RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 IFNL3Q8IZI9 196 aa14.05□□□□□ -0.16
SMIM11A-201ENST00000399292 CRIPAKQ8N1N5 446 aa14.05□□□□□ -0.16
SMIM11A-201ENST00000399292 RPAP3Q9H6T3 665 aaPredicted RBP14.05□□□□□ -0.16
SMIM11A-201ENST00000399292 SH2D4AQ9H788 454 aa14.05□□□□□ -0.16
SMIM11A-201ENST00000399292 KANSL2Q9H9L4 492 aa14.05□□□□□ -0.16
SMIM11A-201ENST00000399292 ZNF287Q9HBT7 754 aa14.05□□□□□ -0.16
SMIM11A-201ENST00000399292 TXNRD2Q9NNW7 524 aa14.05□□□□□ -0.16
SMIM11A-201ENST00000399292 TMX2Q9Y320 296 aa14.05□□□□□ -0.16
SMIM11A-201ENST00000399292 RABGAP1Q9Y3P9 1069 aa14.05□□□□□ -0.16
SMIM11A-201ENST00000399292 PTPRFP10586 1907 aa14.05□□□□□ -0.16
SMIM11A-201ENST00000399292 ERVK-9P63128 1117 aa14.04□□□□□ -0.16
SMIM11A-201ENST00000399292 ERVK-24P63145 666 aa14.04□□□□□ -0.16
SMIM11A-201ENST00000399292 MTFR1Q15390 333 aa14.04□□□□□ -0.16
SMIM11A-201ENST00000399292 TICAM2Q86XR7 235 aa14.04□□□□□ -0.16
SMIM11A-201ENST00000399292 STK11IPQ8N1F8 1099 aa14.04□□□□□ -0.16
SMIM11A-201ENST00000399292 KRI1Q8N9T8 703 aaKnown RBP14.04□□□□□ -0.16
SMIM11A-201ENST00000399292 PAGR1Q9BTK6 254 aa14.04□□□□□ -0.16
SMIM11A-201ENST00000399292 HOXC10Q9NYD6 342 aa14.04□□□□□ -0.16
SMIM11A-201ENST00000399292 LOC285556D6RIA3 1793 aa14.04□□□□□ -0.16
SMIM11A-201ENST00000399292 NAV1Q8NEY1 1877 aa14.04□□□□□ -0.16
SMIM11A-201ENST00000399292 WNT7AO00755 349 aa14.03□□□□□ -0.16
SMIM11A-201ENST00000399292 PEX10O60683 326 aa14.03□□□□□ -0.16
SMIM11A-201ENST00000399292 MAPK4P31152 587 aa14.03□□□□□ -0.16
SMIM11A-201ENST00000399292 ATP2B2Q01814 1243 aa14.03□□□□□ -0.16
SMIM11A-201ENST00000399292 COG2Q14746 738 aa14.03□□□□□ -0.16
SMIM11A-201ENST00000399292 ZNF444Q8N0Y2 327 aaPredicted RBP14.03□□□□□ -0.16
SMIM11A-201ENST00000399292 LPAR1Q92633 364 aa14.03□□□□□ -0.16
SMIM11A-201ENST00000399292 NAPBQ9H115 298 aa14.03□□□□□ -0.16
SMIM11A-201ENST00000399292 EPB41L4AQ9HCS5 686 aaPredicted RBP14.03□□□□□ -0.16
SMIM11A-201ENST00000399292 GJD2Q9UKL4 321 aa14.03□□□□□ -0.16
SMIM11A-201ENST00000399292 DDX60LQ5H9U9 1706 aaKnown RBP14.03□□□□□ -0.16
SMIM11A-201ENST00000399292 ZSWIM8A7E2V4 1837 aa14.02□□□□□ -0.16
SMIM11A-201ENST00000399292 SLC3A2P08195 630 aaKnown RBP14.02□□□□□ -0.17
SMIM11A-201ENST00000399292 CCL5P13501 91 aa14.02□□□□□ -0.17
SMIM11A-201ENST00000399292 EEF2P13639 858 aaKnown RBP14.02□□□□□ -0.17
SMIM11A-201ENST00000399292 ELNP15502 786 aa14.02□□□□□ -0.17
SMIM11A-201ENST00000399292 RASA1P20936 1047 aa14.02□□□□□ -0.17
SMIM11A-201ENST00000399292 CCNA1P78396 465 aa14.02□□□□□ -0.17
SMIM11A-201ENST00000399292 GUCA2AQ02747 115 aa14.02□□□□□ -0.17
SMIM11A-201ENST00000399292 LBX2Q6XYB7 198 aa14.02□□□□□ -0.17
SMIM11A-201ENST00000399292 CLEC10AQ8IUN9 316 aa14.02□□□□□ -0.17
SMIM11A-201ENST00000399292 RILPL2Q969X0 211 aa14.02□□□□□ -0.17
SMIM11A-201ENST00000399292 NUDT12Q9BQG2 462 aa14.02□□□□□ -0.17
SMIM11A-201ENST00000399292 RNF208Q9H0X6 261 aa14.02□□□□□ -0.17
SMIM11A-201ENST00000399292 VCPKMTQ9H867 229 aa14.02□□□□□ -0.17
SMIM11A-201ENST00000399292 CWC22Q9HCG8 908 aaKnown RBP14.02□□□□□ -0.17
SMIM11A-201ENST00000399292 HELLSQ9NRZ9 838 aa14.02□□□□□ -0.17
SMIM11A-201ENST00000399292 PDE4BQ07343 736 aa14.01□□□□□ -0.17
SMIM11A-201ENST00000399292 KIAA1755Q5JYT7 1200 aa14.01□□□□□ -0.17
SMIM11A-201ENST00000399292 CCDC129Q6ZRS4 1044 aa14.01□□□□□ -0.17
SMIM11A-201ENST00000399292 PLEKHH3Q7Z736 793 aa14.01□□□□□ -0.17
SMIM11A-201ENST00000399292 SPICE1Q8N0Z3 855 aa14.01□□□□□ -0.17
SMIM11A-201ENST00000399292 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.01□□□□□ -0.17
SMIM11A-201ENST00000399292 TANGO6Q9C0B7 1094 aa14.01□□□□□ -0.17
SMIM11A-201ENST00000399292 PORCNQ9H237 461 aa14.01□□□□□ -0.17
SMIM11A-201ENST00000399292 OSBPL3Q9H4L5 887 aa14.01□□□□□ -0.17
SMIM11A-201ENST00000399292 TTC24A2A3L6 582 aaPredicted RBP14□□□□□ -0.17
SMIM11A-201ENST00000399292 WDR46O15213 610 aaKnown RBP14□□□□□ -0.17
SMIM11A-201ENST00000399292 RAD21O60216 631 aa14□□□□□ -0.17
SMIM11A-201ENST00000399292 CNMDO75829 334 aa14□□□□□ -0.17
SMIM11A-201ENST00000399292 INHAP05111 366 aa14□□□□□ -0.17
SMIM11A-201ENST00000399292 GJB1P08034 283 aa14□□□□□ -0.17
SMIM11A-201ENST00000399292 IRX6P78412 446 aaPredicted RBP14□□□□□ -0.17
SMIM11A-201ENST00000399292 MCMDC2Q4G0Z9 681 aa14□□□□□ -0.17
SMIM11A-201ENST00000399292 GPR142Q7Z601 462 aa14□□□□□ -0.17
SMIM11A-201ENST00000399292 PLEKHM2Q8IWE5 1019 aa14□□□□□ -0.17
SMIM11A-201ENST00000399292 SOCS4Q8WXH5 440 aa14□□□□□ -0.17
SMIM11A-201ENST00000399292 REPIN1Q9BWE0 567 aaKnown RBP14□□□□□ -0.17
SMIM11A-201ENST00000399292 GOPCQ9HD26 462 aa14□□□□□ -0.17
SMIM11A-201ENST00000399292 BTBD7Q9P203 1132 aa14□□□□□ -0.17
SMIM11A-201ENST00000399292 MYH7P12883 1935 aa14□□□□□ -0.17
SMIM11A-201ENST00000399292 ROBO3Q96MS0 1386 aa13.99□□□□□ -0.17
SMIM11A-201ENST00000399292 PRDM1O75626 825 aa13.99□□□□□ -0.17
SMIM11A-201ENST00000399292 FLOT1O75955 427 aa13.99□□□□□ -0.17
SMIM11A-201ENST00000399292 XRCC5P13010 732 aaKnown RBP13.99□□□□□ -0.17
SMIM11A-201ENST00000399292 CYP2B6P20813 491 aa13.99□□□□□ -0.17
SMIM11A-201ENST00000399292 GJA8P48165 433 aa13.99□□□□□ -0.17
SMIM11A-201ENST00000399292 PPARAQ07869 468 aa13.99□□□□□ -0.17
SMIM11A-201ENST00000399292 WDR78Q5VTH9 848 aa13.99□□□□□ -0.17
SMIM11A-201ENST00000399292 FAM227BQ96M60 508 aa13.99□□□□□ -0.17
SMIM11A-201ENST00000399292 UNC93B1Q9H1C4 597 aa13.99□□□□□ -0.17
SMIM11A-201ENST00000399292 NYAP2Q9P242 653 aa13.99□□□□□ -0.17
SMIM11A-201ENST00000399292 CLIP2Q9UDT6 1046 aa13.99□□□□□ -0.17
SMIM11A-201ENST00000399292 BAZ2AQ9UIF9 1905 aaKnown RBP13.98□□□□□ -0.17
SMIM11A-201ENST00000399292 TSPY3P0CV98 308 aa13.98□□□□□ -0.17
SMIM11A-201ENST00000399292 TSPY8P0CW00 308 aa13.98□□□□□ -0.17
SMIM11A-201ENST00000399292 CTC1Q2NKJ3 1217 aa13.98□□□□□ -0.17
SMIM11A-201ENST00000399292 VPS53Q5VIR6 699 aa13.98□□□□□ -0.17
SMIM11A-201ENST00000399292 MB21D1Q8N884 522 aa13.98□□□□□ -0.17
SMIM11A-201ENST00000399292 A0A0D9SFI3 127 aa13.97□□□□□ -0.17
SMIM11A-201ENST00000399292 F5H6K3 240 aa13.97□□□□□ -0.17
SMIM11A-201ENST00000399292 FOXP2O15409 715 aa13.97□□□□□ -0.17
SMIM11A-201ENST00000399292 SGPL1O95470 568 aa13.97□□□□□ -0.17
SMIM11A-201ENST00000399292 HMGCRP04035 888 aa13.97□□□□□ -0.17
SMIM11A-201ENST00000399292 JUNDP17535 347 aa13.97□□□□□ -0.17
SMIM11A-201ENST00000399292 CAPN2P17655 700 aa13.97□□□□□ -0.17
SMIM11A-201ENST00000399292 SDSP20132 328 aa13.97□□□□□ -0.17
SMIM11A-201ENST00000399292 RGS2P41220 211 aa13.97□□□□□ -0.17
SMIM11A-201ENST00000399292 TFAP4Q01664 338 aa13.97□□□□□ -0.17
SMIM11A-201ENST00000399292 KLRC3Q07444 240 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms