RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 SENP2Q9HC62 589 aa15.42■□□□□ 0.06
SEC13-209ENST00000397117 METAP2P50579 478 aaKnown RBP eCLIP15.41■□□□□ 0.061e-7■■□□□ 13.6
SEC13-209ENST00000397117 SCRN1Q12765 414 aa15.41■□□□□ 0.06
SEC13-209ENST00000397117 LRRC26Q2I0M4 334 aa15.41■□□□□ 0.06
SEC13-209ENST00000397117 APOA5Q6Q788 366 aa15.41■□□□□ 0.06
SEC13-209ENST00000397117 USP17L2Q6R6M4 530 aa15.41■□□□□ 0.06
SEC13-209ENST00000397117 CATIPQ7Z7H3 387 aa15.41■□□□□ 0.06
SEC13-209ENST00000397117 MICU3Q86XE3 530 aa15.41■□□□□ 0.06
SEC13-209ENST00000397117 DGKHQ86XP1 1220 aa15.41■□□□□ 0.06
SEC13-209ENST00000397117 IL17RBQ9NRM6 502 aa15.41■□□□□ 0.06
SEC13-209ENST00000397117 SMC3Q9UQE7 1217 aa15.41■□□□□ 0.06
SEC13-209ENST00000397117 AKR1B1P15121 316 aa15.4■□□□□ 0.06
SEC13-209ENST00000397117 TATDN1Q6P1N9 297 aa15.4■□□□□ 0.06
SEC13-209ENST00000397117 RAB11FIP4Q86YS3 637 aa15.4■□□□□ 0.06
SEC13-209ENST00000397117 PAGR1Q9BTK6 254 aa15.4■□□□□ 0.06
SEC13-209ENST00000397117 KAT14Q9H8E8 782 aa15.4■□□□□ 0.06
SEC13-209ENST00000397117 STX8Q9UNK0 236 aa15.4■□□□□ 0.06
SEC13-209ENST00000397117 PLIN4Q96Q06 1357 aa15.4■□□□□ 0.06
SEC13-209ENST00000397117 CPLX1O14810 134 aa15.39■□□□□ 0.05
SEC13-209ENST00000397117 CNMDO75829 334 aa15.39■□□□□ 0.05
SEC13-209ENST00000397117 MAP2K5Q13163 448 aa15.39■□□□□ 0.05
SEC13-209ENST00000397117 PPP4R3BQ5MIZ7 849 aa15.39■□□□□ 0.05
SEC13-209ENST00000397117 ZNF654Q8IZM8 581 aa15.39■□□□□ 0.05
SEC13-209ENST00000397117 C12orf42Q96LP6 360 aa15.39■□□□□ 0.05
SEC13-209ENST00000397117 APBA2Q99767 749 aa15.39■□□□□ 0.05
SEC13-209ENST00000397117 RABGAP1Q9Y3P9 1069 aa15.39■□□□□ 0.05
SEC13-209ENST00000397117 GOLGA8AA7E2F4 631 aa15.39■□□□□ 0.05
SEC13-209ENST00000397117 CALM1P0DP23 149 aa15.39■□□□□ 0.05
SEC13-209ENST00000397117 CALM2P0DP24 149 aa15.39■□□□□ 0.05
SEC13-209ENST00000397117 CALM3P0DP25 149 aa15.39■□□□□ 0.05
SEC13-209ENST00000397117 RCAN1P53805 252 aa15.39■□□□□ 0.05
SEC13-209ENST00000397117 ST3GAL1Q11201 340 aa15.39■□□□□ 0.05
SEC13-209ENST00000397117 CPLX2Q6PUV4 134 aaKnown RBP15.39■□□□□ 0.05
SEC13-209ENST00000397117 CCAR1Q8IX12 1150 aaKnown RBP15.39■□□□□ 0.05
SEC13-209ENST00000397117 NUP133Q8WUM0 1156 aa15.39■□□□□ 0.05
SEC13-209ENST00000397117 ANKS1AQ92625 1134 aa15.39■□□□□ 0.05
SEC13-209ENST00000397117 CEP95Q96GE4 821 aa15.39■□□□□ 0.05
SEC13-209ENST00000397117 LLPHQ9BRT6 129 aaKnown RBP15.39■□□□□ 0.05
SEC13-209ENST00000397117 MYL10Q9BUA6 226 aa15.39■□□□□ 0.05
SEC13-209ENST00000397117 NCOA5Q9HCD5 579 aaKnown RBP15.39■□□□□ 0.05
SEC13-209ENST00000397117 CCDC196A0A1B0GTZ2 297 aa15.38■□□□□ 0.05
SEC13-209ENST00000397117 DDAH1O94760 285 aa15.38■□□□□ 0.05
SEC13-209ENST00000397117 GH2P01242 217 aa15.38■□□□□ 0.05
SEC13-209ENST00000397117 RXRAP19793 462 aa15.38■□□□□ 0.05
SEC13-209ENST00000397117 ABCB5Q2M3G0 1257 aa15.38■□□□□ 0.05
SEC13-209ENST00000397117 CCDC144CPQ8IYA2 1237 aa15.38■□□□□ 0.05
SEC13-209ENST00000397117 CABP5Q9NP86 173 aa15.38■□□□□ 0.05
SEC13-209ENST00000397117 FLRT1Q9NZU1 646 aa15.38■□□□□ 0.05
SEC13-209ENST00000397117 USP17L15C9J2P7 530 aa15.37■□□□□ 0.05
SEC13-209ENST00000397117 USP17L13C9JLJ4 530 aa15.37■□□□□ 0.05
SEC13-209ENST00000397117 USP17L11C9JVI0 530 aa15.37■□□□□ 0.05
SEC13-209ENST00000397117 USP17L18D6R9N7 530 aa15.37■□□□□ 0.05
SEC13-209ENST00000397117 USP17L22D6RA61 530 aa15.37■□□□□ 0.05
SEC13-209ENST00000397117 USP17L17D6RBQ6 530 aa15.37■□□□□ 0.05
SEC13-209ENST00000397117 USP17L19D6RCP7 530 aa15.37■□□□□ 0.05
SEC13-209ENST00000397117 USP17L20D6RJB6 530 aa15.37■□□□□ 0.05
SEC13-209ENST00000397117 POTEB2H3BUK9 544 aa15.37■□□□□ 0.05
SEC13-209ENST00000397117 CDKL5O76039 1030 aa15.37■□□□□ 0.05
SEC13-209ENST00000397117 TTLL1O95922 423 aa15.37■□□□□ 0.05
SEC13-209ENST00000397117 MDM2Q00987 491 aaPredicted RBP15.37■□□□□ 0.05
SEC13-209ENST00000397117 USP17L24Q0WX57 530 aa15.37■□□□□ 0.05
SEC13-209ENST00000397117 RTN1Q16799 776 aa15.37■□□□□ 0.05
SEC13-209ENST00000397117 RCSD1Q6JBY9 416 aa15.37■□□□□ 0.05
SEC13-209ENST00000397117 CATSPERGQ6ZRH7 1159 aa15.37■□□□□ 0.05
SEC13-209ENST00000397117 TMEM179Q6ZVK1 233 aa15.37■□□□□ 0.05
SEC13-209ENST00000397117 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.37■□□□□ 0.05
SEC13-209ENST00000397117 MTMR4Q9NYA4 1195 aa15.37■□□□□ 0.05
SEC13-209ENST00000397117 CHMP5Q9NZZ3 219 aa15.37■□□□□ 0.05
SEC13-209ENST00000397117 CIZ1Q9ULV3 898 aaPredicted RBP15.37■□□□□ 0.05
SEC13-209ENST00000397117 SLC15A5A6NIM6 579 aa15.36■□□□□ 0.05
SEC13-209ENST00000397117 IGHA2P01877 340 aa15.36■□□□□ 0.05
SEC13-209ENST00000397117 TOP1P11387 765 aaKnown RBP15.36■□□□□ 0.05
SEC13-209ENST00000397117 PTPREP23469 700 aa15.36■□□□□ 0.05
SEC13-209ENST00000397117 GJB2P29033 226 aa15.36■□□□□ 0.05
SEC13-209ENST00000397117 PPP2R5BQ15173 497 aa15.36■□□□□ 0.05
SEC13-209ENST00000397117 FAM109BQ6ICB4 259 aaPredicted RBP15.36■□□□□ 0.05
SEC13-209ENST00000397117 LBX2Q6XYB7 198 aa15.36■□□□□ 0.05
SEC13-209ENST00000397117 FANCBQ8NB91 859 aa15.36■□□□□ 0.05
SEC13-209ENST00000397117 PNMA1Q8ND90 353 aa15.36■□□□□ 0.05
SEC13-209ENST00000397117 TMEM47Q9BQJ4 181 aa15.36■□□□□ 0.05
SEC13-209ENST00000397117 KANSL2Q9H9L4 492 aa15.36■□□□□ 0.05
SEC13-209ENST00000397117 MYH8P13535 1937 aa15.36■□□□□ 0.05
SEC13-209ENST00000397117 IGKV6D-41A0A0C4DH26 115 aa15.35■□□□□ 0.05
SEC13-209ENST00000397117 HOXC6P09630 235 aa15.35■□□□□ 0.05
SEC13-209ENST00000397117 CCNA1P78396 465 aa15.35■□□□□ 0.05
SEC13-209ENST00000397117 HMGN5P82970 282 aaKnown RBP15.35■□□□□ 0.05
SEC13-209ENST00000397117 ATP2B2Q01814 1243 aa15.35■□□□□ 0.05
SEC13-209ENST00000397117 RAB3GAP1Q15042 981 aa15.35■□□□□ 0.05
SEC13-209ENST00000397117 MFSD14CQ5VZR4 134 aa15.35■□□□□ 0.05
SEC13-209ENST00000397117 CTCFLQ8NI51 663 aaPredicted RBP15.35■□□□□ 0.05
SEC13-209ENST00000397117 KIAA1683Q9H0B3 1180 aa15.35■□□□□ 0.05
SEC13-209ENST00000397117 RBM28Q9NW13 759 aaKnown RBP15.35■□□□□ 0.05
SEC13-209ENST00000397117 KIF3AQ9Y496 699 aa15.35■□□□□ 0.05
SEC13-209ENST00000397117 NID2Q14112 1375 aa15.35■□□□□ 0.05
SEC13-209ENST00000397117 PTPDC1A2A3K4 754 aa15.35■□□□□ 0.05
SEC13-209ENST00000397117 ADD1P35611 737 aaKnown RBP15.35■□□□□ 0.05
SEC13-209ENST00000397117 DDIT3P35638 169 aa15.35■□□□□ 0.05
SEC13-209ENST00000397117 TROAPQ12815 778 aa15.35■□□□□ 0.05
SEC13-209ENST00000397117 FAM184AQ8NB25 1140 aa15.35■□□□□ 0.05
SEC13-209ENST00000397117 NSUN7Q8NE18 718 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms