RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 GALNT17Q6IS24 598 aa8.75□□□□□ -1.01
USP16-204ENST00000399976 MCF2L2Q86YR7 1114 aa8.75□□□□□ -1.01
USP16-204ENST00000399976 HPS5Q9UPZ3 1129 aa8.75□□□□□ -1.01
USP16-204ENST00000399976 TMEM232C9JQI7 657 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 PRPF3O43395 683 aaKnown RBP8.74□□□□□ -1.01
USP16-204ENST00000399976 PTPREP23469 700 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 TMEM132BQ14DG7 1078 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 MAMDC4Q6UXC1 1216 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 PLEKHH3Q7Z736 793 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 CCDC84Q86UT8 332 aaPredicted RBP8.74□□□□□ -1.01
USP16-204ENST00000399976 CLEC10AQ8IUN9 316 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 SNX21Q969T3 373 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 BTBD7Q9P203 1132 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 SYNGAP1Q96PV0 1343 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 KLRF2D3W0D1 207 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 ST18O60284 1047 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 TRPA1O75762 1119 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 SEC24BO95487 1268 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 STAT3P40763 770 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 NKX3-2P78367 333 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 RTN1Q16799 776 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 CCDC96Q2M329 555 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 XRRA1Q6P2D8 792 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 FBXO46Q6PJ61 603 aaPredicted RBP8.74□□□□□ -1.01
USP16-204ENST00000399976 SLAIN1Q8ND83 568 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 DNERQ8NFT8 737 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 ZNF296Q8WUU4 475 aaPredicted RBP8.74□□□□□ -1.01
USP16-204ENST00000399976 COA7Q96BR5 231 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 ATG4CQ96DT6 458 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 ACAD9Q9H845 621 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 JMJD4Q9H9V9 463 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 SRRDQ9UH36 339 aa8.74□□□□□ -1.01
USP16-204ENST00000399976 MRPL11Q9Y3B7 192 aaKnown RBP8.74□□□□□ -1.01
USP16-204ENST00000399976 PDIA3P30101 505 aaKnown RBP8.73□□□□□ -1.01
USP16-204ENST00000399976 HSD17B4P51659 736 aa8.73□□□□□ -1.01
USP16-204ENST00000399976 NTRK3Q16288 839 aa8.73□□□□□ -1.01
USP16-204ENST00000399976 CPLX2Q6PUV4 134 aaKnown RBP8.73□□□□□ -1.01
USP16-204ENST00000399976 ARMC5Q96C12 935 aa8.73□□□□□ -1.01
USP16-204ENST00000399976 APBA2Q99767 749 aa8.73□□□□□ -1.01
USP16-204ENST00000399976 AMNQ9BXJ7 453 aa8.73□□□□□ -1.01
USP16-204ENST00000399976 MOV10L1Q9BXT6 1211 aaKnown RBP8.73□□□□□ -1.01
USP16-204ENST00000399976 FAM217BQ9NTX9 383 aaPredicted RBP8.73□□□□□ -1.01
USP16-204ENST00000399976 GJD2Q9UKL4 321 aa8.73□□□□□ -1.01
USP16-204ENST00000399976 B4DLN1 442 aa8.73□□□□□ -1.01
USP16-204ENST00000399976 STAM2O75886 525 aa8.73□□□□□ -1.01
USP16-204ENST00000399976 RGS2P41220 211 aa8.73□□□□□ -1.01
USP16-204ENST00000399976 MRPL12P52815 198 aaKnown RBP8.73□□□□□ -1.01
USP16-204ENST00000399976 NBPF11Q86T75 865 aa8.73□□□□□ -1.01
USP16-204ENST00000399976 ADGRF4Q8IZF3 695 aa8.73□□□□□ -1.01
USP16-204ENST00000399976 DAGLBQ8NCG7 672 aa8.73□□□□□ -1.01
USP16-204ENST00000399976 CCDC12Q8WUD4 166 aaPredicted RBP8.73□□□□□ -1.01
USP16-204ENST00000399976 RRP36Q96EU6 259 aaKnown RBP8.73□□□□□ -1.01
USP16-204ENST00000399976 TSHZ2Q9NRE2 1034 aa8.73□□□□□ -1.01
USP16-204ENST00000399976 BRPF3Q9ULD4 1205 aa8.73□□□□□ -1.01
USP16-204ENST00000399976 LIMCH1Q9UPQ0 1083 aa8.73□□□□□ -1.01
USP16-204ENST00000399976 KLF18A0A0U1RQI7 1052 aa8.73□□□□□ -1.01
USP16-204ENST00000399976 CYP2C8P10632 490 aa8.73□□□□□ -1.01
USP16-204ENST00000399976 METAP2P50579 478 aaKnown RBP eCLIP8.73□□□□□ -1.01
USP16-204ENST00000399976 NFXL1Q6ZNB6 911 aa8.73□□□□□ -1.01
USP16-204ENST00000399976 GPR142Q7Z601 462 aa8.73□□□□□ -1.01
USP16-204ENST00000399976 WASF1Q92558 559 aa8.73□□□□□ -1.01
USP16-204ENST00000399976 ZKSCAN3Q9BRR0 538 aa8.73□□□□□ -1.01
USP16-204ENST00000399976 TXNRD2Q9NNW7 524 aa8.73□□□□□ -1.01
USP16-204ENST00000399976 FMNL1O95466 1100 aaPredicted RBP8.72□□□□□ -1.01
USP16-204ENST00000399976 ATP2B2Q01814 1243 aa8.72□□□□□ -1.01
USP16-204ENST00000399976 MAP2K5Q13163 448 aa8.72□□□□□ -1.01
USP16-204ENST00000399976 CDC37Q16543 378 aaPredicted RBP8.72□□□□□ -1.01
USP16-204ENST00000399976 GTF3C6Q969F1 213 aa8.72□□□□□ -1.01
USP16-204ENST00000399976 MPHOSPH6Q99547 160 aaKnown RBP8.72□□□□□ -1.01
USP16-204ENST00000399976 PTPN22Q9Y2R2 807 aa8.72□□□□□ -1.01
USP16-204ENST00000399976 GOLGA8AA7E2F4 631 aa8.72□□□□□ -1.01
USP16-204ENST00000399976 GOLGA8BA8MQT2 603 aa8.72□□□□□ -1.01
USP16-204ENST00000399976 TBC1D8O95759 1140 aa8.72□□□□□ -1.01
USP16-204ENST00000399976 PFKFB3Q16875 520 aaPredicted RBP8.72□□□□□ -1.01
USP16-204ENST00000399976 ZNF792Q3KQV3 632 aa8.72□□□□□ -1.01
USP16-204ENST00000399976 OTOP1Q7RTM1 612 aa8.72□□□□□ -1.01
USP16-204ENST00000399976 FBXO11Q86XK2 927 aa8.72□□□□□ -1.01
USP16-204ENST00000399976 BRF1Q92994 677 aa8.72□□□□□ -1.01
USP16-204ENST00000399976 NUDT12Q9BQG2 462 aa8.72□□□□□ -1.01
USP16-204ENST00000399976 RPTORQ8N122 1335 aa8.71□□□□□ -1.01
USP16-204ENST00000399976 FCER1AP12319 257 aa8.71□□□□□ -1.01
USP16-204ENST00000399976 MKRN3Q13064 507 aaKnown RBP8.71□□□□□ -1.01
USP16-204ENST00000399976 MAP3K21Q5TCX8 1036 aa8.71□□□□□ -1.01
USP16-204ENST00000399976 KCTD1Q719H9 257 aa8.71□□□□□ -1.01
USP16-204ENST00000399976 ANKRD13CQ8N6S4 541 aa8.71□□□□□ -1.01
USP16-204ENST00000399976 FAM133AQ8N9E0 248 aa8.71□□□□□ -1.01
USP16-204ENST00000399976 SMARCC2Q8TAQ2 1214 aa8.71□□□□□ -1.01
USP16-204ENST00000399976 CLEC4DQ8WXI8 215 aa8.71□□□□□ -1.01
USP16-204ENST00000399976 TRIM47Q96LD4 638 aa8.71□□□□□ -1.01
USP16-204ENST00000399976 IWS1Q96ST2 819 aa8.71□□□□□ -1.01
USP16-204ENST00000399976 CTDP1Q9Y5B0 961 aaPredicted RBP8.71□□□□□ -1.01
USP16-204ENST00000399976 LOXHD1Q8IVV2 1947 aa8.71□□□□□ -1.01
USP16-204ENST00000399976 CYTH3O43739 400 aa8.71□□□□□ -1.02
USP16-204ENST00000399976 DEXIO95424 95 aa8.71□□□□□ -1.02
USP16-204ENST00000399976 EDNRBP24530 442 aa8.71□□□□□ -1.02
USP16-204ENST00000399976 AK2P54819 239 aa8.71□□□□□ -1.02
USP16-204ENST00000399976 HMGN5P82970 282 aaKnown RBP8.71□□□□□ -1.02
USP16-204ENST00000399976 ZYXQ15942 572 aaKnown RBP8.71□□□□□ -1.02
USP16-204ENST00000399976 QRICH1Q2TAL8 776 aa8.71□□□□□ -1.02
USP16-204ENST00000399976 SNRNP48Q6IEG0 339 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms