RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 MCM3APO60318 1980 aa11.41□□□□□ -0.58
NEDD9-203ENST00000397378 ADCY6O43306 1168 aa11.41□□□□□ -0.58
NEDD9-203ENST00000397378 B4GALT4O60513 344 aa11.41□□□□□ -0.58
NEDD9-203ENST00000397378 SNAI1O95863 264 aaPredicted RBP11.41□□□□□ -0.58
NEDD9-203ENST00000397378 ATP8B2P98198 1209 aa11.41□□□□□ -0.58
NEDD9-203ENST00000397378 BEX3Q00994 111 aa11.41□□□□□ -0.58
NEDD9-203ENST00000397378 ITGA7Q13683 1181 aa11.41□□□□□ -0.58
NEDD9-203ENST00000397378 CXCL17Q6UXB2 119 aa11.41□□□□□ -0.58
NEDD9-203ENST00000397378 RIOX2Q8IUF8 465 aa11.41□□□□□ -0.58
NEDD9-203ENST00000397378 HERC6Q8IVU3 1022 aa11.41□□□□□ -0.58
NEDD9-203ENST00000397378 MSL3Q8N5Y2 521 aaKnown RBP11.41□□□□□ -0.58
NEDD9-203ENST00000397378 TRPV6Q9H1D0 765 aa11.41□□□□□ -0.58
NEDD9-203ENST00000397378 UPF3AQ9H1J1 476 aaKnown RBP11.41□□□□□ -0.58
NEDD9-203ENST00000397378 FAM86C1Q9NVL1 165 aa11.41□□□□□ -0.58
NEDD9-203ENST00000397378 LMCD1Q9NZU5 365 aa11.41□□□□□ -0.58
NEDD9-203ENST00000397378 SCN5AQ14524 2016 aa11.41□□□□□ -0.58
NEDD9-203ENST00000397378 C5orf42Q9H799 3197 aa11.41□□□□□ -0.58
NEDD9-203ENST00000397378 ZDBF2Q9HCK1 2354 aa11.41□□□□□ -0.58
NEDD9-203ENST00000397378 SURF6O75683 361 aaKnown RBP11.4□□□□□ -0.58
NEDD9-203ENST00000397378 POLR3DP05423 398 aaPredicted RBP11.4□□□□□ -0.58
NEDD9-203ENST00000397378 ACVR2BQ13705 512 aa11.4□□□□□ -0.58
NEDD9-203ENST00000397378 PUS10Q3MIT2 529 aaKnown RBP11.4□□□□□ -0.58
NEDD9-203ENST00000397378 CCDC144BQ3MJ40 725 aa11.4□□□□□ -0.58
NEDD9-203ENST00000397378 KIAA1755Q5JYT7 1200 aa11.4□□□□□ -0.58
NEDD9-203ENST00000397378 IER5LQ5T953 404 aa11.4□□□□□ -0.58
NEDD9-203ENST00000397378 TMEM179Q6ZVK1 233 aa11.4□□□□□ -0.58
NEDD9-203ENST00000397378 SPICE1Q8N0Z3 855 aa11.4□□□□□ -0.58
NEDD9-203ENST00000397378 SLC43A3Q8NBI5 491 aa11.4□□□□□ -0.58
NEDD9-203ENST00000397378 PHOSPHO2Q8TCD6 241 aa11.4□□□□□ -0.58
NEDD9-203ENST00000397378 EAF2Q96CJ1 260 aaPredicted RBP11.4□□□□□ -0.58
NEDD9-203ENST00000397378 VWCEQ96DN2 955 aa11.4□□□□□ -0.58
NEDD9-203ENST00000397378 TLR7Q9NYK1 1049 aaKnown RBP11.4□□□□□ -0.58
NEDD9-203ENST00000397378 MTUS1Q9ULD2 1270 aa11.4□□□□□ -0.58
NEDD9-203ENST00000397378 ADAMTS5Q9UNA0 930 aa11.4□□□□□ -0.58
NEDD9-203ENST00000397378 TNNQ9UQP3 1299 aa11.4□□□□□ -0.58
NEDD9-203ENST00000397378 WDR46O15213 610 aaKnown RBP11.39□□□□□ -0.59
NEDD9-203ENST00000397378 DDX11Q96FC9 970 aa11.39□□□□□ -0.59
NEDD9-203ENST00000397378 AGBL1Q96MI9 1066 aa11.39□□□□□ -0.59
NEDD9-203ENST00000397378 PRRX2Q99811 253 aa11.39□□□□□ -0.59
NEDD9-203ENST00000397378 UPF3BQ9BZI7 483 aaKnown RBP11.39□□□□□ -0.59
NEDD9-203ENST00000397378 CRNKL1Q9BZJ0 848 aaKnown RBP11.39□□□□□ -0.59
NEDD9-203ENST00000397378 CCDC8Q9H0W5 538 aaPredicted RBP11.39□□□□□ -0.59
NEDD9-203ENST00000397378 ANTXR1Q9H6X2 564 aa11.39□□□□□ -0.59
NEDD9-203ENST00000397378 SH2D4AQ9H788 454 aa11.39□□□□□ -0.59
NEDD9-203ENST00000397378 TMX2Q9Y320 296 aa11.39□□□□□ -0.59
NEDD9-203ENST00000397378 MYH7P12883 1935 aa11.39□□□□□ -0.59
NEDD9-203ENST00000397378 MAGEB6P1A0A0J9YX57 407 aa11.38□□□□□ -0.59
NEDD9-203ENST00000397378 H3BQ06 376 aaPredicted RBP11.38□□□□□ -0.59
NEDD9-203ENST00000397378 CABYRO75952 493 aa11.38□□□□□ -0.59
NEDD9-203ENST00000397378 STAT3P40763 770 aa11.38□□□□□ -0.59
NEDD9-203ENST00000397378 ZP2Q05996 745 aa11.38□□□□□ -0.59
NEDD9-203ENST00000397378 MAMDC4Q6UXC1 1216 aa11.38□□□□□ -0.59
NEDD9-203ENST00000397378 EP400NLQ6ZTU2 488 aa11.38□□□□□ -0.59
NEDD9-203ENST00000397378 NOL8Q76FK4 1167 aaKnown RBP11.38□□□□□ -0.59
NEDD9-203ENST00000397378 ERMP1Q7Z2K6 904 aa11.38□□□□□ -0.59
NEDD9-203ENST00000397378 SIAH1Q8IUQ4 282 aa11.38□□□□□ -0.59
NEDD9-203ENST00000397378 CLUAP1Q96AJ1 413 aa11.38□□□□□ -0.59
NEDD9-203ENST00000397378 ABHD16BQ9H3Z7 469 aa11.38□□□□□ -0.59
NEDD9-203ENST00000397378 VCPKMTQ9H867 229 aa11.38□□□□□ -0.59
NEDD9-203ENST00000397378 ARHGEF10LQ9HCE6 1279 aa11.38□□□□□ -0.59
NEDD9-203ENST00000397378 MCM9Q9NXL9 1143 aa11.38□□□□□ -0.59
NEDD9-203ENST00000397378 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.38□□□□□ -0.59
NEDD9-203ENST00000397378 SWAP70Q9UH65 585 aa11.38□□□□□ -0.59
NEDD9-203ENST00000397378 FAM50BQ9Y247 325 aa11.38□□□□□ -0.59
NEDD9-203ENST00000397378 LCHNA4D1U4 455 aa11.37□□□□□ -0.59
NEDD9-203ENST00000397378 CTAGE5O15320 804 aa11.37□□□□□ -0.59
NEDD9-203ENST00000397378 BCAR3O75815 825 aa11.37□□□□□ -0.59
NEDD9-203ENST00000397378 COPB2P35606 906 aa11.37□□□□□ -0.59
NEDD9-203ENST00000397378 PSMC6P62333 389 aa11.37□□□□□ -0.59
NEDD9-203ENST00000397378 EVX2Q03828 476 aa11.37□□□□□ -0.59
NEDD9-203ENST00000397378 TCF15Q12870 199 aa11.37□□□□□ -0.59
NEDD9-203ENST00000397378 TTF1Q15361 905 aaPredicted RBP11.37□□□□□ -0.59
NEDD9-203ENST00000397378 SUGP1Q8IWZ8 645 aaKnown RBP11.37□□□□□ -0.59
NEDD9-203ENST00000397378 TMEM57Q8N5G2 664 aa11.37□□□□□ -0.59
NEDD9-203ENST00000397378 FRAT1Q92837 279 aaPredicted RBP11.37□□□□□ -0.59
NEDD9-203ENST00000397378 ZBED2Q9BTP6 218 aa11.37□□□□□ -0.59
NEDD9-203ENST00000397378 FTOQ9C0B1 505 aaKnown RBP eCLIP11.37□□□□□ -0.59
NEDD9-203ENST00000397378 SUGCTQ9HAC7 445 aa11.37□□□□□ -0.59
NEDD9-203ENST00000397378 DCP1AQ9NPI6 582 aaPredicted RBP11.37□□□□□ -0.59
NEDD9-203ENST00000397378 MUTYHQ9UIF7 546 aa11.37□□□□□ -0.59
NEDD9-203ENST00000397378 PTPRSQ13332 1948 aa11.37□□□□□ -0.59
NEDD9-203ENST00000397378 GRIN2DO15399 1336 aa11.36□□□□□ -0.59
NEDD9-203ENST00000397378 CYP2C9P11712 490 aa11.36□□□□□ -0.59
NEDD9-203ENST00000397378 IRS1P35568 1242 aa11.36□□□□□ -0.59
NEDD9-203ENST00000397378 KCNJ6P48051 423 aa11.36□□□□□ -0.59
NEDD9-203ENST00000397378 SLC4A3P48751 1232 aa11.36□□□□□ -0.59
NEDD9-203ENST00000397378 ICA1Q05084 483 aa11.36□□□□□ -0.59
NEDD9-203ENST00000397378 NEK9Q8TD19 979 aa11.36□□□□□ -0.59
NEDD9-203ENST00000397378 CCDC17Q96LX7 622 aa11.36□□□□□ -0.59
NEDD9-203ENST00000397378 SEZ6LQ9BYH1 1024 aa11.36□□□□□ -0.59
NEDD9-203ENST00000397378 FBXO28Q9NVF7 368 aa11.36□□□□□ -0.59
NEDD9-203ENST00000397378 PRKAG3Q9UGI9 489 aa11.36□□□□□ -0.59
NEDD9-203ENST00000397378 ZNF214Q9UL59 606 aaPredicted RBP11.36□□□□□ -0.59
NEDD9-203ENST00000397378 SIP14410 1827 aa11.36□□□□□ -0.59
NEDD9-203ENST00000397378 GREB1LQ9C091 1923 aaPredicted RBP11.36□□□□□ -0.59
NEDD9-203ENST00000397378 TANC1Q9C0D5 1861 aa11.36□□□□□ -0.59
NEDD9-203ENST00000397378 MYH4Q9Y623 1939 aa11.35□□□□□ -0.59
NEDD9-203ENST00000397378 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.35□□□□□ -0.59
NEDD9-203ENST00000397378 VWA5AO00534 786 aa11.35□□□□□ -0.59
NEDD9-203ENST00000397378 ZEB2O60315 1214 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms