RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 PRPF38AQ8NAV1 312 aaKnown RBP17.97■□□□□ 0.47
SEC13-206ENST00000397102 KIF1BPQ96EK5 621 aa17.97■□□□□ 0.47
SEC13-206ENST00000397102 FGD4Q96M96 766 aa17.97■□□□□ 0.47
SEC13-206ENST00000397102 TSPYL2Q9H2G4 693 aaPredicted RBP17.97■□□□□ 0.47
SEC13-206ENST00000397102 YBX2Q9Y2T7 364 aaKnown RBP17.97■□□□□ 0.47
SEC13-206ENST00000397102 TCF20Q9UGU0 1960 aaKnown RBP17.97■□□□□ 0.47
SEC13-206ENST00000397102 CTAGE5O15320 804 aa17.96■□□□□ 0.47
SEC13-206ENST00000397102 ARMCX2Q7L311 632 aa17.96■□□□□ 0.47
SEC13-206ENST00000397102 CPXCR1Q8N123 301 aa17.96■□□□□ 0.47
SEC13-206ENST00000397102 ANKRD35Q8N283 1001 aa17.96■□□□□ 0.47
SEC13-206ENST00000397102 SLC43A3Q8NBI5 491 aa17.96■□□□□ 0.47
SEC13-206ENST00000397102 NYAP2Q9P242 653 aa17.96■□□□□ 0.47
SEC13-206ENST00000397102 ARPP21Q9UBL0 812 aaPredicted RBP17.96■□□□□ 0.47
SEC13-206ENST00000397102 FBXO40Q9UH90 709 aa17.96■□□□□ 0.47
SEC13-206ENST00000397102 SLC4A4Q9Y6R1 1079 aa17.96■□□□□ 0.47
SEC13-206ENST00000397102 F5H6K3 240 aa17.95■□□□□ 0.46
SEC13-206ENST00000397102 ZBED4O75132 1171 aa17.95■□□□□ 0.46
SEC13-206ENST00000397102 NDUFB10O96000 172 aa17.95■□□□□ 0.46
SEC13-206ENST00000397102 SLC4A3P48751 1232 aa17.95■□□□□ 0.46
SEC13-206ENST00000397102 KLRC3Q07444 240 aa17.95■□□□□ 0.46
SEC13-206ENST00000397102 UBE3CQ15386 1083 aa17.95■□□□□ 0.46
SEC13-206ENST00000397102 CHST13Q8NET6 341 aa17.95■□□□□ 0.46
SEC13-206ENST00000397102 KATNBL1Q9H079 304 aa17.95■□□□□ 0.46
SEC13-206ENST00000397102 HIPK3Q9H422 1215 aa17.95■□□□□ 0.46
SEC13-206ENST00000397102 CTDP1Q9Y5B0 961 aaPredicted RBP17.95■□□□□ 0.46
SEC13-206ENST00000397102 CABYRO75952 493 aa17.94■□□□□ 0.46
SEC13-206ENST00000397102 C1QTNF1Q9BXJ1 281 aa17.94■□□□□ 0.46
SEC13-206ENST00000397102 SEZ6LQ9BYH1 1024 aa17.94■□□□□ 0.46
SEC13-206ENST00000397102 BOLA2Q9H3K6 86 aa17.94■□□□□ 0.46
SEC13-206ENST00000397102 SLC38A10Q9HBR0 1119 aa17.94■□□□□ 0.46
SEC13-206ENST00000397102 RAVER2Q9HCJ3 691 aaKnown RBP17.94■□□□□ 0.46
SEC13-206ENST00000397102 LRRC37A2A6NM11 1700 aa17.94■□□□□ 0.46
SEC13-206ENST00000397102 CHD9Q3L8U1 2897 aa17.94■□□□□ 0.46
SEC13-206ENST00000397102 UMODL1Q5DID0 1318 aa17.94■□□□□ 0.46
SEC13-206ENST00000397102 CCER2I3L3R5 266 aa17.93■□□□□ 0.46
SEC13-206ENST00000397102 BMP1P13497 986 aa17.93■□□□□ 0.46
SEC13-206ENST00000397102 RASA1P20936 1047 aa17.93■□□□□ 0.46
SEC13-206ENST00000397102 OAZ1P54368 228 aa17.93■□□□□ 0.46
SEC13-206ENST00000397102 BEX3Q00994 111 aa17.93■□□□□ 0.46
SEC13-206ENST00000397102 PPP2R2DQ66LE6 453 aa17.93■□□□□ 0.46
SEC13-206ENST00000397102 OTOP2Q7RTS6 562 aa17.93■□□□□ 0.46
SEC13-206ENST00000397102 CCDC144CPQ8IYA2 1237 aa17.93■□□□□ 0.46
SEC13-206ENST00000397102 CHGBP05060 677 aa17.92■□□□□ 0.46
SEC13-206ENST00000397102 ATP5JP18859 108 aa17.92■□□□□ 0.46
SEC13-206ENST00000397102 TNFAIP2Q03169 654 aa17.92■□□□□ 0.46
SEC13-206ENST00000397102 ITGA7Q13683 1181 aa17.92■□□□□ 0.46
SEC13-206ENST00000397102 AAK1Q2M2I8 961 aa17.92■□□□□ 0.46
SEC13-206ENST00000397102 SBK1Q52WX2 424 aa17.92■□□□□ 0.46
SEC13-206ENST00000397102 CXCL17Q6UXB2 119 aa17.92■□□□□ 0.46
SEC13-206ENST00000397102 KIFC2Q96AC6 838 aa17.92■□□□□ 0.46
SEC13-206ENST00000397102 NECAB3Q96P71 396 aaPredicted RBP17.92■□□□□ 0.46
SEC13-206ENST00000397102 HAUS7Q99871 368 aa17.92■□□□□ 0.46
SEC13-206ENST00000397102 PCDHA11Q9Y5I1 949 aa17.92■□□□□ 0.46
SEC13-206ENST00000397102 BDP1A6H8Y1 2624 aa17.92■□□□□ 0.46
SEC13-206ENST00000397102 ASTN1O14525 1302 aa17.92■□□□□ 0.46
SEC13-206ENST00000397102 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.91■□□□□ 0.46
SEC13-206ENST00000397102 RABGGTBP53611 331 aa17.91■□□□□ 0.46
SEC13-206ENST00000397102 CCL23P55773 120 aa17.91■□□□□ 0.46
SEC13-206ENST00000397102 ZSCAN25Q6NSZ9 544 aa17.91■□□□□ 0.46
SEC13-206ENST00000397102 TLK2Q86UE8 772 aa17.91■□□□□ 0.46
SEC13-206ENST00000397102 RPUSD2Q8IZ73 545 aaKnown RBP17.91■□□□□ 0.46
SEC13-206ENST00000397102 MICALL1Q8N3F8 863 aa17.91■□□□□ 0.46
SEC13-206ENST00000397102 NOC4LQ9BVI4 516 aaKnown RBP17.91■□□□□ 0.46
SEC13-206ENST00000397102 PUS7LQ9H0K6 701 aaKnown RBP17.91■□□□□ 0.46
SEC13-206ENST00000397102 MKNK2Q9HBH9 465 aa17.91■□□□□ 0.46
SEC13-206ENST00000397102 CLIP2Q9UDT6 1046 aa17.91■□□□□ 0.46
SEC13-206ENST00000397102 FEM1BQ9UK73 627 aa17.91■□□□□ 0.46
SEC13-206ENST00000397102 GNEQ9Y223 722 aaKnown RBP17.91■□□□□ 0.46
SEC13-206ENST00000397102 SLC4A7Q9Y6M7 1214 aa17.91■□□□□ 0.46
SEC13-206ENST00000397102 CNTN2Q02246 1040 aa17.9■□□□□ 0.46
SEC13-206ENST00000397102 FSCN1Q16658 493 aaKnown RBP17.9■□□□□ 0.46
SEC13-206ENST00000397102 NOL8Q76FK4 1167 aaKnown RBP17.9■□□□□ 0.46
SEC13-206ENST00000397102 FAM133AQ8N9E0 248 aa17.9■□□□□ 0.46
SEC13-206ENST00000397102 WNT8AQ9H1J5 351 aa17.9■□□□□ 0.46
SEC13-206ENST00000397102 SYNPO2Q9UMS6 1093 aa17.9■□□□□ 0.46
SEC13-206ENST00000397102 IGKV6D-41A0A0C4DH26 115 aa17.89■□□□□ 0.45
SEC13-206ENST00000397102 ERC2O15083 957 aa17.89■□□□□ 0.45
SEC13-206ENST00000397102 ZEB2O60315 1214 aa17.89■□□□□ 0.45
SEC13-206ENST00000397102 B4GALT4O60513 344 aa17.89■□□□□ 0.45
SEC13-206ENST00000397102 RAB11FIP3O75154 756 aa17.89■□□□□ 0.45
SEC13-206ENST00000397102 HMMRO75330 724 aa17.89■□□□□ 0.45
SEC13-206ENST00000397102 FDX1P10109 184 aa17.89■□□□□ 0.45
SEC13-206ENST00000397102 HOXD11P31277 338 aaPredicted RBP17.89■□□□□ 0.45
SEC13-206ENST00000397102 TFF2Q03403 129 aa17.89■□□□□ 0.45
SEC13-206ENST00000397102 RPAP2Q8IXW5 612 aaPredicted RBP17.89■□□□□ 0.45
SEC13-206ENST00000397102 MKL1Q969V6 931 aa17.89■□□□□ 0.45
SEC13-206ENST00000397102 AP5M1Q9H0R1 490 aa17.89■□□□□ 0.45
SEC13-206ENST00000397102 BCL11AQ9H165 835 aa17.89■□□□□ 0.45
SEC13-206ENST00000397102 ACAD9Q9H845 621 aa17.89■□□□□ 0.45
SEC13-206ENST00000397102 GRIN2DO15399 1336 aa17.89■□□□□ 0.45
SEC13-206ENST00000397102 ASB14A6NK59 587 aa17.88■□□□□ 0.45
SEC13-206ENST00000397102 ZBBXA8MT70 800 aa17.88■□□□□ 0.45
SEC13-206ENST00000397102 MYOGP15173 224 aa17.88■□□□□ 0.45
SEC13-206ENST00000397102 POU3F3P20264 500 aaPredicted RBP17.88■□□□□ 0.45
SEC13-206ENST00000397102 KCNQ1P51787 676 aa17.88■□□□□ 0.45
SEC13-206ENST00000397102 GIMAP6Q6P9H5 292 aa17.88■□□□□ 0.45
SEC13-206ENST00000397102 STK11IPQ8N1F8 1099 aa17.88■□□□□ 0.45
SEC13-206ENST00000397102 GMCL1P1Q8NEA9 526 aa17.88■□□□□ 0.45
SEC13-206ENST00000397102 STRBPQ96SI9 672 aaKnown RBP17.88■□□□□ 0.45
SEC13-206ENST00000397102 TRPV6Q9H1D0 765 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms