RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 PRR12Q9ULL5 1215 aa25.37■■□□□ 1.65
EPCAM-202ENST00000405271 ZBTB5O15062 677 aa25.37■■□□□ 1.65
EPCAM-202ENST00000405271 SNAPC2Q13487 334 aa25.37■■□□□ 1.65
EPCAM-202ENST00000405271 HOMER1Q86YM7 354 aa25.37■■□□□ 1.65
EPCAM-202ENST00000405271 AIFM3Q96NN9 605 aa25.37■■□□□ 1.65
EPCAM-202ENST00000405271 SLF1Q9BQI6 1058 aa25.37■■□□□ 1.65
EPCAM-202ENST00000405271 VAT1LQ9HCJ6 419 aa25.37■■□□□ 1.65
EPCAM-202ENST00000405271 MYPNQ86TC9 1320 aa25.36■■□□□ 1.65
EPCAM-202ENST00000405271 PNMA6FA0A0J9YX94 578 aa25.36■■□□□ 1.65
EPCAM-202ENST00000405271 hCG_1642624A0A1W2PR95 340 aa25.36■■□□□ 1.65
EPCAM-202ENST00000405271 H3BQV1 296 aa25.36■■□□□ 1.65
EPCAM-202ENST00000405271 GTF2A2P52657 109 aa25.36■■□□□ 1.65
EPCAM-202ENST00000405271 CDC37Q16543 378 aaPredicted RBP25.36■■□□□ 1.65
EPCAM-202ENST00000405271 FASTKD5Q7L8L6 764 aaKnown RBP25.36■■□□□ 1.65
EPCAM-202ENST00000405271 CFHR5Q9BXR6 569 aa25.36■■□□□ 1.65
EPCAM-202ENST00000405271 R3HDMLQ9H3Y0 253 aa25.36■■□□□ 1.65
EPCAM-202ENST00000405271 SH3GLB2Q9NR46 395 aa25.36■■□□□ 1.65
EPCAM-202ENST00000405271 USP17L15C9J2P7 530 aa25.35■■□□□ 1.65
EPCAM-202ENST00000405271 USP17L13C9JLJ4 530 aa25.35■■□□□ 1.65
EPCAM-202ENST00000405271 USP17L11C9JVI0 530 aa25.35■■□□□ 1.65
EPCAM-202ENST00000405271 USP17L18D6R9N7 530 aa25.35■■□□□ 1.65
EPCAM-202ENST00000405271 USP17L22D6RA61 530 aa25.35■■□□□ 1.65
EPCAM-202ENST00000405271 USP17L17D6RBQ6 530 aa25.35■■□□□ 1.65
EPCAM-202ENST00000405271 USP17L19D6RCP7 530 aa25.35■■□□□ 1.65
EPCAM-202ENST00000405271 USP17L20D6RJB6 530 aa25.35■■□□□ 1.65
EPCAM-202ENST00000405271 FLOT1O75955 427 aa25.35■■□□□ 1.65
EPCAM-202ENST00000405271 USP17L24Q0WX57 530 aa25.35■■□□□ 1.65
EPCAM-202ENST00000405271 PRPF38AQ8NAV1 312 aaKnown RBP25.35■■□□□ 1.65
EPCAM-202ENST00000405271 FBXO18Q8NFZ0 1043 aa25.35■■□□□ 1.65
EPCAM-202ENST00000405271 PIBF1Q8WXW3 757 aa25.35■■□□□ 1.65
EPCAM-202ENST00000405271 VPS37CA5D8V6 355 aaPredicted RBP25.34■■□□□ 1.65
EPCAM-202ENST00000405271 BRD1O95696 1058 aa25.34■■□□□ 1.65
EPCAM-202ENST00000405271 FDX1P10109 184 aa25.34■■□□□ 1.65
EPCAM-202ENST00000405271 GADL1Q6ZQY3 521 aa25.34■■□□□ 1.65
EPCAM-202ENST00000405271 CCDC148Q8NFR7 591 aa25.34■■□□□ 1.65
EPCAM-202ENST00000405271 BRI3BPQ8WY22 251 aa25.34■■□□□ 1.65
EPCAM-202ENST00000405271 KIFC2Q96AC6 838 aa25.34■■□□□ 1.65
EPCAM-202ENST00000405271 RANBP17Q9H2T7 1088 aaKnown RBP25.34■■□□□ 1.65
EPCAM-202ENST00000405271 FBXO28Q9NVF7 368 aa25.34■■□□□ 1.65
EPCAM-202ENST00000405271 PPP1R9AQ9ULJ8 1098 aa25.34■■□□□ 1.65
EPCAM-202ENST00000405271 MTMR6Q9Y217 621 aa25.34■■□□□ 1.65
EPCAM-202ENST00000405271 CASP8AP2Q9UKL3 1982 aa25.34■■□□□ 1.65
EPCAM-202ENST00000405271 FOSBP53539 338 aa25.33■■□□□ 1.65
EPCAM-202ENST00000405271 PKP1Q13835 747 aa25.33■■□□□ 1.65
EPCAM-202ENST00000405271 QRICH1Q2TAL8 776 aa25.33■■□□□ 1.65
EPCAM-202ENST00000405271 OTUD7BQ6GQQ9 843 aa25.33■■□□□ 1.65
EPCAM-202ENST00000405271 CATSPERGQ6ZRH7 1159 aa25.33■■□□□ 1.65
EPCAM-202ENST00000405271 CCDC12Q8WUD4 166 aaPredicted RBP25.33■■□□□ 1.65
EPCAM-202ENST00000405271 BARHL2Q9NY43 387 aa25.33■■□□□ 1.65
EPCAM-202ENST00000405271 AGTPBP1Q9UPW5 1226 aa25.33■■□□□ 1.65
EPCAM-202ENST00000405271 CCL15-CCL14A0A0B4J2E2 113 aa25.32■■□□□ 1.64
EPCAM-202ENST00000405271 CETPP11597 493 aa25.32■■□□□ 1.64
EPCAM-202ENST00000405271 HOXA7P31268 230 aaPredicted RBP25.32■■□□□ 1.64
EPCAM-202ENST00000405271 TRAF1Q13077 416 aa25.32■■□□□ 1.64
EPCAM-202ENST00000405271 CCL15Q16663 113 aa25.32■■□□□ 1.64
EPCAM-202ENST00000405271 KRT40Q6A162 431 aa25.32■■□□□ 1.64
EPCAM-202ENST00000405271 WWC2Q6AWC2 1192 aa25.32■■□□□ 1.64
EPCAM-202ENST00000405271 PPP1R18Q6NYC8 613 aa25.32■■□□□ 1.64
EPCAM-202ENST00000405271 HEATR3Q7Z4Q2 680 aa25.32■■□□□ 1.64
EPCAM-202ENST00000405271 VPS54Q9P1Q0 977 aa25.32■■□□□ 1.64
EPCAM-202ENST00000405271 GPR25O00155 361 aa25.32■■□□□ 1.64
EPCAM-202ENST00000405271 ZSCAN22P10073 491 aaPredicted RBP25.32■■□□□ 1.64
EPCAM-202ENST00000405271 PABPC4Q13310 644 aaKnown RBP eCLIP25.32■■□□□ 1.64
EPCAM-202ENST00000405271 MOGSQ13724 837 aa25.32■■□□□ 1.64
EPCAM-202ENST00000405271 NOM1Q5C9Z4 860 aaKnown RBP25.32■■□□□ 1.64
EPCAM-202ENST00000405271 ZNF296Q8WUU4 475 aaPredicted RBP25.32■■□□□ 1.64
EPCAM-202ENST00000405271 GPKOWQ92917 476 aaPredicted RBP eCLIP25.32■■□□□ 1.64
EPCAM-202ENST00000405271 STXBP3O00186 592 aa25.31■■□□□ 1.64
EPCAM-202ENST00000405271 COG2Q14746 738 aa25.31■■□□□ 1.64
EPCAM-202ENST00000405271 TREML2Q5T2D2 321 aa25.31■■□□□ 1.64
EPCAM-202ENST00000405271 MMP1P03956 469 aa25.3■■□□□ 1.64
EPCAM-202ENST00000405271 PHF20Q9BVI0 1012 aa25.3■■□□□ 1.64
EPCAM-202ENST00000405271 AMNQ9BXJ7 453 aa25.3■■□□□ 1.64
EPCAM-202ENST00000405271 PNMA2Q9UL42 364 aa25.3■■□□□ 1.64
EPCAM-202ENST00000405271 DSG3P32926 999 aa25.29■■□□□ 1.64
EPCAM-202ENST00000405271 GUCY1B3Q02153 619 aa25.29■■□□□ 1.64
EPCAM-202ENST00000405271 FBXO11Q86XK2 927 aa25.29■■□□□ 1.64
EPCAM-202ENST00000405271 GJB4Q9NTQ9 266 aa25.29■■□□□ 1.64
EPCAM-202ENST00000405271 ZDHHC9Q9Y397 364 aa25.29■■□□□ 1.64
EPCAM-202ENST00000405271 MYH7BA7E2Y1 1941 aa25.28■■□□□ 1.64
EPCAM-202ENST00000405271 ESYT2A0FGR8 921 aa25.28■■□□□ 1.64
EPCAM-202ENST00000405271 PPP1R11O60927 126 aaPredicted RBP25.28■■□□□ 1.64
EPCAM-202ENST00000405271 F13A1P00488 732 aa25.28■■□□□ 1.64
EPCAM-202ENST00000405271 CALML3P27482 149 aa25.28■■□□□ 1.64
EPCAM-202ENST00000405271 NAPAP54920 295 aa25.28■■□□□ 1.64
EPCAM-202ENST00000405271 CRHR2Q13324 411 aa25.28■■□□□ 1.64
EPCAM-202ENST00000405271 SAFBQ15424 915 aaKnown RBP eCLIP25.28■■□□□ 1.64
EPCAM-202ENST00000405271 GALNT17Q6IS24 598 aa25.28■■□□□ 1.64
EPCAM-202ENST00000405271 FAM43AQ8N2R8 423 aa25.28■■□□□ 1.64
EPCAM-202ENST00000405271 SHISA4Q96DD7 197 aa25.28■■□□□ 1.64
EPCAM-202ENST00000405271 SLC38A10Q9HBR0 1119 aa25.28■■□□□ 1.64
EPCAM-202ENST00000405271 BRMS1Q9HCU9 246 aa25.28■■□□□ 1.64
EPCAM-202ENST00000405271 HOXC10Q9NYD6 342 aa25.28■■□□□ 1.64
EPCAM-202ENST00000405271 ADAMTS5Q9UNA0 930 aa25.28■■□□□ 1.64
EPCAM-202ENST00000405271 SLC45A1Q9Y2W3 748 aa25.28■■□□□ 1.64
EPCAM-202ENST00000405271 SAMD1Q6SPF0 538 aaPredicted RBP25.27■■□□□ 1.64
EPCAM-202ENST00000405271 SPDYE16A6NNV3 312 aaPredicted RBP25.27■■□□□ 1.64
EPCAM-202ENST00000405271 ZBED4O75132 1171 aa25.27■■□□□ 1.64
EPCAM-202ENST00000405271 OSBPP22059 807 aa25.27■■□□□ 1.64
EPCAM-202ENST00000405271 NLRP5P59047 1200 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms