RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 MCF2L2Q86YR7 1114 aa15.75■□□□□ 0.11
PCDHGA11-201ENST00000398587 TBC1D10CQ8IV04 446 aa15.75■□□□□ 0.11
PCDHGA11-201ENST00000398587 ALDH8A1Q9H2A2 487 aaPredicted RBP15.75■□□□□ 0.11
PCDHGA11-201ENST00000398587 SLC39A2Q9NP94 309 aa15.75■□□□□ 0.11
PCDHGA11-201ENST00000398587 PPP2R2CQ9Y2T4 447 aa15.75■□□□□ 0.11
PCDHGA11-201ENST00000398587 IVNS1ABPQ9Y6Y0 642 aa15.75■□□□□ 0.11
PCDHGA11-201ENST00000398587 GNPTABQ3T906 1256 aa15.75■□□□□ 0.11
PCDHGA11-201ENST00000398587 OTUD6AQ7L8S5 288 aa15.75■□□□□ 0.11
PCDHGA11-201ENST00000398587 DYNLL2Q96FJ2 89 aa15.75■□□□□ 0.11
PCDHGA11-201ENST00000398587 COA1Q9GZY4 146 aa15.75■□□□□ 0.11
PCDHGA11-201ENST00000398587 LARSQ9P2J5 1176 aaKnown RBP15.75■□□□□ 0.11
PCDHGA11-201ENST00000398587 OVOS2A0A0G2JMS6 1433 aa15.75■□□□□ 0.11
PCDHGA11-201ENST00000398587 PLA2G4DQ86XP0 818 aa15.75■□□□□ 0.11
PCDHGA11-201ENST00000398587 CSRNP1Q96S65 589 aa15.75■□□□□ 0.11
PCDHGA11-201ENST00000398587 NSRP1Q9H0G5 558 aaKnown RBP15.75■□□□□ 0.11
PCDHGA11-201ENST00000398587 FRMPD1Q5SYB0 1578 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 KIF4AO95239 1232 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 COPB1P53618 953 aaKnown RBP15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 PRKG1Q13976 671 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 UTP14CQ5TAP6 766 aaKnown RBP15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 GOLGA5Q8TBA6 731 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 RPGRIP1Q96KN7 1286 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 MYL1P05976 194 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 TRPC3Q13507 836 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 UBL4BQ8N7F7 174 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 PKNOX2Q96KN3 472 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 TRERF1Q96PN7 1200 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 KIF2CQ99661 725 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 DESI2Q9BSY9 194 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 HAUS4Q9H6D7 363 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 DBNDD1Q9H9R9 158 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 METTL14Q9HCE5 456 aaKnown RBP15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 CTTNBP2NLQ9P2B4 639 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 BCS1LQ9Y276 419 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 PXDNLA1KZ92 1463 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 IRX3P78415 501 aaPredicted RBP15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 LIN9Q5TKA1 542 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 NBPF11Q86T75 865 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 MB21D2Q8IYB1 491 aaPredicted RBP15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 FNBP4Q8N3X1 1017 aaPredicted RBP15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 LARP4BQ92615 738 aaKnown RBP15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 PLA2G12BQ9BX93 195 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 USP32Q8NFA0 1604 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 TLDC2A0PJX2 215 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 NPR1P16066 1061 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 STAT1P42224 750 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 ZNF772Q68DY9 489 aaPredicted RBP15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 CLEC17AQ6ZS10 378 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 ATG9AQ7Z3C6 839 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 CDAN1Q8IWY9 1227 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 TBCKQ8TEA7 893 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 PIGSQ96S52 555 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 LSM14BQ9BX40 385 aaKnown RBP15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 PCDHB6Q9Y5E3 794 aa15.74■□□□□ 0.11
PCDHGA11-201ENST00000398587 RCAN1P53805 252 aa15.73■□□□□ 0.11
PCDHGA11-201ENST00000398587 RPS6KA1Q15418 735 aa15.73■□□□□ 0.11
PCDHGA11-201ENST00000398587 FAM178BQ8IXR5 827 aa15.73■□□□□ 0.11
PCDHGA11-201ENST00000398587 SYCE1Q8N0S2 351 aa15.73■□□□□ 0.11
PCDHGA11-201ENST00000398587 DHTKD1Q96HY7 919 aaPredicted RBP15.73■□□□□ 0.11
PCDHGA11-201ENST00000398587 IQCGQ9H095 443 aaKnown RBP15.73■□□□□ 0.11
PCDHGA11-201ENST00000398587 STK36Q9NRP7 1315 aa15.73■□□□□ 0.11
PCDHGA11-201ENST00000398587 ACTN4O43707 911 aaKnown RBP15.73■□□□□ 0.11
PCDHGA11-201ENST00000398587 ADRA2BP18089 450 aa15.73■□□□□ 0.11
PCDHGA11-201ENST00000398587 ENOX1Q8TC92 643 aaKnown RBP15.73■□□□□ 0.11
PCDHGA11-201ENST00000398587 VTI1AQ96AJ9 217 aa15.73■□□□□ 0.11
PCDHGA11-201ENST00000398587 SAR1BQ9Y6B6 198 aa15.73■□□□□ 0.11
PCDHGA11-201ENST00000398587 CEP104O60308 925 aa15.73■□□□□ 0.11
PCDHGA11-201ENST00000398587 PRDX5P30044 214 aa15.73■□□□□ 0.11
PCDHGA11-201ENST00000398587 CFAP221Q4G0U5 840 aa15.73■□□□□ 0.11
PCDHGA11-201ENST00000398587 USP17L2Q6R6M4 530 aa15.73■□□□□ 0.11
PCDHGA11-201ENST00000398587 IFT20Q8IY31 132 aa15.73■□□□□ 0.11
PCDHGA11-201ENST00000398587 TRIM58Q8NG06 486 aa15.73■□□□□ 0.11
PCDHGA11-201ENST00000398587 CELF1Q92879 486 aaKnown RBP15.73■□□□□ 0.11
PCDHGA11-201ENST00000398587 TEKT3Q9BXF9 490 aa15.73■□□□□ 0.11
PCDHGA11-201ENST00000398587 EEF1GP26641 437 aaKnown RBP15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 CDK8P49336 464 aa15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 CCDC25Q86WR0 208 aa15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 GPIHBP1Q8IV16 184 aa15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 FAM76AQ8TAV0 307 aa15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 PI4KBQ9UBF8 816 aa15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 NRBP1Q9UHY1 535 aa15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 PYCARDQ9ULZ3 195 aa15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 RIPOR2Q9Y4F9 1068 aa15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 TESPA1A2RU30 521 aaPredicted RBP15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 RNASE9P60153 205 aaKnown RBP15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 TMTC3Q6ZXV5 915 aa15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 STK17AQ9UEE5 414 aa15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 CSADQ9Y600 493 aa15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 CEMIPQ8WUJ3 1361 aa15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 BRDTQ58F21 947 aaPredicted RBP15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 ARL6IP4Q66PJ3 421 aaKnown RBP15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 RSPH14Q9UHP6 348 aa15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 MAN1B1Q9UKM7 699 aa15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 ZHX1Q9UKY1 873 aaPredicted RBP15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 KIAA1024Q9UPX6 916 aa15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 CPDO75976 1380 aa15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 USP17L3A6NCW0 530 aa15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 USP17L4A6NCW7 530 aa15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 USP17L1Q7RTZ2 530 aa15.72■□□□□ 0.11
PCDHGA11-201ENST00000398587 RDH13Q8NBN7 331 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms