RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 SSC5DA1L4H1 1573 aa18.12■□□□□ 0.49
CHRFAM7A-203ENST00000401522 LONRF3Q496Y0 759 aa18.12■□□□□ 0.49
CHRFAM7A-203ENST00000401522 DIS3L2Q8IYB7 885 aaKnown RBP18.12■□□□□ 0.49
CHRFAM7A-203ENST00000401522 PHF20L1A8MW92 1017 aa18.11■□□□□ 0.49
CHRFAM7A-203ENST00000401522 UBASH3AP57075 661 aa18.11■□□□□ 0.49
CHRFAM7A-203ENST00000401522 TFAP4Q01664 338 aa18.11■□□□□ 0.49
CHRFAM7A-203ENST00000401522 CERKLQ49MI3 558 aaPredicted RBP18.11■□□□□ 0.49
CHRFAM7A-203ENST00000401522 ISM2Q6H9L7 571 aa18.11■□□□□ 0.49
CHRFAM7A-203ENST00000401522 ZNF579Q8NAF0 562 aaKnown RBP18.11■□□□□ 0.49
CHRFAM7A-203ENST00000401522 ERO1AQ96HE7 468 aa18.11■□□□□ 0.49
CHRFAM7A-203ENST00000401522 PPP1R13BQ96KQ4 1090 aa18.11■□□□□ 0.49
CHRFAM7A-203ENST00000401522 BTBD18B2RXH4 712 aa18.11■□□□□ 0.49
CHRFAM7A-203ENST00000401522 SERPINC1P01008 464 aa18.11■□□□□ 0.49
CHRFAM7A-203ENST00000401522 ATP1A3P13637 1013 aa18.11■□□□□ 0.49
CHRFAM7A-203ENST00000401522 PTPREP23469 700 aa18.11■□□□□ 0.49
CHRFAM7A-203ENST00000401522 PPP2R5BQ15173 497 aa18.11■□□□□ 0.49
CHRFAM7A-203ENST00000401522 FAM47AQ5JRC9 791 aa18.11■□□□□ 0.49
CHRFAM7A-203ENST00000401522 ZNF341Q9BYN7 854 aa18.11■□□□□ 0.49
CHRFAM7A-203ENST00000401522 ZNF112Q9UJU3 913 aa18.11■□□□□ 0.49
CHRFAM7A-203ENST00000401522 FBXO2Q9UK22 296 aaPredicted RBP18.11■□□□□ 0.49
CHRFAM7A-203ENST00000401522 CEP131Q9UPN4 1083 aa18.11■□□□□ 0.49
CHRFAM7A-203ENST00000401522 TSPY2A6NKD2 308 aa18.1■□□□□ 0.49
CHRFAM7A-203ENST00000401522 ITGBL1O95965 494 aaPredicted RBP18.1■□□□□ 0.49
CHRFAM7A-203ENST00000401522 TSPY3P0CV98 308 aa18.1■□□□□ 0.49
CHRFAM7A-203ENST00000401522 TSPY8P0CW00 308 aa18.1■□□□□ 0.49
CHRFAM7A-203ENST00000401522 GUCY1A2P33402 732 aa18.1■□□□□ 0.49
CHRFAM7A-203ENST00000401522 NF2P35240 595 aa18.1■□□□□ 0.49
CHRFAM7A-203ENST00000401522 TOB1P50616 345 aaPredicted RBP18.1■□□□□ 0.49
CHRFAM7A-203ENST00000401522 MDM2Q00987 491 aaPredicted RBP18.1■□□□□ 0.49
CHRFAM7A-203ENST00000401522 RRP1BQ14684 758 aaKnown RBP18.1■□□□□ 0.49
CHRFAM7A-203ENST00000401522 NEDD1Q8NHV4 660 aa18.1■□□□□ 0.49
CHRFAM7A-203ENST00000401522 PCDHA5Q9Y5H7 936 aa18.1■□□□□ 0.49
CHRFAM7A-203ENST00000401522 MYH8P13535 1937 aa18.1■□□□□ 0.49
CHRFAM7A-203ENST00000401522 UBE2Q2LH0YL09 131 aa18.1■□□□□ 0.49
CHRFAM7A-203ENST00000401522 ZNF654Q8IZM8 581 aa18.1■□□□□ 0.49
CHRFAM7A-203ENST00000401522 ZNF784Q8NCA9 323 aaPredicted RBP18.1■□□□□ 0.49
CHRFAM7A-203ENST00000401522 UBAC1Q9BSL1 405 aa18.1■□□□□ 0.49
CHRFAM7A-203ENST00000401522 TCP11L1Q9NUJ3 509 aa18.1■□□□□ 0.49
CHRFAM7A-203ENST00000401522 DACH1Q9UI36 760 aa18.1■□□□□ 0.49
CHRFAM7A-203ENST00000401522 MORC2Q9Y6X9 1032 aaPredicted RBP18.1■□□□□ 0.49
CHRFAM7A-203ENST00000401522 TRAF5O00463 557 aa18.09■□□□□ 0.49
CHRFAM7A-203ENST00000401522 PPP1R12BO60237 982 aaPredicted RBP18.09■□□□□ 0.49
CHRFAM7A-203ENST00000401522 USP2O75604 605 aaPredicted RBP18.09■□□□□ 0.49
CHRFAM7A-203ENST00000401522 SLU7O95391 586 aaKnown RBP18.09■□□□□ 0.49
CHRFAM7A-203ENST00000401522 AKR1B1P15121 316 aa18.09■□□□□ 0.49
CHRFAM7A-203ENST00000401522 CAP2P40123 477 aa18.09■□□□□ 0.49
CHRFAM7A-203ENST00000401522 CBX1P83916 185 aa18.09■□□□□ 0.49
CHRFAM7A-203ENST00000401522 IQCA1Q86XH1 822 aa18.09■□□□□ 0.49
CHRFAM7A-203ENST00000401522 VSTM4Q8IW00 320 aa18.09■□□□□ 0.49
CHRFAM7A-203ENST00000401522 FANCBQ8NB91 859 aa18.09■□□□□ 0.49
CHRFAM7A-203ENST00000401522 KLRG1Q96E93 195 aa18.09■□□□□ 0.49
CHRFAM7A-203ENST00000401522 ZNF215Q9UL58 517 aaPredicted RBP18.09■□□□□ 0.49
CHRFAM7A-203ENST00000401522 KCNJ14Q9UNX9 436 aa18.09■□□□□ 0.49
CHRFAM7A-203ENST00000401522 PLIN4Q96Q06 1357 aa18.09■□□□□ 0.49
CHRFAM7A-203ENST00000401522 CTNND1O60716 968 aaKnown RBP18.08■□□□□ 0.49
CHRFAM7A-203ENST00000401522 POSTNQ15063 836 aa18.08■□□□□ 0.49
CHRFAM7A-203ENST00000401522 ABCB5Q2M3G0 1257 aa18.08■□□□□ 0.49
CHRFAM7A-203ENST00000401522 NT5DC1Q5TFE4 455 aa18.08■□□□□ 0.49
CHRFAM7A-203ENST00000401522 KANK3Q6NY19 840 aa18.08■□□□□ 0.49
CHRFAM7A-203ENST00000401522 ZKSCAN3Q9BRR0 538 aa18.08■□□□□ 0.49
CHRFAM7A-203ENST00000401522 IL17RBQ9NRM6 502 aa18.08■□□□□ 0.49
CHRFAM7A-203ENST00000401522 TRIML1Q8N9V2 468 aa18.08■□□□□ 0.48
CHRFAM7A-203ENST00000401522 MLKLQ8NB16 471 aa18.08■□□□□ 0.48
CHRFAM7A-203ENST00000401522 ZSCAN10Q96SZ4 725 aaPredicted RBP18.08■□□□□ 0.48
CHRFAM7A-203ENST00000401522 RNF26Q9BY78 433 aaPredicted RBP18.08■□□□□ 0.48
CHRFAM7A-203ENST00000401522 L2HGDHQ9H9P8 463 aa18.08■□□□□ 0.48
CHRFAM7A-203ENST00000401522 OGFRQ9NZT2 677 aa18.08■□□□□ 0.48
CHRFAM7A-203ENST00000401522 MAN1B1Q9UKM7 699 aa18.08■□□□□ 0.48
CHRFAM7A-203ENST00000401522 SRPRBQ9Y5M8 271 aaKnown RBP18.08■□□□□ 0.48
CHRFAM7A-203ENST00000401522 IGKV6D-41A0A0C4DH26 115 aa18.07■□□□□ 0.48
CHRFAM7A-203ENST00000401522 TOMM70O94826 608 aa18.07■□□□□ 0.48
CHRFAM7A-203ENST00000401522 JAG1P78504 1218 aa18.07■□□□□ 0.48
CHRFAM7A-203ENST00000401522 CCDC178Q5BJE1 867 aa18.07■□□□□ 0.48
CHRFAM7A-203ENST00000401522 TMEM179Q6ZVK1 233 aa18.07■□□□□ 0.48
CHRFAM7A-203ENST00000401522 FCHSD1Q86WN1 690 aa18.07■□□□□ 0.48
CHRFAM7A-203ENST00000401522 ZNF397Q8NF99 534 aaPredicted RBP18.07■□□□□ 0.48
CHRFAM7A-203ENST00000401522 TMX1Q9H3N1 280 aa18.07■□□□□ 0.48
CHRFAM7A-203ENST00000401522 CABP5Q9NP86 173 aa18.07■□□□□ 0.48
CHRFAM7A-203ENST00000401522 GINM1Q9NU53 330 aa18.07■□□□□ 0.48
CHRFAM7A-203ENST00000401522 FANCLQ9NW38 375 aa18.07■□□□□ 0.48
CHRFAM7A-203ENST00000401522 FZD1Q9UP38 647 aa18.07■□□□□ 0.48
CHRFAM7A-203ENST00000401522 MPHOSPH10O00566 681 aaKnown RBP18.06■□□□□ 0.48
CHRFAM7A-203ENST00000401522 GDF11O95390 407 aa18.06■□□□□ 0.48
CHRFAM7A-203ENST00000401522 TOP1P11387 765 aaKnown RBP18.06■□□□□ 0.48
CHRFAM7A-203ENST00000401522 XBP1P17861 261 aa18.06■□□□□ 0.48
CHRFAM7A-203ENST00000401522 NOVP48745 357 aa18.06■□□□□ 0.48
CHRFAM7A-203ENST00000401522 FMR1Q06787 632 aaKnown RBP eCLIP18.06■□□□□ 0.48
CHRFAM7A-203ENST00000401522 NAA30Q147X3 362 aaPredicted RBP18.06■□□□□ 0.48
CHRFAM7A-203ENST00000401522 SEC23AQ15436 765 aa18.06■□□□□ 0.48
CHRFAM7A-203ENST00000401522 SMC1BQ8NDV3 1235 aa18.06■□□□□ 0.48
CHRFAM7A-203ENST00000401522 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.06■□□□□ 0.48
CHRFAM7A-203ENST00000401522 WRNIP1Q96S55 665 aa18.06■□□□□ 0.48
CHRFAM7A-203ENST00000401522 GREB1LQ9C091 1923 aaPredicted RBP18.06■□□□□ 0.48
CHRFAM7A-203ENST00000401522 NMT2O60551 498 aa18.06■□□□□ 0.48
CHRFAM7A-203ENST00000401522 GH2P01242 217 aa18.06■□□□□ 0.48
CHRFAM7A-203ENST00000401522 BMP6P22004 513 aa18.06■□□□□ 0.48
CHRFAM7A-203ENST00000401522 SARSP49591 514 aaKnown RBP18.06■□□□□ 0.48
CHRFAM7A-203ENST00000401522 AKAP17AQ02040 695 aaKnown RBP18.06■□□□□ 0.48
CHRFAM7A-203ENST00000401522 DGKHQ86XP1 1220 aa18.06■□□□□ 0.48
CHRFAM7A-203ENST00000401522 NUP133Q8WUM0 1156 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms