RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 LRCH2Q5VUJ6 765 aa13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 TTC30BQ8N4P2 665 aa13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 SPDYE1Q8NFV5 336 aaPredicted RBP13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 PCDHB15Q9Y5E8 787 aa13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 PLEKHM2Q8IWE5 1019 aa13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 CCDC105Q8IYK2 499 aa13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 URGCPQ8TCY9 931 aa13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 SLC4A1P02730 911 aa13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 RNF219Q5W0B1 726 aaPredicted RBP13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 AMNQ9BXJ7 453 aa13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 TPCN1Q9ULQ1 816 aa13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 XRCC5P13010 732 aaKnown RBP13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 MAPK8IP2Q13387 824 aaPredicted RBP13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 PSMD6Q15008 389 aa13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 KLHL40Q2TBA0 621 aa13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 TBC1D10BQ4KMP7 808 aaPredicted RBP13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 GPIHBP1Q8IV16 184 aa13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 SLC17A8Q8NDX2 589 aa13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 CDHR1Q96JP9 859 aa13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 FAM8A1Q9UBU6 413 aa13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 FOSP01100 380 aaPredicted RBP13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 DSTYKQ6XUX3 929 aa13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 ANGPTL3Q9Y5C1 460 aa13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 PDE6AP16499 860 aa13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 FAM160A1Q05DH4 1040 aa13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 GKAP1Q5VSY0 366 aaPredicted RBP13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 RIPOR2Q9Y4F9 1068 aa13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 NEK8Q86SG6 692 aa13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 TTC1Q99614 292 aa13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 TRIM31Q9BZY9 425 aa13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 VPS37BQ9H9H4 285 aa13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 PPME1Q9Y570 386 aa13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 IQCA1LA6NCM1 817 aa13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 WDR64B1ANS9 1081 aa13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 GSTA1P08263 222 aa13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 GSTA2P09210 222 aa13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 IL6STP40189 918 aaPredicted RBP13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 CEP85LQ5SZL2 805 aa13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 HHATQ5VTY9 493 aa13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 SRRTQ9BXP5 876 aaKnown RBP13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 ATP10DQ9P241 1426 aa13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 KDM2BQ8NHM5 1336 aa13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 SRGAP2BP0DMP2 458 aa13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 RBSNQ9H1K0 784 aa13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 SPON1Q9HCB6 807 aa13.25□□□□□ -0.29
CACNA1C-213ENST00000399629 DENND3A2RUS2 1198 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 PSDA5PKW4 1024 aaPredicted RBP13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 LMNB1P20700 586 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 MARK3P27448 753 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 TUBB4BP68371 445 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 ASPRV1Q53RT3 343 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 YAF2Q8IY57 180 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 CMTR1Q8N1G2 835 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 N4BP2L2Q92802 583 aaPredicted RBP13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 GPKOWQ92917 476 aaPredicted RBP eCLIP13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 STMN2Q93045 179 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 GREM2Q9H772 168 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 RABGAP1Q9Y3P9 1069 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 PCDHB4Q9Y5E5 795 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 AOX1Q06278 1338 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 GIGYF1O75420 1035 aaPredicted RBP13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 DDAH1O94760 285 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 KRT40Q6A162 431 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 MYOCDQ8IZQ8 938 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 U2AF1L4Q8WU68 220 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 DSCC1Q9BVC3 393 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 E7EWF7 191 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 BNIP3LO60238 219 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 RBM6P78332 1123 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 DNAJC21Q5F1R6 531 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 RNF139Q8WU17 664 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 KRT12Q99456 494 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 KMT5AQ9NQR1 393 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 TAB2Q9NYJ8 693 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 CEP104O60308 925 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 SECISBP2LQ93073 1101 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 SLC38A10Q9HBR0 1119 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 COL4A3BPQ9Y5P4 624 aa13.24□□□□□ -0.29
CACNA1C-213ENST00000399629 TUBB4AP04350 444 aa13.23□□□□□ -0.29
CACNA1C-213ENST00000399629 SYDE2Q5VT97 1194 aa13.23□□□□□ -0.29
CACNA1C-213ENST00000399629 THEM5Q8N1Q8 247 aa13.23□□□□□ -0.29
CACNA1C-213ENST00000399629 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.23□□□□□ -0.29
CACNA1C-213ENST00000399629 CCDC127Q96BQ5 260 aa13.23□□□□□ -0.29
CACNA1C-213ENST00000399629 ZFP91Q96JP5 570 aaPredicted RBP13.23□□□□□ -0.29
CACNA1C-213ENST00000399629 DHX36Q9H2U1 1008 aaKnown RBP13.23□□□□□ -0.29
CACNA1C-213ENST00000399629 SAT1P21673 171 aa13.23□□□□□ -0.29
CACNA1C-213ENST00000399629 POSTNQ15063 836 aa13.23□□□□□ -0.29
CACNA1C-213ENST00000399629 GALNT17Q6IS24 598 aa13.23□□□□□ -0.29
CACNA1C-213ENST00000399629 LARSQ9P2J5 1176 aaKnown RBP13.23□□□□□ -0.29
CACNA1C-213ENST00000399629 PSAPP07602 524 aa13.23□□□□□ -0.29
CACNA1C-213ENST00000399629 BMP3P12645 472 aa13.23□□□□□ -0.29
CACNA1C-213ENST00000399629 PPP4R1Q8TF05 950 aa13.23□□□□□ -0.29
CACNA1C-213ENST00000399629 USP17L8P0C7I0 530 aa13.23□□□□□ -0.29
CACNA1C-213ENST00000399629 NFKBIAP25963 317 aa13.23□□□□□ -0.29
CACNA1C-213ENST00000399629 LTKP29376 864 aa13.23□□□□□ -0.29
CACNA1C-213ENST00000399629 C8orf74Q6P047 294 aa13.23□□□□□ -0.29
CACNA1C-213ENST00000399629 PEX26Q7Z412 305 aa13.23□□□□□ -0.29
CACNA1C-213ENST00000399629 APOBEC3FQ8IUX4 373 aaKnown RBP13.23□□□□□ -0.29
CACNA1C-213ENST00000399629 GDAP1Q8TB36 358 aa13.23□□□□□ -0.29
CACNA1C-213ENST00000399629 F8W8V4 182 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms