RNA–Protein interactions for RNA: ENST00000400959.7

TRAF3IP3-205, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 5 BASIC

Gene TRAF3IP3, Length 1,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-205ENST00000400959 SMARCA1P28370 1054 aa13.32□□□□□ -0.28
TRAF3IP3-205ENST00000400959 SLC16A2P36021 539 aa13.32□□□□□ -0.28
TRAF3IP3-205ENST00000400959 CEBPZQ03701 1054 aaKnown RBP13.32□□□□□ -0.28
TRAF3IP3-205ENST00000400959 TREML2Q5T2D2 321 aa13.32□□□□□ -0.28
TRAF3IP3-205ENST00000400959 GADL1Q6ZQY3 521 aa13.32□□□□□ -0.28
TRAF3IP3-205ENST00000400959 PROCA1Q8NCQ7 364 aaPredicted RBP13.32□□□□□ -0.28
TRAF3IP3-205ENST00000400959 BICD2Q8TD16 824 aa13.32□□□□□ -0.28
TRAF3IP3-205ENST00000400959 WASF1Q92558 559 aa13.32□□□□□ -0.28
TRAF3IP3-205ENST00000400959 USP28Q96RU2 1077 aa13.32□□□□□ -0.28
TRAF3IP3-205ENST00000400959 SPZ1Q9BXG8 430 aa13.32□□□□□ -0.28
TRAF3IP3-205ENST00000400959 RIOX1Q9H6W3 641 aa13.32□□□□□ -0.28
TRAF3IP3-205ENST00000400959 CREBZFQ9NS37 354 aa13.32□□□□□ -0.28
TRAF3IP3-205ENST00000400959 RCOR1Q9UKL0 485 aa13.32□□□□□ -0.28
TRAF3IP3-205ENST00000400959 PLA2G6O60733 806 aa13.31□□□□□ -0.28
TRAF3IP3-205ENST00000400959 FMNL1O95466 1100 aaPredicted RBP13.31□□□□□ -0.28
TRAF3IP3-205ENST00000400959 LIG1P18858 919 aa13.31□□□□□ -0.28
TRAF3IP3-205ENST00000400959 STAT2P52630 851 aa13.31□□□□□ -0.28
TRAF3IP3-205ENST00000400959 GTF2A2P52657 109 aa13.31□□□□□ -0.28
TRAF3IP3-205ENST00000400959 TRIM29Q14134 588 aa13.31□□□□□ -0.28
TRAF3IP3-205ENST00000400959 PGBD1Q96JS3 809 aa13.31□□□□□ -0.28
TRAF3IP3-205ENST00000400959 SLC26A6Q9BXS9 759 aa13.31□□□□□ -0.28
TRAF3IP3-205ENST00000400959 FBXO28Q9NVF7 368 aa13.31□□□□□ -0.28
TRAF3IP3-205ENST00000400959 KIF23Q02241 960 aaPredicted RBP13.31□□□□□ -0.28
TRAF3IP3-205ENST00000400959 CCDC173Q0VFZ6 552 aa13.31□□□□□ -0.28
TRAF3IP3-205ENST00000400959 GPAT2Q6NUI2 795 aa13.31□□□□□ -0.28
TRAF3IP3-205ENST00000400959 TRIM22Q8IYM9 498 aa13.31□□□□□ -0.28
TRAF3IP3-205ENST00000400959 ADGRF4Q8IZF3 695 aa13.31□□□□□ -0.28
TRAF3IP3-205ENST00000400959 BRI3BPQ8WY22 251 aa13.31□□□□□ -0.28
TRAF3IP3-205ENST00000400959 AIFM3Q96NN9 605 aa13.31□□□□□ -0.28
TRAF3IP3-205ENST00000400959 RNF26Q9BY78 433 aaPredicted RBP13.31□□□□□ -0.28
TRAF3IP3-205ENST00000400959 TANGO6Q9C0B7 1094 aa13.31□□□□□ -0.28
TRAF3IP3-205ENST00000400959 NUP62CLQ9H1M0 184 aa13.31□□□□□ -0.28
TRAF3IP3-205ENST00000400959 FEM1BQ9UK73 627 aa13.31□□□□□ -0.28
TRAF3IP3-205ENST00000400959 CCL15-CCL14A0A0B4J2E2 113 aa13.3□□□□□ -0.28
TRAF3IP3-205ENST00000400959 PRPF3O43395 683 aaKnown RBP13.3□□□□□ -0.28
TRAF3IP3-205ENST00000400959 CETPP11597 493 aa13.3□□□□□ -0.28
TRAF3IP3-205ENST00000400959 CCL15Q16663 113 aa13.3□□□□□ -0.28
TRAF3IP3-205ENST00000400959 SYDE2Q5VT97 1194 aa13.3□□□□□ -0.28
TRAF3IP3-205ENST00000400959 KRT40Q6A162 431 aa13.3□□□□□ -0.28
TRAF3IP3-205ENST00000400959 CATSPERGQ6ZRH7 1159 aa13.3□□□□□ -0.28
TRAF3IP3-205ENST00000400959 FASTKD5Q7L8L6 764 aaKnown RBP13.3□□□□□ -0.28
TRAF3IP3-205ENST00000400959 FAM160B2Q86V87 743 aa13.3□□□□□ -0.28
TRAF3IP3-205ENST00000400959 CHURC1Q8WUH1 139 aa13.3□□□□□ -0.28
TRAF3IP3-205ENST00000400959 MTMR8Q96EF0 704 aa13.3□□□□□ -0.28
TRAF3IP3-205ENST00000400959 FTOQ9C0B1 505 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRAF3IP3-205ENST00000400959 JMJD4Q9H9V9 463 aa13.3□□□□□ -0.28
TRAF3IP3-205ENST00000400959 GJB4Q9NTQ9 266 aa13.3□□□□□ -0.28
TRAF3IP3-205ENST00000400959 DDX19AQ9NUU7 478 aaKnown RBP13.3□□□□□ -0.28
TRAF3IP3-205ENST00000400959 RTEL1Q9NZ71 1219 aa13.3□□□□□ -0.28
TRAF3IP3-205ENST00000400959 PRR12Q9ULL5 1215 aa13.3□□□□□ -0.28
TRAF3IP3-205ENST00000400959 AGTPBP1Q9UPW5 1226 aa13.3□□□□□ -0.28
TRAF3IP3-205ENST00000400959 hCG_1642624A0A1W2PR95 340 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 RASSF10A6NK89 507 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 USP17L15C9J2P7 530 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 USP17L13C9JLJ4 530 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 USP17L11C9JVI0 530 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 USP17L18D6R9N7 530 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 USP17L22D6RA61 530 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 USP17L17D6RBQ6 530 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 USP17L19D6RCP7 530 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 USP17L20D6RJB6 530 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 HOXA7P31268 230 aaPredicted RBP13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 USP17L24Q0WX57 530 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 IKQ13123 557 aaPredicted RBP13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 GNL2Q13823 731 aaKnown RBP13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 PKN1Q16512 942 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 CCDC102AQ96A19 550 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 SLF1Q9BQI6 1058 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 VAT1LQ9HCJ6 419 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 DACT1Q9NYF0 836 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 V9GY48 417 aaPredicted RBP13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 TESPA1A2RU30 521 aaPredicted RBP13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 KIF28PB7ZC32 967 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 FLOT1O75955 427 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 MYSM1Q5VVJ2 828 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 CYP4F22Q6NT55 531 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 RNF214Q8ND24 703 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 PIBF1Q8WXW3 757 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 KIFC2Q96AC6 838 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 PIGSQ96S52 555 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 PPP1R9AQ9ULJ8 1098 aa13.29□□□□□ -0.28
TRAF3IP3-205ENST00000400959 COL11A1P12107 1806 aaPredicted RBP13.28□□□□□ -0.28
TRAF3IP3-205ENST00000400959 BTBD19C9JJ37 291 aa13.28□□□□□ -0.28
TRAF3IP3-205ENST00000400959 DEXIO95424 95 aa13.28□□□□□ -0.28
TRAF3IP3-205ENST00000400959 YEATS4O95619 227 aa13.28□□□□□ -0.28
TRAF3IP3-205ENST00000400959 STK38Q15208 465 aa13.28□□□□□ -0.28
TRAF3IP3-205ENST00000400959 DEFB115Q30KQ5 88 aa13.28□□□□□ -0.28
TRAF3IP3-205ENST00000400959 HOMER1Q86YM7 354 aa13.28□□□□□ -0.28
TRAF3IP3-205ENST00000400959 PRPF38AQ8NAV1 312 aaKnown RBP13.28□□□□□ -0.28
TRAF3IP3-205ENST00000400959 PPP1R9BQ96SB3 815 aa13.28□□□□□ -0.28
TRAF3IP3-205ENST00000400959 PTPN18Q99952 460 aa13.28□□□□□ -0.28
TRAF3IP3-205ENST00000400959 TNMDQ9H2S6 317 aa13.28□□□□□ -0.28
TRAF3IP3-205ENST00000400959 POLR3EQ9NVU0 708 aa13.28□□□□□ -0.28
TRAF3IP3-205ENST00000400959 A0A0G2JMZ2 1700 aa13.28□□□□□ -0.28
TRAF3IP3-205ENST00000400959 SMCHD1A6NHR9 2005 aa13.28□□□□□ -0.28
TRAF3IP3-205ENST00000400959 MANSC4A6NHS7 340 aaPredicted RBP13.27□□□□□ -0.28
TRAF3IP3-205ENST00000400959 DSG3P32926 999 aa13.27□□□□□ -0.28
TRAF3IP3-205ENST00000400959 ME1P48163 572 aa13.27□□□□□ -0.28
TRAF3IP3-205ENST00000400959 SNAP25P60880 206 aa13.27□□□□□ -0.28
TRAF3IP3-205ENST00000400959 COG2Q14746 738 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms