RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 hCG_1642624A0A1W2PR95 340 aa19.59■□□□□ 0.73
TSPAN4-205ENST00000397406 PDHXO00330 501 aa19.59■□□□□ 0.73
TSPAN4-205ENST00000397406 BACE1P56817 501 aa19.59■□□□□ 0.73
TSPAN4-205ENST00000397406 AKAP17AQ02040 695 aaKnown RBP19.59■□□□□ 0.73
TSPAN4-205ENST00000397406 WASF1Q92558 559 aa19.59■□□□□ 0.73
TSPAN4-205ENST00000397406 LPAR1Q92633 364 aa19.59■□□□□ 0.73
TSPAN4-205ENST00000397406 EFCC1Q9HA90 598 aa19.59■□□□□ 0.73
TSPAN4-205ENST00000397406 RBM27Q9P2N5 1060 aaKnown RBP19.59■□□□□ 0.73
TSPAN4-205ENST00000397406 A0A0G2JLL6 359 aaPredicted RBP19.58■□□□□ 0.72
TSPAN4-205ENST00000397406 TRIM75PA6NK02 468 aa19.58■□□□□ 0.72
TSPAN4-205ENST00000397406 CXCL11O14625 94 aa19.58■□□□□ 0.72
TSPAN4-205ENST00000397406 SLC16A2P36021 539 aa19.58■□□□□ 0.72
TSPAN4-205ENST00000397406 FOSBP53539 338 aa19.58■□□□□ 0.72
TSPAN4-205ENST00000397406 USP14P54578 494 aa19.58■□□□□ 0.72
TSPAN4-205ENST00000397406 PFKFB3Q16875 520 aaPredicted RBP19.58■□□□□ 0.72
TSPAN4-205ENST00000397406 FAM83BQ5T0W9 1011 aa19.58■□□□□ 0.72
TSPAN4-205ENST00000397406 BTNL9Q6UXG8 535 aa19.58■□□□□ 0.72
TSPAN4-205ENST00000397406 PRRT2Q7Z6L0 340 aaPredicted RBP19.58■□□□□ 0.72
TSPAN4-205ENST00000397406 ADGRF4Q8IZF3 695 aa19.58■□□□□ 0.72
TSPAN4-205ENST00000397406 RGS22Q8NE09 1264 aa19.58■□□□□ 0.72
TSPAN4-205ENST00000397406 C8orf76Q96K31 380 aa19.58■□□□□ 0.72
TSPAN4-205ENST00000397406 EMILIN3Q9NT22 766 aa19.58■□□□□ 0.72
TSPAN4-205ENST00000397406 CPA4Q9UI42 421 aa19.58■□□□□ 0.72
TSPAN4-205ENST00000397406 BRCA2P51587 3418 aa19.57■□□□□ 0.72
TSPAN4-205ENST00000397406 RLFQ13129 1914 aa19.57■□□□□ 0.72
TSPAN4-205ENST00000397406 VPS37CA5D8V6 355 aaPredicted RBP19.57■□□□□ 0.72
TSPAN4-205ENST00000397406 C19orf81C9J6K1 198 aa19.57■□□□□ 0.72
TSPAN4-205ENST00000397406 WDR46O15213 610 aaKnown RBP19.57■□□□□ 0.72
TSPAN4-205ENST00000397406 SCG2P13521 617 aa19.57■□□□□ 0.72
TSPAN4-205ENST00000397406 FBXO18Q8NFZ0 1043 aa19.57■□□□□ 0.72
TSPAN4-205ENST00000397406 MTMR8Q96EF0 704 aa19.57■□□□□ 0.72
TSPAN4-205ENST00000397406 C12orf42Q96LP6 360 aa19.57■□□□□ 0.72
TSPAN4-205ENST00000397406 JMJD4Q9H9V9 463 aa19.57■□□□□ 0.72
TSPAN4-205ENST00000397406 GJB4Q9NTQ9 266 aa19.57■□□□□ 0.72
TSPAN4-205ENST00000397406 TMEM232C9JQI7 657 aa19.56■□□□□ 0.72
TSPAN4-205ENST00000397406 ZSCAN22P10073 491 aaPredicted RBP19.56■□□□□ 0.72
TSPAN4-205ENST00000397406 CYP2C8P10632 490 aa19.56■□□□□ 0.72
TSPAN4-205ENST00000397406 LACTBP83111 547 aaPredicted RBP19.56■□□□□ 0.72
TSPAN4-205ENST00000397406 SH3D19Q5HYK7 790 aa19.56■□□□□ 0.72
TSPAN4-205ENST00000397406 PIBF1Q8WXW3 757 aa19.56■□□□□ 0.72
TSPAN4-205ENST00000397406 SHISA4Q96DD7 197 aa19.56■□□□□ 0.72
TSPAN4-205ENST00000397406 RRP36Q96EU6 259 aaKnown RBP19.56■□□□□ 0.72
TSPAN4-205ENST00000397406 ISY1Q9ULR0 285 aaKnown RBP19.56■□□□□ 0.72
TSPAN4-205ENST00000397406 H3BQV1 296 aa19.55■□□□□ 0.72
TSPAN4-205ENST00000397406 PLA2G6O60733 806 aa19.55■□□□□ 0.72
TSPAN4-205ENST00000397406 HMGCS2P54868 508 aa19.55■□□□□ 0.72
TSPAN4-205ENST00000397406 PIGSQ96S52 555 aa19.55■□□□□ 0.72
TSPAN4-205ENST00000397406 VAT1LQ9HCJ6 419 aa19.55■□□□□ 0.72
TSPAN4-205ENST00000397406 PTCH2Q9Y6C5 1203 aa19.55■□□□□ 0.72
TSPAN4-205ENST00000397406 POTEFA5A3E0 1075 aa19.54■□□□□ 0.72
TSPAN4-205ENST00000397406 ECM2O94769 699 aaPredicted RBP19.54■□□□□ 0.72
TSPAN4-205ENST00000397406 VCAM1P19320 739 aa19.54■□□□□ 0.72
TSPAN4-205ENST00000397406 STAT2P52630 851 aa19.54■□□□□ 0.72
TSPAN4-205ENST00000397406 GUCY1B3Q02153 619 aa19.54■□□□□ 0.72
TSPAN4-205ENST00000397406 SYDE2Q5VT97 1194 aa19.54■□□□□ 0.72
TSPAN4-205ENST00000397406 FOXD4L5Q5VV16 416 aaPredicted RBP19.54■□□□□ 0.72
TSPAN4-205ENST00000397406 KRT40Q6A162 431 aa19.54■□□□□ 0.72
TSPAN4-205ENST00000397406 HOMER1Q86YM7 354 aa19.54■□□□□ 0.72
TSPAN4-205ENST00000397406 FOXD4L4Q8WXT5 416 aaPredicted RBP19.54■□□□□ 0.72
TSPAN4-205ENST00000397406 ARMC5Q96C12 935 aa19.54■□□□□ 0.72
TSPAN4-205ENST00000397406 TCHHQ07283 1943 aa19.53■□□□□ 0.72
TSPAN4-205ENST00000397406 F13A1P00488 732 aa19.53■□□□□ 0.72
TSPAN4-205ENST00000397406 BCRP11274 1271 aa19.53■□□□□ 0.72
TSPAN4-205ENST00000397406 FAM160B2Q86V87 743 aa19.53■□□□□ 0.72
TSPAN4-205ENST00000397406 CHURC1Q8WUH1 139 aa19.53■□□□□ 0.72
TSPAN4-205ENST00000397406 VPS54Q9P1Q0 977 aa19.53■□□□□ 0.72
TSPAN4-205ENST00000397406 FEM1BQ9UK73 627 aa19.53■□□□□ 0.72
TSPAN4-205ENST00000397406 PRR12Q9ULL5 1215 aa19.53■□□□□ 0.72
TSPAN4-205ENST00000397406 COL11A1P12107 1806 aaPredicted RBP19.53■□□□□ 0.72
TSPAN4-205ENST00000397406 IKQ13123 557 aaPredicted RBP19.52■□□□□ 0.72
TSPAN4-205ENST00000397406 TRIM29Q14134 588 aa19.52■□□□□ 0.72
TSPAN4-205ENST00000397406 TREML2Q5T2D2 321 aa19.52■□□□□ 0.72
TSPAN4-205ENST00000397406 WWC2Q6AWC2 1192 aa19.52■□□□□ 0.72
TSPAN4-205ENST00000397406 GPKOWQ92917 476 aaPredicted RBP eCLIP19.52■□□□□ 0.72
TSPAN4-205ENST00000397406 TNPO1Q92973 898 aaKnown RBP19.52■□□□□ 0.72
TSPAN4-205ENST00000397406 TRIM47Q96LD4 638 aa19.52■□□□□ 0.72
TSPAN4-205ENST00000397406 RPAP3Q9H6T3 665 aaPredicted RBP19.52■□□□□ 0.72
TSPAN4-205ENST00000397406 SH3GLB2Q9NR46 395 aa19.52■□□□□ 0.72
TSPAN4-205ENST00000397406 FBXO28Q9NVF7 368 aa19.52■□□□□ 0.72
TSPAN4-205ENST00000397406 SEC63Q9UGP8 760 aaKnown RBP19.52■□□□□ 0.72
TSPAN4-205ENST00000397406 MKI67P46013 3256 aaKnown RBP19.52■□□□□ 0.72
TSPAN4-205ENST00000397406 PNMA6FA0A0J9YX94 578 aa19.51■□□□□ 0.71
TSPAN4-205ENST00000397406 STXBP3O00186 592 aa19.51■□□□□ 0.71
TSPAN4-205ENST00000397406 ZBTB5O15062 677 aa19.51■□□□□ 0.71
TSPAN4-205ENST00000397406 MMP1P03956 469 aa19.51■□□□□ 0.71
TSPAN4-205ENST00000397406 PHF20Q9BVI0 1012 aa19.51■□□□□ 0.71
TSPAN4-205ENST00000397406 BARHL2Q9NY43 387 aa19.51■□□□□ 0.71
TSPAN4-205ENST00000397406 TMOD4Q9NZQ9 345 aa19.51■□□□□ 0.71
TSPAN4-205ENST00000397406 KCNJ14Q9UNX9 436 aa19.51■□□□□ 0.71
TSPAN4-205ENST00000397406 SMCHD1A6NHR9 2005 aa19.51■□□□□ 0.71
TSPAN4-205ENST00000397406 hCG_1984214I3L0E3 225 aa19.51■□□□□ 0.71
TSPAN4-205ENST00000397406 PPP1R11O60927 126 aaPredicted RBP19.51■□□□□ 0.71
TSPAN4-205ENST00000397406 XBP1P17861 261 aa19.51■□□□□ 0.71
TSPAN4-205ENST00000397406 RESTQ13127 1097 aa19.51■□□□□ 0.71
TSPAN4-205ENST00000397406 CDC37Q16543 378 aaPredicted RBP19.51■□□□□ 0.71
TSPAN4-205ENST00000397406 QRICH1Q2TAL8 776 aa19.51■□□□□ 0.71
TSPAN4-205ENST00000397406 TYW1BQ6NUM6 668 aa19.51■□□□□ 0.71
TSPAN4-205ENST00000397406 GADL1Q6ZQY3 521 aa19.51■□□□□ 0.71
TSPAN4-205ENST00000397406 HEATR3Q7Z4Q2 680 aa19.51■□□□□ 0.71
TSPAN4-205ENST00000397406 FERMT3Q86UX7 667 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms