RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 RARBP10826 455 aa18.15■□□□□ 0.5
TPM1-207ENST00000403994 AKR1A1P14550 325 aa18.15■□□□□ 0.5
TPM1-207ENST00000403994 BMP8BP34820 402 aa18.15■□□□□ 0.5
TPM1-207ENST00000403994 CCDC96Q2M329 555 aa18.15■□□□□ 0.5
TPM1-207ENST00000403994 MAMDC4Q6UXC1 1216 aa18.15■□□□□ 0.5
TPM1-207ENST00000403994 ZNF467Q7Z7K2 595 aaPredicted RBP18.15■□□□□ 0.5
TPM1-207ENST00000403994 ANKRD35Q8N283 1001 aa18.15■□□□□ 0.5
TPM1-207ENST00000403994 DCAF4Q8WV16 495 aa18.15■□□□□ 0.5
TPM1-207ENST00000403994 ACAD9Q9H845 621 aa18.15■□□□□ 0.5
TPM1-207ENST00000403994 XPNPEP3Q9NQH7 507 aa18.15■□□□□ 0.5
TPM1-207ENST00000403994 MTMR7Q9Y216 660 aa18.15■□□□□ 0.5
TPM1-207ENST00000403994 MYCNP04198 464 aaPredicted RBP18.14■□□□□ 0.49
TPM1-207ENST00000403994 PCP11498 1178 aaKnown RBP18.14■□□□□ 0.49
TPM1-207ENST00000403994 RTP1P59025 263 aa18.14■□□□□ 0.49
TPM1-207ENST00000403994 AKNAD1Q5T1N1 836 aa18.14■□□□□ 0.49
TPM1-207ENST00000403994 RCSD1Q6JBY9 416 aa18.14■□□□□ 0.49
TPM1-207ENST00000403994 CWC27Q6UX04 472 aaKnown RBP18.14■□□□□ 0.49
TPM1-207ENST00000403994 AGBL1Q96MI9 1066 aa18.14■□□□□ 0.49
TPM1-207ENST00000403994 RNF146Q9NTX7 359 aa18.14■□□□□ 0.49
TPM1-207ENST00000403994 SOX1O00570 391 aaPredicted RBP18.13■□□□□ 0.49
TPM1-207ENST00000403994 SNAI1O95863 264 aaPredicted RBP18.13■□□□□ 0.49
TPM1-207ENST00000403994 TOP1P11387 765 aaKnown RBP18.13■□□□□ 0.49
TPM1-207ENST00000403994 SNX17Q15036 470 aa18.13■□□□□ 0.49
TPM1-207ENST00000403994 MFSD6Q6ZSS7 791 aa18.13■□□□□ 0.49
TPM1-207ENST00000403994 TMEM47Q9BQJ4 181 aa18.13■□□□□ 0.49
TPM1-207ENST00000403994 A1CFQ9NQ94 594 aaKnown RBP18.13■□□□□ 0.49
TPM1-207ENST00000403994 TCP11L1Q9NUJ3 509 aa18.13■□□□□ 0.49
TPM1-207ENST00000403994 ZHX1Q9UKY1 873 aaPredicted RBP18.13■□□□□ 0.49
TPM1-207ENST00000403994 PRR12Q9ULL5 1215 aa18.13■□□□□ 0.49
TPM1-207ENST00000403994 HIP1O00291 1037 aa18.12■□□□□ 0.49
TPM1-207ENST00000403994 PGK1P00558 417 aa18.12■□□□□ 0.49
TPM1-207ENST00000403994 PDE4AP27815 886 aa18.12■□□□□ 0.49
TPM1-207ENST00000403994 ADCYAP1R1P41586 468 aa18.12■□□□□ 0.49
TPM1-207ENST00000403994 SNAP25P60880 206 aa18.12■□□□□ 0.49
TPM1-207ENST00000403994 IRX6P78412 446 aaPredicted RBP18.12■□□□□ 0.49
TPM1-207ENST00000403994 CCDC174Q6PII3 467 aa18.12■□□□□ 0.49
TPM1-207ENST00000403994 ATP11BQ9Y2G3 1177 aa18.12■□□□□ 0.49
TPM1-207ENST00000403994 SYNRGQ9UMZ2 1314 aa18.12■□□□□ 0.49
TPM1-207ENST00000403994 ADAMTS4O75173 837 aa18.11■□□□□ 0.49
TPM1-207ENST00000403994 ALAS1P13196 640 aa18.11■□□□□ 0.49
TPM1-207ENST00000403994 GSPT1P15170 499 aaKnown RBP18.11■□□□□ 0.49
TPM1-207ENST00000403994 CNTN2Q02246 1040 aa18.11■□□□□ 0.49
TPM1-207ENST00000403994 TKFCQ3LXA3 575 aa18.11■□□□□ 0.49
TPM1-207ENST00000403994 ARMCX2Q7L311 632 aa18.11■□□□□ 0.49
TPM1-207ENST00000403994 FAM133AQ8N9E0 248 aa18.11■□□□□ 0.49
TPM1-207ENST00000403994 FERMT2Q96AC1 680 aa18.11■□□□□ 0.49
TPM1-207ENST00000403994 RNF41Q9H4P4 317 aaPredicted RBP18.11■□□□□ 0.49
TPM1-207ENST00000403994 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.11■□□□□ 0.49
TPM1-207ENST00000403994 PHF24Q9UPV7 400 aa18.11■□□□□ 0.49
TPM1-207ENST00000403994 FRMPD2Q68DX3 1309 aaPredicted RBP18.11■□□□□ 0.49
TPM1-207ENST00000403994 ADCY6O43306 1168 aa18.1■□□□□ 0.49
TPM1-207ENST00000403994 PDHBP11177 359 aa18.1■□□□□ 0.49
TPM1-207ENST00000403994 MDM2Q00987 491 aaPredicted RBP18.1■□□□□ 0.49
TPM1-207ENST00000403994 TRIM60Q495X7 471 aa18.1■□□□□ 0.49
TPM1-207ENST00000403994 MUM1L1Q5H9M0 696 aa18.1■□□□□ 0.49
TPM1-207ENST00000403994 TTBK2Q6IQ55 1244 aa18.1■□□□□ 0.49
TPM1-207ENST00000403994 BTNL9Q6UXG8 535 aa18.1■□□□□ 0.49
TPM1-207ENST00000403994 SLC39A5Q6ZMH5 540 aa18.1■□□□□ 0.49
TPM1-207ENST00000403994 RNF180Q86T96 592 aa18.1■□□□□ 0.49
TPM1-207ENST00000403994 TDHQ8IZJ6 230 aa18.1■□□□□ 0.49
TPM1-207ENST00000403994 ESR2Q92731 530 aa18.1■□□□□ 0.49
TPM1-207ENST00000403994 TRERF1Q96PN7 1200 aa18.1■□□□□ 0.49
TPM1-207ENST00000403994 DSCC1Q9BVC3 393 aa18.1■□□□□ 0.49
TPM1-207ENST00000403994 UBE2OQ9C0C9 1292 aaKnown RBP18.1■□□□□ 0.49
TPM1-207ENST00000403994 IL25Q9H293 177 aa18.1■□□□□ 0.49
TPM1-207ENST00000403994 RANBP17Q9H2T7 1088 aaKnown RBP18.1■□□□□ 0.49
TPM1-207ENST00000403994 CCPG1Q9ULG6 757 aa18.1■□□□□ 0.49
TPM1-207ENST00000403994 ASTN1O14525 1302 aa18.09■□□□□ 0.49
TPM1-207ENST00000403994 A0A1W2PQ45 241 aaPredicted RBP18.09■□□□□ 0.49
TPM1-207ENST00000403994 A0A1W2PQY0 241 aa18.09■□□□□ 0.49
TPM1-207ENST00000403994 POTEB2H3BUK9 544 aa18.09■□□□□ 0.49
TPM1-207ENST00000403994 ZNF213O14771 459 aa18.09■□□□□ 0.49
TPM1-207ENST00000403994 ICAM1P05362 532 aa18.09■□□□□ 0.49
TPM1-207ENST00000403994 SLC16A2P36021 539 aa18.09■□□□□ 0.49
TPM1-207ENST00000403994 ACVR2BQ13705 512 aa18.09■□□□□ 0.49
TPM1-207ENST00000403994 TTC22Q5TAA0 569 aa18.09■□□□□ 0.49
TPM1-207ENST00000403994 SYDE2Q5VT97 1194 aa18.09■□□□□ 0.49
TPM1-207ENST00000403994 C1orf53Q5VUE5 145 aa18.09■□□□□ 0.49
TPM1-207ENST00000403994 CCDC144CPQ8IYA2 1237 aa18.09■□□□□ 0.49
TPM1-207ENST00000403994 LRCH3Q96II8 777 aa18.09■□□□□ 0.49
TPM1-207ENST00000403994 KATNBL1Q9H079 304 aa18.09■□□□□ 0.49
TPM1-207ENST00000403994 ABHD16BQ9H3Z7 469 aa18.09■□□□□ 0.49
TPM1-207ENST00000403994 FAM184BQ9ULE4 1060 aa18.09■□□□□ 0.49
TPM1-207ENST00000403994 SNHG28P0DPA3 235 aa18.08■□□□□ 0.48
TPM1-207ENST00000403994 GPCPD1Q9NPB8 672 aa18.08■□□□□ 0.48
TPM1-207ENST00000403994 PDLIM7Q9NR12 457 aa18.08■□□□□ 0.48
TPM1-207ENST00000403994 CYP39A1Q9NYL5 469 aa18.08■□□□□ 0.48
TPM1-207ENST00000403994 RAD50Q92878 1312 aa18.07■□□□□ 0.48
TPM1-207ENST00000403994 MYADML2A6NDP7 307 aa18.07■□□□□ 0.48
TPM1-207ENST00000403994 SOWAHBA6NEL2 793 aa18.07■□□□□ 0.48
TPM1-207ENST00000403994 KDM4AO75164 1064 aa18.07■□□□□ 0.48
TPM1-207ENST00000403994 DUSP11O75319 330 aaKnown RBP18.07■□□□□ 0.48
TPM1-207ENST00000403994 NT5C2P49902 561 aa18.07■□□□□ 0.48
TPM1-207ENST00000403994 ZNF543Q08ER8 600 aa18.07■□□□□ 0.48
TPM1-207ENST00000403994 CCDC144BQ3MJ40 725 aa18.07■□□□□ 0.48
TPM1-207ENST00000403994 TTC14Q96N46 770 aa18.07■□□□□ 0.48
TPM1-207ENST00000403994 ZKSCAN3Q9BRR0 538 aa18.07■□□□□ 0.48
TPM1-207ENST00000403994 PRKAG2Q9UGJ0 569 aa18.07■□□□□ 0.48
TPM1-207ENST00000403994 MYH6P13533 1939 aa18.07■□□□□ 0.48
TPM1-207ENST00000403994 CST5P28325 142 aaPredicted RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms