RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 GPCPD1Q9NPB8 672 aa24.12■■□□□ 1.45
TPM1-208ENST00000404484 BARHL2Q9NY43 387 aa24.12■■□□□ 1.45
TPM1-208ENST00000404484 F5H6K3 240 aa24.12■■□□□ 1.45
TPM1-208ENST00000404484 IRF6O14896 467 aa24.12■■□□□ 1.45
TPM1-208ENST00000404484 GADD45BO75293 160 aaPredicted RBP24.12■■□□□ 1.45
TPM1-208ENST00000404484 KLRC3Q07444 240 aa24.12■■□□□ 1.45
TPM1-208ENST00000404484 HEATR3Q7Z4Q2 680 aa24.12■■□□□ 1.45
TPM1-208ENST00000404484 KCNG4Q8TDN1 519 aa24.12■■□□□ 1.45
TPM1-208ENST00000404484 SAGE1Q9NXZ1 904 aa24.12■■□□□ 1.45
TPM1-208ENST00000404484 CTNND1O60716 968 aaKnown RBP24.11■■□□□ 1.45
TPM1-208ENST00000404484 NASPP49321 788 aaPredicted RBP24.11■■□□□ 1.45
TPM1-208ENST00000404484 RILPL1Q5EBL4 403 aa24.11■■□□□ 1.45
TPM1-208ENST00000404484 PRDM10Q9NQV6 1147 aa24.11■■□□□ 1.45
TPM1-208ENST00000404484 TMX2Q9Y320 296 aa24.11■■□□□ 1.45
TPM1-208ENST00000404484 RAD21O60216 631 aa24.1■■□□□ 1.45
TPM1-208ENST00000404484 NDUFB10O96000 172 aa24.1■■□□□ 1.45
TPM1-208ENST00000404484 PPATQ06203 517 aa24.1■■□□□ 1.45
TPM1-208ENST00000404484 STK38Q15208 465 aa24.1■■□□□ 1.45
TPM1-208ENST00000404484 ANO1Q5XXA6 986 aa24.1■■□□□ 1.45
TPM1-208ENST00000404484 WWC2Q6AWC2 1192 aa24.1■■□□□ 1.45
TPM1-208ENST00000404484 IFNL1Q8IU54 200 aa24.1■■□□□ 1.45
TPM1-208ENST00000404484 SCYL3Q8IZE3 742 aa24.1■■□□□ 1.45
TPM1-208ENST00000404484 PTPN18Q99952 460 aa24.1■■□□□ 1.45
TPM1-208ENST00000404484 UBA5Q9GZZ9 404 aa24.1■■□□□ 1.45
TPM1-208ENST00000404484 ISY1Q9ULR0 285 aaKnown RBP24.1■■□□□ 1.45
TPM1-208ENST00000404484 TESPA1A2RU30 521 aaPredicted RBP24.09■■□□□ 1.45
TPM1-208ENST00000404484 STXBP3O00186 592 aa24.09■■□□□ 1.45
TPM1-208ENST00000404484 IGF2BP3O00425 579 aaKnown RBP eCLIP24.09■■□□□ 1.45
TPM1-208ENST00000404484 CEBPZQ03701 1054 aaKnown RBP24.09■■□□□ 1.45
TPM1-208ENST00000404484 PPIL2Q13356 520 aa24.09■■□□□ 1.45
TPM1-208ENST00000404484 HOMER1Q86YM7 354 aa24.09■■□□□ 1.45
TPM1-208ENST00000404484 SHISA4Q96DD7 197 aa24.09■■□□□ 1.45
TPM1-208ENST00000404484 BMP3P12645 472 aa24.08■■□□□ 1.45
TPM1-208ENST00000404484 GTF2A2P52657 109 aa24.08■■□□□ 1.45
TPM1-208ENST00000404484 SF3A1Q15459 793 aaKnown RBP24.08■■□□□ 1.45
TPM1-208ENST00000404484 KCTD1Q719H9 257 aa24.08■■□□□ 1.45
TPM1-208ENST00000404484 DAGLBQ8NCG7 672 aa24.08■■□□□ 1.45
TPM1-208ENST00000404484 GPKOWQ92917 476 aaPredicted RBP eCLIP24.08■■□□□ 1.45
TPM1-208ENST00000404484 PIGSQ96S52 555 aa24.08■■□□□ 1.45
TPM1-208ENST00000404484 CPVLQ9H3G5 476 aa24.08■■□□□ 1.45
TPM1-208ENST00000404484 VAT1LQ9HCJ6 419 aa24.08■■□□□ 1.45
TPM1-208ENST00000404484 NOL7Q9UMY1 257 aaKnown RBP24.08■■□□□ 1.45
TPM1-208ENST00000404484 PCDHA4Q9UN74 947 aa24.08■■□□□ 1.45
TPM1-208ENST00000404484 ATAD5Q96QE3 1844 aa24.08■■□□□ 1.44
TPM1-208ENST00000404484 PNMA6FA0A0J9YX94 578 aa24.08■■□□□ 1.44
TPM1-208ENST00000404484 PTPRAP18433 802 aa24.08■■□□□ 1.44
TPM1-208ENST00000404484 NAPAP54920 295 aa24.08■■□□□ 1.44
TPM1-208ENST00000404484 NR5A1Q13285 461 aa24.08■■□□□ 1.44
TPM1-208ENST00000404484 PPP1R18Q6NYC8 613 aa24.08■■□□□ 1.44
TPM1-208ENST00000404484 CAVIN1Q6NZI2 390 aaKnown RBP24.08■■□□□ 1.44
TPM1-208ENST00000404484 ADGRF4Q8IZF3 695 aa24.08■■□□□ 1.44
TPM1-208ENST00000404484 LINC00301Q8NCQ3 95 aa24.08■■□□□ 1.44
TPM1-208ENST00000404484 OXER1Q8TDS5 423 aa24.08■■□□□ 1.44
TPM1-208ENST00000404484 BRI3BPQ8WY22 251 aa24.08■■□□□ 1.44
TPM1-208ENST00000404484 A0A1W2PRG0 241 aa24.07■■□□□ 1.44
TPM1-208ENST00000404484 TBC1D8O95759 1140 aa24.07■■□□□ 1.44
TPM1-208ENST00000404484 NPY5RQ15761 445 aa24.07■■□□□ 1.44
TPM1-208ENST00000404484 BLIDQ8IZY5 108 aa24.07■■□□□ 1.44
TPM1-208ENST00000404484 FTOQ9C0B1 505 aaKnown RBP eCLIP24.07■■□□□ 1.44
TPM1-208ENST00000404484 GZF1Q9H116 711 aaPredicted RBP24.07■■□□□ 1.44
TPM1-208ENST00000404484 JMJD4Q9H9V9 463 aa24.07■■□□□ 1.44
TPM1-208ENST00000404484 PICK1Q9NRD5 415 aa24.07■■□□□ 1.44
TPM1-208ENST00000404484 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.07■■□□□ 1.44
TPM1-208ENST00000404484 CEP131Q9UPN4 1083 aa24.07■■□□□ 1.44
TPM1-208ENST00000404484 CLIC4Q9Y696 253 aa24.07■■□□□ 1.44
TPM1-208ENST00000404484 ZHX2Q9Y6X8 837 aa24.07■■□□□ 1.44
TPM1-208ENST00000404484 CCL15-CCL14A0A0B4J2E2 113 aa24.06■■□□□ 1.44
TPM1-208ENST00000404484 ESYT2A0FGR8 921 aa24.06■■□□□ 1.44
TPM1-208ENST00000404484 GNA11P29992 359 aa24.06■■□□□ 1.44
TPM1-208ENST00000404484 CCL15Q16663 113 aa24.06■■□□□ 1.44
TPM1-208ENST00000404484 TTBK2Q6IQ55 1244 aa24.06■■□□□ 1.44
TPM1-208ENST00000404484 MTMR8Q96EF0 704 aa24.06■■□□□ 1.44
TPM1-208ENST00000404484 VCPKMTQ9H867 229 aa24.06■■□□□ 1.44
TPM1-208ENST00000404484 C6orf50Q9HD87 102 aa24.06■■□□□ 1.44
TPM1-208ENST00000404484 ZBTB5O15062 677 aa24.05■■□□□ 1.44
TPM1-208ENST00000404484 SPTLC2O15270 562 aa24.05■■□□□ 1.44
TPM1-208ENST00000404484 ME1P48163 572 aa24.05■■□□□ 1.44
TPM1-208ENST00000404484 SNAPC2Q13487 334 aa24.05■■□□□ 1.44
TPM1-208ENST00000404484 GSE1Q14687 1217 aa24.05■■□□□ 1.44
TPM1-208ENST00000404484 BICD2Q8TD16 824 aa24.05■■□□□ 1.44
TPM1-208ENST00000404484 ACER1Q8TDN7 264 aa24.05■■□□□ 1.44
TPM1-208ENST00000404484 TNFRSF25Q93038 417 aa24.05■■□□□ 1.44
TPM1-208ENST00000404484 ZMYND12Q9H0C1 365 aa24.05■■□□□ 1.44
TPM1-208ENST00000404484 R3HDMLQ9H3Y0 253 aa24.05■■□□□ 1.44
TPM1-208ENST00000404484 ALDH1A1P00352 501 aa24.04■■□□□ 1.44
TPM1-208ENST00000404484 TRAPPC10P48553 1259 aa24.04■■□□□ 1.44
TPM1-208ENST00000404484 SLC39A14Q15043 492 aa24.04■■□□□ 1.44
TPM1-208ENST00000404484 BTNL9Q6UXG8 535 aa24.04■■□□□ 1.44
TPM1-208ENST00000404484 KCNH4Q9UQ05 1017 aa24.04■■□□□ 1.44
TPM1-208ENST00000404484 PPP6R2O75170 966 aa24.03■■□□□ 1.44
TPM1-208ENST00000404484 BMP15O95972 392 aa24.03■■□□□ 1.44
TPM1-208ENST00000404484 CETPP11597 493 aa24.03■■□□□ 1.44
TPM1-208ENST00000404484 IKQ13123 557 aaPredicted RBP24.03■■□□□ 1.44
TPM1-208ENST00000404484 CCDC84Q86UT8 332 aaPredicted RBP24.03■■□□□ 1.44
TPM1-208ENST00000404484 FEZ1Q99689 392 aa24.03■■□□□ 1.44
TPM1-208ENST00000404484 AFG3L2Q9Y4W6 797 aa24.03■■□□□ 1.44
TPM1-208ENST00000404484 DOCK1Q14185 1865 aa24.03■■□□□ 1.44
TPM1-208ENST00000404484 SLC16A2P36021 539 aa24.03■■□□□ 1.44
TPM1-208ENST00000404484 SYDE2Q5VT97 1194 aa24.03■■□□□ 1.44
TPM1-208ENST00000404484 TYW1BQ6NUM6 668 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms