RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 ADGRA1Q86SQ6 560 aa17.39■□□□□ 0.37
ATG4B-205ENST00000404914 UBAC1Q9BSL1 405 aa17.39■□□□□ 0.37
ATG4B-205ENST00000404914 CAPN11Q9UMQ6 739 aa17.39■□□□□ 0.37
ATG4B-205ENST00000404914 CCDC196A0A1B0GTZ2 297 aa17.38■□□□□ 0.37
ATG4B-205ENST00000404914 MATR3P43243 847 aaKnown RBP eCLIP17.38■□□□□ 0.375e-10■■□□□ 12.9
ATG4B-205ENST00000404914 TTMPQ5BVD1 217 aa17.38■□□□□ 0.37
ATG4B-205ENST00000404914 SUGP1Q8IWZ8 645 aaKnown RBP17.38■□□□□ 0.37
ATG4B-205ENST00000404914 ENAHQ8N8S7 591 aaPredicted RBP17.38■□□□□ 0.37
ATG4B-205ENST00000404914 PLIN2Q99541 437 aa17.38■□□□□ 0.37
ATG4B-205ENST00000404914 CAPS2Q9BXY5 557 aa17.38■□□□□ 0.37
ATG4B-205ENST00000404914 GEMIN8Q9NWZ8 242 aaKnown RBP17.38■□□□□ 0.37
ATG4B-205ENST00000404914 PP2D1A8MPX8 630 aa17.38■□□□□ 0.37
ATG4B-205ENST00000404914 PIK3AP1Q6ZUJ8 805 aa17.38■□□□□ 0.37
ATG4B-205ENST00000404914 GPATCH11Q8N954 259 aa17.38■□□□□ 0.37
ATG4B-205ENST00000404914 GJD4Q96KN9 370 aaPredicted RBP17.38■□□□□ 0.37
ATG4B-205ENST00000404914 QTRT2Q9H974 415 aaKnown RBP17.38■□□□□ 0.37
ATG4B-205ENST00000404914 CAPN6Q9Y6Q1 641 aa17.38■□□□□ 0.37
ATG4B-205ENST00000404914 TRIM28Q13263 835 aaKnown RBP17.38■□□□□ 0.37
ATG4B-205ENST00000404914 CREG2Q8IUH2 290 aa17.38■□□□□ 0.37
ATG4B-205ENST00000404914 DNAJC10Q8IXB1 793 aa17.38■□□□□ 0.37
ATG4B-205ENST00000404914 SH2D3CQ8N5H7 860 aa17.38■□□□□ 0.37
ATG4B-205ENST00000404914 NHEJ1Q9H9Q4 299 aaPredicted RBP17.38■□□□□ 0.37
ATG4B-205ENST00000404914 EIF3HO15372 352 aaKnown RBP eCLIP17.37■□□□□ 0.37
ATG4B-205ENST00000404914 HNRNPH1P31943 449 aaKnown RBP17.37■□□□□ 0.37
ATG4B-205ENST00000404914 CXCR5P32302 372 aa17.37■□□□□ 0.37
ATG4B-205ENST00000404914 NLRP10Q86W26 655 aa17.37■□□□□ 0.37
ATG4B-205ENST00000404914 ANKRD20A12PQ8NF67 263 aa17.37■□□□□ 0.37
ATG4B-205ENST00000404914 LRRC15Q8TF66 581 aa17.37■□□□□ 0.37
ATG4B-205ENST00000404914 TTYH3Q9C0H2 523 aa17.37■□□□□ 0.37
ATG4B-205ENST00000404914 DEF6Q9H4E7 631 aa17.37■□□□□ 0.37
ATG4B-205ENST00000404914 MLXIPQ9HAP2 919 aa17.37■□□□□ 0.37
ATG4B-205ENST00000404914 EBAG9O00559 213 aa17.37■□□□□ 0.37
ATG4B-205ENST00000404914 FGFR2P21802 821 aa17.37■□□□□ 0.37
ATG4B-205ENST00000404914 MAP3K12Q12852 859 aa17.37■□□□□ 0.37
ATG4B-205ENST00000404914 MEA1Q16626 185 aa17.37■□□□□ 0.37
ATG4B-205ENST00000404914 MCTP2Q6DN12 878 aa17.37■□□□□ 0.37
ATG4B-205ENST00000404914 ADSSL1Q8N142 457 aa17.37■□□□□ 0.37
ATG4B-205ENST00000404914 NCAPGQ9BPX3 1015 aa17.37■□□□□ 0.37
ATG4B-205ENST00000404914 FAM184BQ9ULE4 1060 aa17.37■□□□□ 0.37
ATG4B-205ENST00000404914 IQSEC3Q9UPP2 1182 aaPredicted RBP17.37■□□□□ 0.37
ATG4B-205ENST00000404914 DOCK2Q92608 1830 aa17.36■□□□□ 0.37
ATG4B-205ENST00000404914 PPFIA1Q13136 1202 aa17.36■□□□□ 0.37
ATG4B-205ENST00000404914 PDCLQ13371 301 aa17.36■□□□□ 0.37
ATG4B-205ENST00000404914 LRWD1Q9UFC0 647 aa17.36■□□□□ 0.37
ATG4B-205ENST00000404914 RGS17Q9UGC6 210 aaPredicted RBP17.36■□□□□ 0.37
ATG4B-205ENST00000404914 THRAP3Q9Y2W1 955 aaKnown RBP17.36■□□□□ 0.37
ATG4B-205ENST00000404914 BCORQ6W2J9 1755 aa17.36■□□□□ 0.37
ATG4B-205ENST00000404914 PDS5AQ29RF7 1337 aaKnown RBP17.36■□□□□ 0.37
ATG4B-205ENST00000404914 TOGARAM1Q9Y4F4 1720 aa17.36■□□□□ 0.37
ATG4B-205ENST00000404914 IRS4O14654 1257 aaPredicted RBP17.36■□□□□ 0.37
ATG4B-205ENST00000404914 MCM3P25205 808 aa17.36■□□□□ 0.37
ATG4B-205ENST00000404914 CKAP4Q07065 602 aaKnown RBP17.36■□□□□ 0.37
ATG4B-205ENST00000404914 NAALADL2Q58DX5 795 aa17.36■□□□□ 0.37
ATG4B-205ENST00000404914 BARGINQ6ZT62 677 aa17.36■□□□□ 0.37
ATG4B-205ENST00000404914 PCDH11XQ9BZA7 1347 aa17.36■□□□□ 0.37
ATG4B-205ENST00000404914 PCDH11YQ9BZA8 1340 aa17.36■□□□□ 0.37
ATG4B-205ENST00000404914 A0A0G2JS52 829 aa17.35■□□□□ 0.37
ATG4B-205ENST00000404914 PRPF3O43395 683 aaKnown RBP17.35■□□□□ 0.37
ATG4B-205ENST00000404914 KRT86O43790 486 aa17.35■□□□□ 0.37
ATG4B-205ENST00000404914 FAM182BQ5T319 152 aa17.35■□□□□ 0.37
ATG4B-205ENST00000404914 PURBQ96QR8 312 aaKnown RBP17.35■□□□□ 0.37
ATG4B-205ENST00000404914 SH3GL2Q99962 352 aa17.35■□□□□ 0.37
ATG4B-205ENST00000404914 UQCRFS1P1P0C7P4 283 aa17.35■□□□□ 0.37
ATG4B-205ENST00000404914 BCAMP50895 628 aa17.35■□□□□ 0.37
ATG4B-205ENST00000404914 KCTD16Q68DU8 428 aa17.35■□□□□ 0.37
ATG4B-205ENST00000404914 NFRKBQ6P4R8 1299 aa17.35■□□□□ 0.37
ATG4B-205ENST00000404914 ANKRD18AQ8IVF6 992 aa17.35■□□□□ 0.37
ATG4B-205ENST00000404914 TRPC5Q9UL62 973 aaPredicted RBP17.35■□□□□ 0.37
ATG4B-205ENST00000404914 BAZ2AQ9UIF9 1905 aaKnown RBP17.34■□□□□ 0.37
ATG4B-205ENST00000404914 H7C1D1 291 aa17.34■□□□□ 0.37
ATG4B-205ENST00000404914 ATP1A2P50993 1020 aa17.34■□□□□ 0.37
ATG4B-205ENST00000404914 MYO1FO00160 1098 aa17.34■□□□□ 0.37
ATG4B-205ENST00000404914 NCK2O43639 380 aa17.34■□□□□ 0.37
ATG4B-205ENST00000404914 NMT2O60551 498 aa17.34■□□□□ 0.37
ATG4B-205ENST00000404914 PPARDQ03181 441 aa17.34■□□□□ 0.37
ATG4B-205ENST00000404914 PUM3Q15397 648 aaKnown RBP17.34■□□□□ 0.37
ATG4B-205ENST00000404914 DDB1Q16531 1140 aa17.34■□□□□ 0.37
ATG4B-205ENST00000404914 TNS2Q63HR2 1409 aa17.34■□□□□ 0.37
ATG4B-205ENST00000404914 LPIN2Q92539 896 aa17.34■□□□□ 0.37
ATG4B-205ENST00000404914 RPGRIP1Q96KN7 1286 aa17.34■□□□□ 0.37
ATG4B-205ENST00000404914 TRIM47Q96LD4 638 aa17.34■□□□□ 0.37
ATG4B-205ENST00000404914 MYH3P11055 1940 aa17.34■□□□□ 0.37
ATG4B-205ENST00000404914 A0A1W2PQC6 194 aa17.34■□□□□ 0.37
ATG4B-205ENST00000404914 MOCS3O95396 460 aa17.34■□□□□ 0.37
ATG4B-205ENST00000404914 TRIM21P19474 475 aaKnown RBP17.34■□□□□ 0.37
ATG4B-205ENST00000404914 KRT83P78385 493 aa17.34■□□□□ 0.37
ATG4B-205ENST00000404914 KIF6Q6ZMV9 814 aa17.34■□□□□ 0.37
ATG4B-205ENST00000404914 TMTC2Q8N394 836 aa17.34■□□□□ 0.37
ATG4B-205ENST00000404914 SRBD1Q8N5C6 995 aaKnown RBP17.34■□□□□ 0.37
ATG4B-205ENST00000404914 RASGRP4Q8TDF6 673 aa17.34■□□□□ 0.37
ATG4B-205ENST00000404914 DUSP9Q99956 384 aaKnown RBP17.34■□□□□ 0.37
ATG4B-205ENST00000404914 SNX12Q9UMY4 172 aa17.34■□□□□ 0.37
ATG4B-205ENST00000404914 KLRC4O43908 158 aa17.33■□□□□ 0.36
ATG4B-205ENST00000404914 SRGNP10124 158 aa17.33■□□□□ 0.36
ATG4B-205ENST00000404914 XBP1P17861 261 aa17.33■□□□□ 0.36
ATG4B-205ENST00000404914 TROAPQ12815 778 aa17.33■□□□□ 0.36
ATG4B-205ENST00000404914 MARCH10Q8NA82 808 aaPredicted RBP17.33■□□□□ 0.36
ATG4B-205ENST00000404914 SPATA4Q8NEY3 305 aa17.33■□□□□ 0.36
ATG4B-205ENST00000404914 NACAP1Q9BZK3 213 aa17.33■□□□□ 0.36
ATG4B-205ENST00000404914 ASAP1Q9ULH1 1129 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms