RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 EMILIN3Q9NT22 766 aa22.15■■□□□ 1.14
PDLIM2-204ENST00000397760 hCG_1984214I3L0E3 225 aa22.14■■□□□ 1.13
PDLIM2-204ENST00000397760 TRAF5O00463 557 aa22.14■■□□□ 1.13
PDLIM2-204ENST00000397760 CALML3P27482 149 aa22.14■■□□□ 1.13
PDLIM2-204ENST00000397760 NAPAP54920 295 aa22.14■■□□□ 1.13
PDLIM2-204ENST00000397760 NR5A1Q13285 461 aa22.14■■□□□ 1.13
PDLIM2-204ENST00000397760 NPY5RQ15761 445 aa22.14■■□□□ 1.13
PDLIM2-204ENST00000397760 ARMC9Q7Z3E5 817 aa22.14■■□□□ 1.13
PDLIM2-204ENST00000397760 NOSTRINQ8IVI9 506 aa22.14■■□□□ 1.13
PDLIM2-204ENST00000397760 ANKRD13AQ8IZ07 590 aa22.14■■□□□ 1.13
PDLIM2-204ENST00000397760 FAM177A1Q8N128 213 aaPredicted RBP22.14■■□□□ 1.13
PDLIM2-204ENST00000397760 ZNF713Q8N859 430 aaPredicted RBP22.14■■□□□ 1.13
PDLIM2-204ENST00000397760 CCDC12Q8WUD4 166 aaPredicted RBP22.14■■□□□ 1.13
PDLIM2-204ENST00000397760 WDR46O15213 610 aaKnown RBP22.13■■□□□ 1.13
PDLIM2-204ENST00000397760 DGKZQ13574 1117 aa22.13■■□□□ 1.13
PDLIM2-204ENST00000397760 CDC37Q16543 378 aaPredicted RBP22.13■■□□□ 1.13
PDLIM2-204ENST00000397760 MYSM1Q5VVJ2 828 aa22.13■■□□□ 1.13
PDLIM2-204ENST00000397760 ZNF396Q96N95 335 aaPredicted RBP22.13■■□□□ 1.13
PDLIM2-204ENST00000397760 FEM1BQ9UK73 627 aa22.13■■□□□ 1.13
PDLIM2-204ENST00000397760 PRR12Q9ULL5 1215 aa22.13■■□□□ 1.13
PDLIM2-204ENST00000397760 AFG3L2Q9Y4W6 797 aa22.13■■□□□ 1.13
PDLIM2-204ENST00000397760 MYH6P13533 1939 aa22.13■■□□□ 1.13
PDLIM2-204ENST00000397760 PLA2G6O60733 806 aa22.13■■□□□ 1.13
PDLIM2-204ENST00000397760 QRICH1Q2TAL8 776 aa22.13■■□□□ 1.13
PDLIM2-204ENST00000397760 FAM160B2Q86V87 743 aa22.13■■□□□ 1.13
PDLIM2-204ENST00000397760 COA7Q96BR5 231 aa22.13■■□□□ 1.13
PDLIM2-204ENST00000397760 CFAP45Q9UL16 551 aa22.13■■□□□ 1.13
PDLIM2-204ENST00000397760 C19orf81C9J6K1 198 aa22.12■■□□□ 1.13
PDLIM2-204ENST00000397760 PPP1R11O60927 126 aaPredicted RBP22.12■■□□□ 1.13
PDLIM2-204ENST00000397760 SNAP25P60880 206 aa22.12■■□□□ 1.13
PDLIM2-204ENST00000397760 FMR1Q06787 632 aaKnown RBP eCLIP22.12■■□□□ 1.13
PDLIM2-204ENST00000397760 ATL3Q6DD88 541 aa22.12■■□□□ 1.13
PDLIM2-204ENST00000397760 ZNF408Q9H9D4 720 aa22.12■■□□□ 1.13
PDLIM2-204ENST00000397760 GALNT17Q6IS24 598 aa22.11■■□□□ 1.13
PDLIM2-204ENST00000397760 KIFC2Q96AC6 838 aa22.11■■□□□ 1.13
PDLIM2-204ENST00000397760 ZMYND12Q9H0C1 365 aa22.11■■□□□ 1.13
PDLIM2-204ENST00000397760 ELP3Q9H9T3 547 aa22.11■■□□□ 1.13
PDLIM2-204ENST00000397760 PCDHA4Q9UN74 947 aa22.11■■□□□ 1.13
PDLIM2-204ENST00000397760 SMCO2A6NFE2 343 aa22.1■■□□□ 1.13
PDLIM2-204ENST00000397760 VCAM1P19320 739 aa22.1■■□□□ 1.13
PDLIM2-204ENST00000397760 HMGCS2P54868 508 aa22.1■■□□□ 1.13
PDLIM2-204ENST00000397760 CEBPZQ03701 1054 aaKnown RBP22.1■■□□□ 1.13
PDLIM2-204ENST00000397760 BLIDQ8IZY5 108 aa22.1■■□□□ 1.13
PDLIM2-204ENST00000397760 CLMNQ96JQ2 1002 aa22.1■■□□□ 1.13
PDLIM2-204ENST00000397760 FBXO28Q9NVF7 368 aa22.1■■□□□ 1.13
PDLIM2-204ENST00000397760 PTMAP06454 111 aaKnown RBP22.1■■□□□ 1.13
PDLIM2-204ENST00000397760 C12orf42Q96LP6 360 aa22.1■■□□□ 1.13
PDLIM2-204ENST00000397760 USP28Q96RU2 1077 aa22.1■■□□□ 1.13
PDLIM2-204ENST00000397760 C6orf50Q9HD87 102 aa22.1■■□□□ 1.13
PDLIM2-204ENST00000397760 ADAMTS3O15072 1205 aa22.09■■□□□ 1.13
PDLIM2-204ENST00000397760 GNA11P29992 359 aa22.09■■□□□ 1.13
PDLIM2-204ENST00000397760 SAMD1Q6SPF0 538 aaPredicted RBP22.09■■□□□ 1.13
PDLIM2-204ENST00000397760 DAGLBQ8NCG7 672 aa22.09■■□□□ 1.13
PDLIM2-204ENST00000397760 RBM46Q8TBY0 533 aaKnown RBP22.09■■□□□ 1.13
PDLIM2-204ENST00000397760 CNKSR2Q8WXI2 1034 aa22.09■■□□□ 1.13
PDLIM2-204ENST00000397760 TNFRSF25Q93038 417 aa22.09■■□□□ 1.13
PDLIM2-204ENST00000397760 FTOQ9C0B1 505 aaKnown RBP eCLIP22.09■■□□□ 1.13
PDLIM2-204ENST00000397760 RPAP3Q9H6T3 665 aaPredicted RBP22.09■■□□□ 1.13
PDLIM2-204ENST00000397760 ESYT2A0FGR8 921 aa22.08■■□□□ 1.13
PDLIM2-204ENST00000397760 CCDC192P0DO97 292 aa22.08■■□□□ 1.13
PDLIM2-204ENST00000397760 PPATQ06203 517 aa22.08■■□□□ 1.13
PDLIM2-204ENST00000397760 LDLRAD1Q5T700 205 aa22.08■■□□□ 1.13
PDLIM2-204ENST00000397760 PPP1R18Q6NYC8 613 aa22.08■■□□□ 1.13
PDLIM2-204ENST00000397760 ERO1BQ86YB8 467 aa22.08■■□□□ 1.13
PDLIM2-204ENST00000397760 SPATA32Q96LK8 384 aa22.08■■□□□ 1.13
PDLIM2-204ENST00000397760 AMNQ9BXJ7 453 aa22.08■■□□□ 1.13
PDLIM2-204ENST00000397760 TANGO6Q9C0B7 1094 aa22.08■■□□□ 1.13
PDLIM2-204ENST00000397760 TMOD4Q9NZQ9 345 aa22.08■■□□□ 1.13
PDLIM2-204ENST00000397760 PCDHA1Q9Y5I3 950 aa22.08■■□□□ 1.13
PDLIM2-204ENST00000397760 RRP9O43818 475 aaKnown RBP22.08■■□□□ 1.12
PDLIM2-204ENST00000397760 FBXO11Q86XK2 927 aa22.08■■□□□ 1.12
PDLIM2-204ENST00000397760 SH3D19Q5HYK7 790 aa22.07■■□□□ 1.12
PDLIM2-204ENST00000397760 EARS2Q5JPH6 523 aaKnown RBP22.07■■□□□ 1.12
PDLIM2-204ENST00000397760 PRPF38AQ8NAV1 312 aaKnown RBP22.07■■□□□ 1.12
PDLIM2-204ENST00000397760 LEO1Q8WVC0 666 aaPredicted RBP22.07■■□□□ 1.12
PDLIM2-204ENST00000397760 OTUD5Q96G74 571 aa22.07■■□□□ 1.12
PDLIM2-204ENST00000397760 SLF1Q9BQI6 1058 aa22.07■■□□□ 1.12
PDLIM2-204ENST00000397760 RANBP17Q9H2T7 1088 aaKnown RBP22.07■■□□□ 1.12
PDLIM2-204ENST00000397760 RTEL1Q9NZ71 1219 aa22.07■■□□□ 1.12
PDLIM2-204ENST00000397760 CLIC4Q9Y696 253 aa22.07■■□□□ 1.12
PDLIM2-204ENST00000397760 SPDYE5A6NIY4 337 aa22.06■■□□□ 1.12
PDLIM2-204ENST00000397760 M0R2N6 131 aa22.06■■□□□ 1.12
PDLIM2-204ENST00000397760 FLOT1O75955 427 aa22.06■■□□□ 1.12
PDLIM2-204ENST00000397760 TPM3P06753 285 aa22.06■■□□□ 1.12
PDLIM2-204ENST00000397760 NOM1Q5C9Z4 860 aaKnown RBP22.06■■□□□ 1.12
PDLIM2-204ENST00000397760 RILPL1Q5EBL4 403 aa22.06■■□□□ 1.12
PDLIM2-204ENST00000397760 DDX19AQ9NUU7 478 aaKnown RBP22.06■■□□□ 1.12
PDLIM2-204ENST00000397760 PCDHA6Q9UN73 950 aa22.06■■□□□ 1.12
PDLIM2-204ENST00000397760 PCDHA8Q9Y5H6 950 aa22.06■■□□□ 1.12
PDLIM2-204ENST00000397760 FAM205CA6NFA0 338 aa22.06■■□□□ 1.12
PDLIM2-204ENST00000397760 ADCY7P51828 1080 aa22.06■■□□□ 1.12
PDLIM2-204ENST00000397760 CHADLQ6NUI6 762 aa22.06■■□□□ 1.12
PDLIM2-204ENST00000397760 BICD2Q8TD16 824 aa22.06■■□□□ 1.12
PDLIM2-204ENST00000397760 RASGRP4Q8TDF6 673 aa22.06■■□□□ 1.12
PDLIM2-204ENST00000397760 POLR3EQ9NVU0 708 aa22.06■■□□□ 1.12
PDLIM2-204ENST00000397760 RCOR1Q9UKL0 485 aa22.06■■□□□ 1.12
PDLIM2-204ENST00000397760 PAPPA2Q9BXP8 1791 aa22.06■■□□□ 1.12
PDLIM2-204ENST00000397760 IRF6O14896 467 aa22.05■■□□□ 1.12
PDLIM2-204ENST00000397760 ADCY5O95622 1261 aa22.05■■□□□ 1.12
PDLIM2-204ENST00000397760 TOB1P50616 345 aaPredicted RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms