RNA–Protein interactions for RNA: ENST00000399240.5

RUNX1-205, Transcript of runt related transcription factor 1, humanhuman

TSL 3 BASIC

Gene RUNX1, Length 1,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-205ENST00000399240 INTS4Q96HW7 963 aaKnown RBP28.28■■■□□ 2.12
RUNX1-205ENST00000399240 ZCCHC17Q9NP64 241 aaKnown RBP28.28■■■□□ 2.12
RUNX1-205ENST00000399240 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.28■■■□□ 2.12
RUNX1-205ENST00000399240 STK36Q9NRP7 1315 aa28.28■■■□□ 2.12
RUNX1-205ENST00000399240 ZBTB5O15062 677 aa28.28■■■□□ 2.12
RUNX1-205ENST00000399240 PPP1R11O60927 126 aaPredicted RBP28.28■■■□□ 2.12
RUNX1-205ENST00000399240 TRIM22Q8IYM9 498 aa28.28■■■□□ 2.12
RUNX1-205ENST00000399240 ORC3Q9UBD5 711 aaPredicted RBP28.28■■■□□ 2.12
RUNX1-205ENST00000399240 ZNF536O15090 1300 aa28.27■■■□□ 2.12
RUNX1-205ENST00000399240 CCDC174Q6PII3 467 aa28.27■■■□□ 2.12
RUNX1-205ENST00000399240 PARK7Q99497 189 aaKnown RBP28.27■■■□□ 2.12
RUNX1-205ENST00000399240 PNMA6FA0A0J9YX94 578 aa28.26■■■□□ 2.11
RUNX1-205ENST00000399240 TAL1P17542 331 aaPredicted RBP28.26■■■□□ 2.11
RUNX1-205ENST00000399240 OTUD7BQ6GQQ9 843 aa28.26■■■□□ 2.11
RUNX1-205ENST00000399240 AIFM3Q96NN9 605 aa28.26■■■□□ 2.11
RUNX1-205ENST00000399240 SEC63Q9UGP8 760 aaKnown RBP28.26■■■□□ 2.11
RUNX1-205ENST00000399240 ZBED4O75132 1171 aa28.25■■■□□ 2.11
RUNX1-205ENST00000399240 DEXIO95424 95 aa28.25■■■□□ 2.11
RUNX1-205ENST00000399240 AKAP17AQ02040 695 aaKnown RBP28.25■■■□□ 2.11
RUNX1-205ENST00000399240 TMEM132BQ14DG7 1078 aa28.25■■■□□ 2.11
RUNX1-205ENST00000399240 TAF1CQ15572 869 aaPredicted RBP28.25■■■□□ 2.11
RUNX1-205ENST00000399240 REM2Q8IYK8 340 aaPredicted RBP28.25■■■□□ 2.11
RUNX1-205ENST00000399240 SMCR8Q8TEV9 937 aaPredicted RBP28.25■■■□□ 2.11
RUNX1-205ENST00000399240 TXNRD2Q9NNW7 524 aa28.25■■■□□ 2.11
RUNX1-205ENST00000399240 BTBD7Q9P203 1132 aa28.25■■■□□ 2.11
RUNX1-205ENST00000399240 SMC3Q9UQE7 1217 aa28.25■■■□□ 2.11
RUNX1-205ENST00000399240 CNMDO75829 334 aa28.24■■■□□ 2.11
RUNX1-205ENST00000399240 HSP90AA1P07900 732 aaKnown RBP28.24■■■□□ 2.11
RUNX1-205ENST00000399240 FDX1P10109 184 aa28.24■■■□□ 2.11
RUNX1-205ENST00000399240 GJB2P29033 226 aa28.24■■■□□ 2.11
RUNX1-205ENST00000399240 HMGN5P82970 282 aaKnown RBP28.24■■■□□ 2.11
RUNX1-205ENST00000399240 PFKFB3Q16875 520 aaPredicted RBP28.24■■■□□ 2.11
RUNX1-205ENST00000399240 CPXCR1Q8N123 301 aa28.24■■■□□ 2.11
RUNX1-205ENST00000399240 RAVER2Q9HCJ3 691 aaKnown RBP28.24■■■□□ 2.11
RUNX1-205ENST00000399240 RBPJLQ9UBG7 517 aa28.24■■■□□ 2.11
RUNX1-205ENST00000399240 ZNF214Q9UL59 606 aaPredicted RBP28.24■■■□□ 2.11
RUNX1-205ENST00000399240 CEP350Q5VT06 3117 aa28.24■■■□□ 2.11
RUNX1-205ENST00000399240 SCG2P13521 617 aa28.24■■■□□ 2.11
RUNX1-205ENST00000399240 GPKOWQ92917 476 aaPredicted RBP eCLIP28.24■■■□□ 2.11
RUNX1-205ENST00000399240 AGBL1Q96MI9 1066 aa28.24■■■□□ 2.11
RUNX1-205ENST00000399240 PAGR1Q9BTK6 254 aa28.24■■■□□ 2.11
RUNX1-205ENST00000399240 RBM27Q9P2N5 1060 aaKnown RBP28.24■■■□□ 2.11
RUNX1-205ENST00000399240 ADGRA2Q96PE1 1338 aa28.23■■■□□ 2.11
RUNX1-205ENST00000399240 WWC2Q6AWC2 1192 aa28.23■■■□□ 2.11
RUNX1-205ENST00000399240 MB21D1Q8N884 522 aa28.23■■■□□ 2.11
RUNX1-205ENST00000399240 ICAM1P05362 532 aa28.22■■■□□ 2.11
RUNX1-205ENST00000399240 COA7Q96BR5 231 aa28.22■■■□□ 2.11
RUNX1-205ENST00000399240 SHISA4Q96DD7 197 aa28.22■■■□□ 2.11
RUNX1-205ENST00000399240 CTDP1Q9Y5B0 961 aaPredicted RBP28.22■■■□□ 2.11
RUNX1-205ENST00000399240 CRHR2Q13324 411 aa28.21■■■□□ 2.11
RUNX1-205ENST00000399240 USH1GQ495M9 461 aa28.21■■■□□ 2.11
RUNX1-205ENST00000399240 TYW1BQ6NUM6 668 aa28.21■■■□□ 2.11
RUNX1-205ENST00000399240 HEATR3Q7Z4Q2 680 aa28.21■■■□□ 2.11
RUNX1-205ENST00000399240 FBXO11Q86XK2 927 aa28.21■■■□□ 2.11
RUNX1-205ENST00000399240 AMNQ9BXJ7 453 aa28.21■■■□□ 2.11
RUNX1-205ENST00000399240 ATP2A1O14983 1001 aa28.2■■■□□ 2.11
RUNX1-205ENST00000399240 Q3C1V9 767 aa28.2■■■□□ 2.11
RUNX1-205ENST00000399240 ANKRD13CQ8N6S4 541 aa28.2■■■□□ 2.11
RUNX1-205ENST00000399240 ALG1Q9BT22 464 aa28.2■■■□□ 2.11
RUNX1-205ENST00000399240 GJB4Q9NTQ9 266 aa28.2■■■□□ 2.11
RUNX1-205ENST00000399240 CCPG1Q9ULG6 757 aa28.2■■■□□ 2.11
RUNX1-205ENST00000399240 RABGAP1Q9Y3P9 1069 aa28.2■■■□□ 2.11
RUNX1-205ENST00000399240 ALDH1A1P00352 501 aa28.2■■■□□ 2.1
RUNX1-205ENST00000399240 GCLCP48506 637 aaPredicted RBP28.2■■■□□ 2.1
RUNX1-205ENST00000399240 OAZ1P54368 228 aa28.2■■■□□ 2.1
RUNX1-205ENST00000399240 PLS1Q14651 629 aa28.2■■■□□ 2.1
RUNX1-205ENST00000399240 SNRNP48Q6IEG0 339 aaKnown RBP28.2■■■□□ 2.1
RUNX1-205ENST00000399240 DNAJC5GQ8N7S2 189 aa28.2■■■□□ 2.1
RUNX1-205ENST00000399240 GTF3C2Q8WUA4 911 aaPredicted RBP28.2■■■□□ 2.1
RUNX1-205ENST00000399240 RIPK3Q9Y572 518 aa28.2■■■□□ 2.1
RUNX1-205ENST00000399240 PCDHA1Q9Y5I3 950 aa28.2■■■□□ 2.1
RUNX1-205ENST00000399240 CA12O43570 354 aa28.19■■■□□ 2.1
RUNX1-205ENST00000399240 FOSBP53539 338 aa28.19■■■□□ 2.1
RUNX1-205ENST00000399240 FAM184AQ8NB25 1140 aa28.19■■■□□ 2.1
RUNX1-205ENST00000399240 TEX13BQ9BXU2 312 aa28.19■■■□□ 2.1
RUNX1-205ENST00000399240 SPATC1LQ9H0A9 340 aa28.19■■■□□ 2.1
RUNX1-205ENST00000399240 R3HDMLQ9H3Y0 253 aa28.19■■■□□ 2.1
RUNX1-205ENST00000399240 ZFYVE28Q9HCC9 887 aa28.19■■■□□ 2.1
RUNX1-205ENST00000399240 BARHL2Q9NY43 387 aa28.19■■■□□ 2.1
RUNX1-205ENST00000399240 VPS54Q9P1Q0 977 aa28.19■■■□□ 2.1
RUNX1-205ENST00000399240 CPA4Q9UI42 421 aa28.19■■■□□ 2.1
RUNX1-205ENST00000399240 STXBP3O00186 592 aa28.18■■■□□ 2.1
RUNX1-205ENST00000399240 TLR2O60603 784 aa28.18■■■□□ 2.1
RUNX1-205ENST00000399240 STAT3P40763 770 aa28.18■■■□□ 2.1
RUNX1-205ENST00000399240 ERVK-9P63128 1117 aa28.17■■■□□ 2.1
RUNX1-205ENST00000399240 ERVK-24P63145 666 aa28.17■■■□□ 2.1
RUNX1-205ENST00000399240 WASF1Q92558 559 aa28.17■■■□□ 2.1
RUNX1-205ENST00000399240 IPO9Q96P70 1041 aaKnown RBP28.17■■■□□ 2.1
RUNX1-205ENST00000399240 RNF186Q9NXI6 227 aa28.17■■■□□ 2.1
RUNX1-205ENST00000399240 MORF4L1Q9UBU8 362 aa28.17■■■□□ 2.1
RUNX1-205ENST00000399240 BCRP11274 1271 aa28.16■■■□□ 2.1
RUNX1-205ENST00000399240 RBBP6Q7Z6E9 1792 aaKnown RBP28.16■■■□□ 2.1
RUNX1-205ENST00000399240 hCG_1984214I3L0E3 225 aa28.16■■■□□ 2.1
RUNX1-205ENST00000399240 ALAS1P13196 640 aa28.16■■■□□ 2.1
RUNX1-205ENST00000399240 C17orf99Q6UX52 265 aa28.16■■■□□ 2.1
RUNX1-205ENST00000399240 ZNF713Q8N859 430 aaPredicted RBP28.16■■■□□ 2.1
RUNX1-205ENST00000399240 MOV10L1Q9BXT6 1211 aaKnown RBP28.16■■■□□ 2.1
RUNX1-205ENST00000399240 HOMER2Q9NSB8 354 aa28.16■■■□□ 2.1
RUNX1-205ENST00000399240 TRPA1O75762 1119 aa28.15■■■□□ 2.1
RUNX1-205ENST00000399240 NAPAP54920 295 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms