406938 SMCO2A6NFE2 343 aa23.52■■□□□ 1.36
CHKB-201ENST00000406938 U2AF2P26368 475 aaKnown RBP eCLIP23.52■■□□□ 1.361e-6■■□□□ 13.5
CHKB-201ENST00000406938 NR5A1Q13285 461 aa23.52■■□□□ 1.36
CHKB-201ENST00000406938 FOXD4L6Q3SYB3 417 aaPredicted RBP23.52■■□□□ 1.36
CHKB-201ENST00000406938 FOXD4L3Q6VB84 417 aaPredicted RBP23.52■■□□□ 1.36
CHKB-201ENST00000406938 DAGLBQ8NCG7 672 aa23.52■■□□□ 1.36
CHKB-201ENST00000406938 FOXP1Q9H334 677 aaPredicted RBP23.52■■□□□ 1.36
CHKB-201ENST00000406938 ADAMTS3O15072 1205 aa23.51■■□□□ 1.35
CHKB-201ENST00000406938 TRAF1Q13077 416 aa23.51■■□□□ 1.35
CHKB-201ENST00000406938 GALNT17Q6IS24 598 aa23.51■■□□□ 1.35
CHKB-201ENST00000406938 BLIDQ8IZY5 108 aa23.51■■□□□ 1.35
CHKB-201ENST00000406938 CPXCR1Q8N123 301 aa23.51■■□□□ 1.35
CHKB-201ENST00000406938 REPS2Q8NFH8 660 aa23.51■■□□□ 1.35
CHKB-201ENST00000406938 HHIPL1Q96JK4 782 aa23.51■■□□□ 1.35
CHKB-201ENST00000406938 AGBL1Q96MI9 1066 aa23.51■■□□□ 1.35
CHKB-201ENST00000406938 RAVER2Q9HCJ3 691 aaKnown RBP23.51■■□□□ 1.35
CHKB-201ENST00000406938 C6orf50Q9HD87 102 aa23.51■■□□□ 1.35
CHKB-201ENST00000406938 CCPG1Q9ULG6 757 aa23.51■■□□□ 1.35
CHKB-201ENST00000406938 A0A0G2JMZ2 1700 aa23.51■■□□□ 1.35
CHKB-201ENST00000406938 BTBD19C9JJ37 291 aa23.51■■□□□ 1.35
CHKB-201ENST00000406938 GNA11P29992 359 aa23.51■■□□□ 1.35
CHKB-201ENST00000406938 ADCY7P51828 1080 aa23.51■■□□□ 1.35
CHKB-201ENST00000406938 P2RX7Q99572 595 aaKnown RBP23.51■■□□□ 1.35
CHKB-201ENST00000406938 ATP6V1DQ9Y5K8 247 aa23.51■■□□□ 1.35
CHKB-201ENST00000406938 FAM155AB1AL88 458 aaPredicted RBP23.5■■□□□ 1.35
CHKB-201ENST00000406938 OSBPP22059 807 aa23.5■■□□□ 1.35
CHKB-201ENST00000406938 FAM173BQ6P4H8 233 aa23.5■■□□□ 1.35
CHKB-201ENST00000406938 BRAPQ7Z569 592 aa23.5■■□□□ 1.35
CHKB-201ENST00000406938 NOSTRINQ8IVI9 506 aa23.5■■□□□ 1.35
CHKB-201ENST00000406938 CHAMP1Q96JM3 812 aa23.5■■□□□ 1.35
CHKB-201ENST00000406938 HERVK_113P62684 666 aa23.49■■□□□ 1.35
CHKB-201ENST00000406938 ANKRD23Q86SG2 305 aa23.49■■□□□ 1.35
CHKB-201ENST00000406938 TNFRSF25Q93038 417 aa23.49■■□□□ 1.35
CHKB-201ENST00000406938 CCDC102AQ96A19 550 aa23.49■■□□□ 1.35
CHKB-201ENST00000406938 RIC8AQ9NPQ8 531 aa23.49■■□□□ 1.35
CHKB-201ENST00000406938 ZNF214Q9UL59 606 aaPredicted RBP23.49■■□□□ 1.35
CHKB-201ENST00000406938 SLC45A1Q9Y2W3 748 aa23.49■■□□□ 1.35
CHKB-201ENST00000406938 ABCB11O95342 1321 aa23.49■■□□□ 1.35
CHKB-201ENST00000406938 M0R2N6 131 aa23.48■■□□□ 1.35
CHKB-201ENST00000406938 PDHXO00330 501 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms