RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 LRCH2Q5VUJ6 765 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 BRAPQ7Z569 592 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 MAPKAPK5Q8IW41 473 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 SLC16A10Q8TF71 515 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 COG1Q8WTW3 980 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 TGFBRAP1Q8WUH2 860 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 AGXT2Q9BYV1 514 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 MCM8Q9UJA3 840 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 TTF2Q9UNY4 1162 aaKnown RBP11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 HPSEQ9Y251 543 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 SCN9AQ15858 1988 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 RGPD3A6NKT7 1758 aaPredicted RBP11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 RGPD4Q7Z3J3 1758 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 C10orf71Q711Q0 1435 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 PPP1R12AO14974 1030 aaPredicted RBP11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 ZNF18P17022 549 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 MCM3P25205 808 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 MARCKSP29966 332 aaPredicted RBP11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 CDC27P30260 824 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 ELF1P32519 619 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 FNTAP49354 379 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 RBM5P52756 815 aaKnown RBP eCLIP11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 USP14P54578 494 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 RASGRP2Q7LDG7 609 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 EGFL6Q8IUX8 553 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 LARGE2Q8N3Y3 721 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 SLC44A5Q8NCS7 719 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 MIEF2Q96C03 454 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 ZNF274Q96GC6 653 aaPredicted RBP11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 C8orf76Q96K31 380 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 CAPS2Q9BXY5 557 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 NAPBQ9H115 298 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 EHD4Q9H223 541 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 PIM2Q9P1W9 311 aa11.37□□□□□ -0.59
HMGCLL1-205ENST00000398661 COL4A5P29400 1685 aa11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 GOLGA6CA6NDK9 693 aa11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 USP17L12C9JPN9 530 aa11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 USP17L21D6R901 530 aa11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 EIF3HO15372 352 aaKnown RBP eCLIP11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 GOLGA6DP0CG33 693 aa11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 IL1R1P14778 569 aa11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 NR1I3Q14994 352 aa11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 PPP2R5AQ15172 486 aa11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 DYNLL2Q96FJ2 89 aa11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 GOLGA6AQ9NYA3 693 aa11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 MYO6Q9UM54 1294 aa11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 NFE2L3Q9Y4A8 694 aa11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 BAZ2AQ9UIF9 1905 aaKnown RBP11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 H0YHG0 523 aa11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 MYO1FO00160 1098 aa11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 ZNF213O14771 459 aa11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 BMP6P22004 513 aa11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 RDXP35241 583 aaKnown RBP11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 TCP10Q12799 353 aa11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 NCAPH2Q6IBW4 605 aa11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 METTL16Q86W50 562 aaKnown RBP11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 FOXP4Q8IVH2 680 aaPredicted RBP11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 ZKSCAN4Q969J2 545 aaPredicted RBP11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 CRACR2AQ9BSW2 395 aa11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 MYL10Q9BUA6 226 aa11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 RABEP2Q9H5N1 569 aa11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 PCDHA5Q9Y5H7 936 aa11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 ATXN2Q99700 1313 aaKnown RBP11.36□□□□□ -0.59
HMGCLL1-205ENST00000398661 FAM196BA6NMK8 535 aa11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 AGPSO00116 658 aa11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 CHUKO15111 745 aa11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 NMT2O60551 498 aa11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 FSBPO95073 299 aa11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 BTDP43251 543 aa11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 GNGT1P63211 74 aa11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 SLC39A14Q15043 492 aa11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 DALRD3Q5D0E6 543 aaKnown RBP11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 SHC4Q6S5L8 630 aa11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 AMOTL1Q8IY63 956 aa11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 DSCC1Q9BVC3 393 aa11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 CD248Q9HCU0 757 aa11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 HOOK1Q9UJC3 728 aaKnown RBP11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 MTMR7Q9Y216 660 aa11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 GRIN2DO15399 1336 aa11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 BAZ2BQ9UIF8 2168 aaKnown RBP11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 KIF28PB7ZC32 967 aa11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 EGFRP00533 1210 aa11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 AMPD2Q01433 879 aa11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 FMR1Q06787 632 aaKnown RBP eCLIP11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 RBL2Q08999 1139 aa11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 CYB5R4Q7L1T6 521 aa11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 PPFIBP1Q86W92 1011 aa11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 ZFPM1Q8IX07 1006 aa11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 SAMM50Q9Y512 469 aa11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 ARAP2Q8WZ64 1704 aa11.35□□□□□ -0.59
HMGCLL1-205ENST00000398661 PATL2C9JE40 543 aaKnown RBP11.34□□□□□ -0.59
HMGCLL1-205ENST00000398661 NFKBIEO00221 500 aa11.34□□□□□ -0.59
HMGCLL1-205ENST00000398661 HMGB2P26583 209 aaKnown RBP11.34□□□□□ -0.59
HMGCLL1-205ENST00000398661 PLCD1P51178 756 aa11.34□□□□□ -0.59
HMGCLL1-205ENST00000398661 NFIAQ12857 509 aa11.34□□□□□ -0.59
HMGCLL1-205ENST00000398661 PREPLQ4J6C6 727 aaPredicted RBP11.34□□□□□ -0.59
HMGCLL1-205ENST00000398661 RBM26Q5T8P6 1007 aaKnown RBP11.34□□□□□ -0.59
HMGCLL1-205ENST00000398661 B4GALNT4Q76KP1 1039 aa11.34□□□□□ -0.59
HMGCLL1-205ENST00000398661 OTUD6BQ8N6M0 293 aa11.34□□□□□ -0.59
HMGCLL1-205ENST00000398661 WDR66Q8TBY9 1149 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms