RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 PARP1P09874 1014 aaKnown RBP11.11□□□□□ -0.63
MSH2-202ENST00000406134 TXLNAP40222 546 aa11.11□□□□□ -0.63
MSH2-202ENST00000406134 USP5P45974 858 aa11.11□□□□□ -0.63
MSH2-202ENST00000406134 MIIPQ5JXC2 388 aa11.11□□□□□ -0.63
MSH2-202ENST00000406134 SRGAP1Q7Z6B7 1085 aa11.11□□□□□ -0.63
MSH2-202ENST00000406134 CCDC51Q96ER9 411 aa11.11□□□□□ -0.63
MSH2-202ENST00000406134 CCSER1Q9C0I3 900 aa11.11□□□□□ -0.63
MSH2-202ENST00000406134 ANKRD2Q9GZV1 360 aa11.11□□□□□ -0.63
MSH2-202ENST00000406134 CNGA4Q8IV77 575 aa11.1□□□□□ -0.63
MSH2-202ENST00000406134 MNS1Q8NEH6 495 aa11.1□□□□□ -0.63
MSH2-202ENST00000406134 ZMYND12Q9H0C1 365 aa11.1□□□□□ -0.63
MSH2-202ENST00000406134 ZCCHC17Q9NP64 241 aaKnown RBP11.1□□□□□ -0.63
MSH2-202ENST00000406134 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.1□□□□□ -0.63
MSH2-202ENST00000406134 GOLGA8HP0CJ92 632 aa11.1□□□□□ -0.63
MSH2-202ENST00000406134 ST5P78524 1137 aa11.1□□□□□ -0.63
MSH2-202ENST00000406134 BEND6Q5SZJ8 279 aaPredicted RBP11.1□□□□□ -0.63
MSH2-202ENST00000406134 TEX35Q5T0J7 233 aa11.1□□□□□ -0.63
MSH2-202ENST00000406134 MB21D1Q8N884 522 aa11.1□□□□□ -0.63
MSH2-202ENST00000406134 NLRP3Q96P20 1036 aa11.1□□□□□ -0.63
MSH2-202ENST00000406134 CDC23Q9UJX2 597 aa11.1□□□□□ -0.63
MSH2-202ENST00000406134 LGALS16A8MUM7 142 aa11.1□□□□□ -0.63
MSH2-202ENST00000406134 RHBDL3P58872 404 aa11.1□□□□□ -0.63
MSH2-202ENST00000406134 MEA1Q16626 185 aa11.1□□□□□ -0.63
MSH2-202ENST00000406134 NYXQ9GZU5 481 aa11.1□□□□□ -0.63
MSH2-202ENST00000406134 SUGCTQ9HAC7 445 aa11.1□□□□□ -0.63
MSH2-202ENST00000406134 ATP8B1O43520 1251 aa11.09□□□□□ -0.63
MSH2-202ENST00000406134 GTF2E1P29083 439 aaPredicted RBP11.09□□□□□ -0.63
MSH2-202ENST00000406134 TMED8Q6PL24 325 aaPredicted RBP11.09□□□□□ -0.63
MSH2-202ENST00000406134 C15orf52Q6ZUT6 534 aaKnown RBP11.09□□□□□ -0.63
MSH2-202ENST00000406134 NBPF5PQ86XG9 351 aaPredicted RBP11.09□□□□□ -0.63
MSH2-202ENST00000406134 KIAA0895Q8NCT3 520 aa11.09□□□□□ -0.63
MSH2-202ENST00000406134 KAT14Q9H8E8 782 aa11.09□□□□□ -0.63
MSH2-202ENST00000406134 PRPHP41219 470 aa11.09□□□□□ -0.63
MSH2-202ENST00000406134 TXNRD1Q16881 649 aa11.09□□□□□ -0.63
MSH2-202ENST00000406134 ZNF569Q5MCW4 686 aa11.09□□□□□ -0.63
MSH2-202ENST00000406134 TMCO3Q6UWJ1 677 aa11.09□□□□□ -0.63
MSH2-202ENST00000406134 PPFIBP1Q86W92 1011 aa11.09□□□□□ -0.63
MSH2-202ENST00000406134 NOA1Q8NC60 698 aaKnown RBP11.09□□□□□ -0.63
MSH2-202ENST00000406134 GOLGA1Q92805 767 aa11.09□□□□□ -0.63
MSH2-202ENST00000406134 SETDB2Q96T68 719 aa11.09□□□□□ -0.63
MSH2-202ENST00000406134 PLIN2Q99541 437 aa11.09□□□□□ -0.63
MSH2-202ENST00000406134 N4BP3O15049 544 aa11.09□□□□□ -0.63
MSH2-202ENST00000406134 CALML3P27482 149 aa11.09□□□□□ -0.63
MSH2-202ENST00000406134 STAT6P42226 847 aa11.09□□□□□ -0.63
MSH2-202ENST00000406134 CHMP4BP1P59074 171 aa11.09□□□□□ -0.63
MSH2-202ENST00000406134 C16orf86Q6ZW13 317 aa11.09□□□□□ -0.63
MSH2-202ENST00000406134 PLCD3Q8N3E9 789 aa11.09□□□□□ -0.63
MSH2-202ENST00000406134 TGFBRAP1Q8WUH2 860 aa11.09□□□□□ -0.63
MSH2-202ENST00000406134 AGPAT5Q9NUQ2 364 aa11.09□□□□□ -0.63
MSH2-202ENST00000406134 A0A1W2PQC6 194 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 GNPATO15228 680 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 PLCG1P19174 1290 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 STK4Q13043 487 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 TMTC1Q8IUR5 882 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 HNRNPLLQ8WVV9 542 aaKnown RBP11.08□□□□□ -0.64
MSH2-202ENST00000406134 SLF1Q9BQI6 1058 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 SPZ1Q9BXG8 430 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 ZSWIM4Q9H7M6 989 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 PUF60Q9UHX1 559 aaKnown RBP11.08□□□□□ -0.64
MSH2-202ENST00000406134 CAPN11Q9UMQ6 739 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 ZC3H4Q9UPT8 1303 aaKnown RBP11.08□□□□□ -0.64
MSH2-202ENST00000406134 NUTM2BA6NNL0 878 aaPredicted RBP11.08□□□□□ -0.64
MSH2-202ENST00000406134 NUTM2EB1AL46 878 aaPredicted RBP11.08□□□□□ -0.64
MSH2-202ENST00000406134 ZNF263O14978 683 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 FCER1AP12319 257 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 KIF5BP33176 963 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 LONRF2Q1L5Z9 754 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 TRAPPC11Q7Z392 1133 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 HPS3Q969F9 1004 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 TRIM9Q9C026 710 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 THAP9Q9H5L6 903 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 SAP30BPQ9UHR5 308 aaKnown RBP11.08□□□□□ -0.64
MSH2-202ENST00000406134 PLIN4Q96Q06 1357 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 H7C1D1 291 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 NDUFA10O95299 355 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 SRGNP10124 158 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 GPSM2P81274 684 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 GRAPQ13588 217 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 FAM182BQ5T319 152 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 ANKRD40Q6AI12 368 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 CYP26C1Q6V0L0 522 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 DZIP1Q86YF9 867 aaKnown RBP11.08□□□□□ -0.64
MSH2-202ENST00000406134 ZSCAN29Q8IWY8 852 aaPredicted RBP11.08□□□□□ -0.64
MSH2-202ENST00000406134 GRAPLQ8TC17 118 aaPredicted RBP11.08□□□□□ -0.64
MSH2-202ENST00000406134 CCDC34Q96HJ3 373 aa11.08□□□□□ -0.64
MSH2-202ENST00000406134 PURBQ96QR8 312 aaKnown RBP11.08□□□□□ -0.64
MSH2-202ENST00000406134 TTF2Q9UNY4 1162 aaKnown RBP11.08□□□□□ -0.64
MSH2-202ENST00000406134 BRWD3Q6RI45 1802 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 CCDC151A5D8V7 595 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 KRT9P35527 623 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 UBXN1Q04323 297 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 MAPKAPK5Q8IW41 473 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 MTMR9Q96QG7 549 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 BLOC1S4Q9NUP1 217 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 C10orf71Q711Q0 1435 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 EPHB6O15197 1021 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 LDHBP07195 334 aaKnown RBP11.07□□□□□ -0.64
MSH2-202ENST00000406134 TPM1P09493 284 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 VSNL1P62760 191 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 VPS72Q15906 364 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms