RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 NPM3O75607 178 aaKnown RBP17.8■□□□□ 0.44
CDC42-203ENST00000400259 MYL1P05976 194 aa17.8■□□□□ 0.44
CDC42-203ENST00000400259 CDK11BP21127 795 aaKnown RBP17.8■□□□□ 0.44
CDC42-203ENST00000400259 STAT6P42226 847 aa17.8■□□□□ 0.44
CDC42-203ENST00000400259 ZNF543Q08ER8 600 aa17.8■□□□□ 0.44
CDC42-203ENST00000400259 DACT2Q5SW24 774 aa17.8■□□□□ 0.44
CDC42-203ENST00000400259 E4F1Q66K89 784 aaPredicted RBP17.8■□□□□ 0.44
CDC42-203ENST00000400259 NEK8Q86SG6 692 aa17.8■□□□□ 0.44
CDC42-203ENST00000400259 LRRC47Q8N1G4 583 aaKnown RBP17.8■□□□□ 0.44
CDC42-203ENST00000400259 ZNF710Q8N1W2 664 aa17.8■□□□□ 0.44
CDC42-203ENST00000400259 CCDC17Q96LX7 622 aa17.8■□□□□ 0.44
CDC42-203ENST00000400259 DBNDD1Q9H9R9 158 aa17.8■□□□□ 0.44
CDC42-203ENST00000400259 RIOK3O14730 519 aaKnown RBP17.79■□□□□ 0.44
CDC42-203ENST00000400259 NAALADL2Q58DX5 795 aa17.79■□□□□ 0.44
CDC42-203ENST00000400259 PPP1R18Q6NYC8 613 aa17.79■□□□□ 0.44
CDC42-203ENST00000400259 APTXQ7Z2E3 356 aaKnown RBP17.79■□□□□ 0.44
CDC42-203ENST00000400259 REXO1Q8N1G1 1221 aaKnown RBP17.79■□□□□ 0.44
CDC42-203ENST00000400259 UBA5Q9GZZ9 404 aa17.79■□□□□ 0.44
CDC42-203ENST00000400259 KIF2AO00139 706 aaPredicted RBP17.79■□□□□ 0.44
CDC42-203ENST00000400259 OR52Z1P0C646 297 aa17.79■□□□□ 0.44
CDC42-203ENST00000400259 NR1I3Q14994 352 aa17.79■□□□□ 0.44
CDC42-203ENST00000400259 KARSQ15046 597 aaKnown RBP17.79■□□□□ 0.44
CDC42-203ENST00000400259 PTPN14Q15678 1187 aa17.79■□□□□ 0.44
CDC42-203ENST00000400259 ZNF658Q5TYW1 1059 aaPredicted RBP17.79■□□□□ 0.44
CDC42-203ENST00000400259 IDI2Q9BXS1 227 aa17.79■□□□□ 0.44
CDC42-203ENST00000400259 PDCL3Q9H2J4 239 aa17.79■□□□□ 0.44
CDC42-203ENST00000400259 DHX36Q9H2U1 1008 aaKnown RBP17.79■□□□□ 0.44
CDC42-203ENST00000400259 CUEDC2Q9H467 287 aa17.79■□□□□ 0.44
CDC42-203ENST00000400259 MAGEF1Q9HAY2 307 aa17.79■□□□□ 0.44
CDC42-203ENST00000400259 FRMPD2Q68DX3 1309 aaPredicted RBP17.79■□□□□ 0.44
CDC42-203ENST00000400259 NFIAQ12857 509 aa17.78■□□□□ 0.44
CDC42-203ENST00000400259 CEP135Q66GS9 1140 aa17.78■□□□□ 0.44
CDC42-203ENST00000400259 SPECC1LQ69YQ0 1117 aa17.78■□□□□ 0.44
CDC42-203ENST00000400259 STAMQ92783 540 aa17.78■□□□□ 0.44
CDC42-203ENST00000400259 BLZF1Q9H2G9 400 aa17.78■□□□□ 0.44
CDC42-203ENST00000400259 VAT1LQ9HCJ6 419 aa17.78■□□□□ 0.44
CDC42-203ENST00000400259 ECE2O60344 883 aa17.78■□□□□ 0.44
CDC42-203ENST00000400259 RPN1P04843 607 aaKnown RBP17.78■□□□□ 0.44
CDC42-203ENST00000400259 UBA7P41226 1012 aa17.78■□□□□ 0.44
CDC42-203ENST00000400259 GPATCH4Q5T3I0 446 aaKnown RBP17.78■□□□□ 0.44
CDC42-203ENST00000400259 RRAGBQ5VZM2 374 aa17.78■□□□□ 0.44
CDC42-203ENST00000400259 CNKSR1Q969H4 720 aa17.78■□□□□ 0.44
CDC42-203ENST00000400259 ARID3AQ99856 593 aa17.78■□□□□ 0.44
CDC42-203ENST00000400259 KCNQ5Q9NR82 932 aa17.78■□□□□ 0.44
CDC42-203ENST00000400259 RWDD2AQ9UIY3 292 aa17.78■□□□□ 0.44
CDC42-203ENST00000400259 MYH7BA7E2Y1 1941 aa17.78■□□□□ 0.44
CDC42-203ENST00000400259 CDC25AP30304 524 aa17.77■□□□□ 0.44
CDC42-203ENST00000400259 KCNB1Q14721 858 aa17.77■□□□□ 0.44
CDC42-203ENST00000400259 C7orf43Q8WVR3 580 aa17.77■□□□□ 0.44
CDC42-203ENST00000400259 KBTBD4Q9NVX7 518 aa17.77■□□□□ 0.44
CDC42-203ENST00000400259 PNMA6FA0A0J9YX94 578 aa17.77■□□□□ 0.43
CDC42-203ENST00000400259 CTIFO43310 598 aaKnown RBP17.77■□□□□ 0.43
CDC42-203ENST00000400259 CCNT1O60563 726 aaKnown RBP17.77■□□□□ 0.43
CDC42-203ENST00000400259 RXRBP28702 533 aa17.77■□□□□ 0.43
CDC42-203ENST00000400259 LETM2Q2VYF4 491 aa17.77■□□□□ 0.43
CDC42-203ENST00000400259 HSP90AA4PQ58FG1 418 aa17.77■□□□□ 0.43
CDC42-203ENST00000400259 KLHL10Q6JEL2 608 aa17.77■□□□□ 0.43
CDC42-203ENST00000400259 FCHSD1Q86WN1 690 aa17.77■□□□□ 0.43
CDC42-203ENST00000400259 CLEC10AQ8IUN9 316 aa17.77■□□□□ 0.43
CDC42-203ENST00000400259 SMYD4Q8IYR2 804 aaPredicted RBP17.77■□□□□ 0.43
CDC42-203ENST00000400259 TBCKQ8TEA7 893 aa17.77■□□□□ 0.43
CDC42-203ENST00000400259 MTMR8Q96EF0 704 aa17.77■□□□□ 0.43
CDC42-203ENST00000400259 CTAGE1Q96RT6 745 aa17.77■□□□□ 0.43
CDC42-203ENST00000400259 DNAJC18Q9H819 358 aa17.77■□□□□ 0.43
CDC42-203ENST00000400259 JMJD4Q9H9V9 463 aa17.77■□□□□ 0.43
CDC42-203ENST00000400259 PP2D1A8MPX8 630 aa17.76■□□□□ 0.43
CDC42-203ENST00000400259 CCP110O43303 1012 aa17.76■□□□□ 0.43
CDC42-203ENST00000400259 ADCY7P51828 1080 aa17.76■□□□□ 0.43
CDC42-203ENST00000400259 EIF6P56537 245 aaKnown RBP17.76■□□□□ 0.43
CDC42-203ENST00000400259 AEBP2Q6ZN18 517 aaPredicted RBP17.76■□□□□ 0.43
CDC42-203ENST00000400259 TMEM139Q8IV31 216 aa17.76■□□□□ 0.43
CDC42-203ENST00000400259 PPP1R13BQ96KQ4 1090 aa17.76■□□□□ 0.43
CDC42-203ENST00000400259 SERPINA10Q9UK55 444 aa17.76■□□□□ 0.43
CDC42-203ENST00000400259 COL2A1P02458 1487 aaPredicted RBP17.76■□□□□ 0.43
CDC42-203ENST00000400259 TUBB4AP04350 444 aa17.75■□□□□ 0.43
CDC42-203ENST00000400259 KIAA0825Q8IV33 1275 aa17.75■□□□□ 0.43
CDC42-203ENST00000400259 ZFPM1Q8IX07 1006 aa17.75■□□□□ 0.43
CDC42-203ENST00000400259 TRMT1Q9NXH9 659 aaKnown RBP17.75■□□□□ 0.43
CDC42-203ENST00000400259 ADD3Q9UEY8 706 aaKnown RBP17.75■□□□□ 0.43
CDC42-203ENST00000400259 CTNND2Q9UQB3 1225 aa17.75■□□□□ 0.43
CDC42-203ENST00000400259 PBX1P40424 430 aa17.75■□□□□ 0.43
CDC42-203ENST00000400259 STX17P56962 302 aa17.75■□□□□ 0.43
CDC42-203ENST00000400259 CC2D2BQ6DHV5 1058 aa17.75■□□□□ 0.43
CDC42-203ENST00000400259 ADGRF4Q8IZF3 695 aa17.75■□□□□ 0.43
CDC42-203ENST00000400259 MKL1Q969V6 931 aa17.75■□□□□ 0.43
CDC42-203ENST00000400259 GPCPD1Q9NPB8 672 aa17.75■□□□□ 0.43
CDC42-203ENST00000400259 RIC8AQ9NPQ8 531 aa17.75■□□□□ 0.43
CDC42-203ENST00000400259 PI4KBQ9UBF8 816 aa17.75■□□□□ 0.43
CDC42-203ENST00000400259 BIN2Q9UBW5 565 aaPredicted RBP17.75■□□□□ 0.43
CDC42-203ENST00000400259 FAM198AQ9UFP1 575 aa17.75■□□□□ 0.43
CDC42-203ENST00000400259 PAK1Q13153 545 aa17.74■□□□□ 0.43
CDC42-203ENST00000400259 JAKMIP3Q5VZ66 844 aa17.74■□□□□ 0.43
CDC42-203ENST00000400259 CABP7Q86V35 215 aa17.74■□□□□ 0.43
CDC42-203ENST00000400259 IGSF22Q8N9C0 903 aa17.74■□□□□ 0.43
CDC42-203ENST00000400259 MTMR9Q96QG7 549 aa17.74■□□□□ 0.43
CDC42-203ENST00000400259 LRRC10BA6NIK2 292 aa17.74■□□□□ 0.43
CDC42-203ENST00000400259 KLRC4O43908 158 aa17.74■□□□□ 0.43
CDC42-203ENST00000400259 PTPN21Q16825 1174 aa17.74■□□□□ 0.43
CDC42-203ENST00000400259 TC2NQ8N9U0 490 aa17.74■□□□□ 0.43
CDC42-203ENST00000400259 COA7Q96BR5 231 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms