RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 GADL1Q6ZQY3 521 aa12.36□□□□□ -0.43
NUP98-205ENST00000397007 SAMD3Q8N6K7 520 aa12.36□□□□□ -0.43
NUP98-205ENST00000397007 TNFRSF25Q93038 417 aa12.36□□□□□ -0.43
NUP98-205ENST00000397007 KATNBL1Q9H079 304 aa12.36□□□□□ -0.43
NUP98-205ENST00000397007 KLRF2D3W0D1 207 aa12.36□□□□□ -0.43
NUP98-205ENST00000397007 ZBTB43O43298 467 aa12.36□□□□□ -0.43
NUP98-205ENST00000397007 OSBPP22059 807 aa12.36□□□□□ -0.43
NUP98-205ENST00000397007 MKRN3Q13064 507 aaKnown RBP12.36□□□□□ -0.43
NUP98-205ENST00000397007 CATIPQ7Z7H3 387 aa12.36□□□□□ -0.43
NUP98-205ENST00000397007 LIMCH1Q9UPQ0 1083 aa12.36□□□□□ -0.43
NUP98-205ENST00000397007 ARID2Q68CP9 1835 aa12.36□□□□□ -0.43
NUP98-205ENST00000397007 ESYT2A0FGR8 921 aa12.35□□□□□ -0.43
NUP98-205ENST00000397007 TMEM232C9JQI7 657 aa12.35□□□□□ -0.43
NUP98-205ENST00000397007 LACTBP83111 547 aaPredicted RBP12.35□□□□□ -0.43
NUP98-205ENST00000397007 TKFCQ3LXA3 575 aa12.35□□□□□ -0.43
NUP98-205ENST00000397007 LLPHQ9BRT6 129 aaKnown RBP12.35□□□□□ -0.43
NUP98-205ENST00000397007 MOV10L1Q9BXT6 1211 aaKnown RBP12.35□□□□□ -0.43
NUP98-205ENST00000397007 SPATC1LQ9H0A9 340 aa12.35□□□□□ -0.43
NUP98-205ENST00000397007 ZBTB5O15062 677 aa12.35□□□□□ -0.43
NUP98-205ENST00000397007 FOXN1O15353 648 aa12.35□□□□□ -0.43
NUP98-205ENST00000397007 PFKFB3Q16875 520 aaPredicted RBP12.35□□□□□ -0.43
NUP98-205ENST00000397007 SLC12A7Q9Y666 1083 aa12.35□□□□□ -0.43
NUP98-205ENST00000397007 hCG_1984214I3L0E3 225 aa12.35□□□□□ -0.43
NUP98-205ENST00000397007 STXBP3O00186 592 aa12.35□□□□□ -0.43
NUP98-205ENST00000397007 GOLGA8HP0CJ92 632 aa12.35□□□□□ -0.43
NUP98-205ENST00000397007 ADD1P35611 737 aaKnown RBP12.35□□□□□ -0.43
NUP98-205ENST00000397007 NEK4P51957 841 aa12.35□□□□□ -0.43
NUP98-205ENST00000397007 PPP1R18Q6NYC8 613 aa12.35□□□□□ -0.43
NUP98-205ENST00000397007 ZNF713Q8N859 430 aaPredicted RBP12.35□□□□□ -0.43
NUP98-205ENST00000397007 DAGLBQ8NCG7 672 aa12.35□□□□□ -0.43
NUP98-205ENST00000397007 CHURC1Q8WUH1 139 aa12.35□□□□□ -0.43
NUP98-205ENST00000397007 PORCNQ9H237 461 aa12.35□□□□□ -0.43
NUP98-205ENST00000397007 CPVLQ9H3G5 476 aa12.35□□□□□ -0.43
NUP98-205ENST00000397007 EDNRBP24530 442 aa12.34□□□□□ -0.43
NUP98-205ENST00000397007 ZYXQ15942 572 aaKnown RBP12.34□□□□□ -0.43
NUP98-205ENST00000397007 PNMA6FA0A0J9YX94 578 aa12.34□□□□□ -0.43
NUP98-205ENST00000397007 GPR25O00155 361 aa12.34□□□□□ -0.43
NUP98-205ENST00000397007 QRICH1Q2TAL8 776 aa12.34□□□□□ -0.43
NUP98-205ENST00000397007 ZNF792Q3KQV3 632 aa12.34□□□□□ -0.43
NUP98-205ENST00000397007 ZFYVE28Q9HCC9 887 aa12.34□□□□□ -0.43
NUP98-205ENST00000397007 MAP3K20Q9NYL2 800 aaKnown RBP12.34□□□□□ -0.43
NUP98-205ENST00000397007 MCM2P49736 904 aa12.34□□□□□ -0.43
NUP98-205ENST00000397007 TRIM47Q96LD4 638 aa12.34□□□□□ -0.43
NUP98-205ENST00000397007 SH3GLB2Q9NR46 395 aa12.34□□□□□ -0.43
NUP98-205ENST00000397007 SH2B1Q9NRF2 756 aaPredicted RBP12.34□□□□□ -0.43
NUP98-205ENST00000397007 GNRH1P01148 92 aa12.33□□□□□ -0.44
NUP98-205ENST00000397007 SLC16A2P36021 539 aa12.33□□□□□ -0.44
NUP98-205ENST00000397007 NKX3-2P78367 333 aa12.33□□□□□ -0.44
NUP98-205ENST00000397007 IRF5Q13568 498 aa12.33□□□□□ -0.44
NUP98-205ENST00000397007 CDC37Q16543 378 aaPredicted RBP12.33□□□□□ -0.44
NUP98-205ENST00000397007 TMX3Q96JJ7 454 aa12.33□□□□□ -0.44
NUP98-205ENST00000397007 LOC102724159A0A0B4J2E5 919 aa12.33□□□□□ -0.44
NUP98-205ENST00000397007 CCDC69A6NI79 296 aa12.33□□□□□ -0.44
NUP98-205ENST00000397007 MEIS2O14770 477 aa12.33□□□□□ -0.44
NUP98-205ENST00000397007 COPB2P35606 906 aa12.33□□□□□ -0.44
NUP98-205ENST00000397007 GNAQP50148 359 aa12.33□□□□□ -0.44
NUP98-205ENST00000397007 PWP2Q15269 919 aaKnown RBP12.33□□□□□ -0.44
NUP98-205ENST00000397007 RTN1Q16799 776 aa12.33□□□□□ -0.44
NUP98-205ENST00000397007 MUM1L1Q5H9M0 696 aa12.33□□□□□ -0.44
NUP98-205ENST00000397007 MAMDC4Q6UXC1 1216 aa12.33□□□□□ -0.44
NUP98-205ENST00000397007 ZNF467Q7Z7K2 595 aaPredicted RBP12.33□□□□□ -0.44
NUP98-205ENST00000397007 FAM133AQ8N9E0 248 aa12.33□□□□□ -0.44
NUP98-205ENST00000397007 ZSCAN31Q96LW9 406 aaPredicted RBP12.33□□□□□ -0.44
NUP98-205ENST00000397007 BARHL2Q9NY43 387 aa12.33□□□□□ -0.44
NUP98-205ENST00000397007 ERICH2A1L162 156 aa12.33□□□□□ -0.44
NUP98-205ENST00000397007 METAP2P50579 478 aaKnown RBP eCLIP12.33□□□□□ -0.44
NUP98-205ENST00000397007 WWC2Q6AWC2 1192 aa12.33□□□□□ -0.44
NUP98-205ENST00000397007 FEZ1Q99689 392 aa12.33□□□□□ -0.44
NUP98-205ENST00000397007 ARHGAP39Q9C0H5 1083 aa12.33□□□□□ -0.44
NUP98-205ENST00000397007 NCOA5Q9HCD5 579 aaKnown RBP12.33□□□□□ -0.44
NUP98-205ENST00000397007 PNMA2Q9UL42 364 aa12.33□□□□□ -0.44
NUP98-205ENST00000397007 GOLGA8BA8MQT2 603 aa12.32□□□□□ -0.44
NUP98-205ENST00000397007 FLOT1O75955 427 aa12.32□□□□□ -0.44
NUP98-205ENST00000397007 TBC1D8O95759 1140 aa12.32□□□□□ -0.44
NUP98-205ENST00000397007 SLC25A27O95847 323 aa12.32□□□□□ -0.44
NUP98-205ENST00000397007 RXRAP19793 462 aa12.32□□□□□ -0.44
NUP98-205ENST00000397007 TAF1CQ15572 869 aaPredicted RBP12.32□□□□□ -0.44
NUP98-205ENST00000397007 CHST13Q8NET6 341 aa12.32□□□□□ -0.44
NUP98-205ENST00000397007 ZNF296Q8WUU4 475 aaPredicted RBP12.32□□□□□ -0.44
NUP98-205ENST00000397007 INTS4Q96HW7 963 aaKnown RBP12.32□□□□□ -0.44
NUP98-205ENST00000397007 AGBL1Q96MI9 1066 aa12.32□□□□□ -0.44
NUP98-205ENST00000397007 TEX13BQ9BXU2 312 aa12.32□□□□□ -0.44
NUP98-205ENST00000397007 UBA5Q9GZZ9 404 aa12.32□□□□□ -0.44
NUP98-205ENST00000397007 ZMYND12Q9H0C1 365 aa12.32□□□□□ -0.44
NUP98-205ENST00000397007 MROH8Q9H579 483 aa12.32□□□□□ -0.44
NUP98-205ENST00000397007 PRDM10Q9NQV6 1147 aa12.32□□□□□ -0.44
NUP98-205ENST00000397007 DIS3Q9Y2L1 958 aaKnown RBP12.32□□□□□ -0.44
NUP98-205ENST00000397007 ABCB11O95342 1321 aa12.32□□□□□ -0.44
NUP98-205ENST00000397007 KIF5BP33176 963 aa12.32□□□□□ -0.44
NUP98-205ENST00000397007 MAP3K21Q5TCX8 1036 aa12.32□□□□□ -0.44
NUP98-205ENST00000397007 GPRC5AQ8NFJ5 357 aa12.32□□□□□ -0.44
NUP98-205ENST00000397007 PIGSQ96S52 555 aa12.32□□□□□ -0.44
NUP98-205ENST00000397007 TANGO6Q9C0B7 1094 aa12.32□□□□□ -0.44
NUP98-205ENST00000397007 COL20A1Q9P218 1284 aa12.32□□□□□ -0.44
NUP98-205ENST00000397007 PTPREP23469 700 aa12.32□□□□□ -0.44
NUP98-205ENST00000397007 OTUD7BQ6GQQ9 843 aa12.32□□□□□ -0.44
NUP98-205ENST00000397007 PHF20Q9BVI0 1012 aa12.32□□□□□ -0.44
NUP98-205ENST00000397007 TOMM22Q9NS69 142 aa12.32□□□□□ -0.44
NUP98-205ENST00000397007 XRCC5P13010 732 aaKnown RBP12.31□□□□□ -0.44
NUP98-205ENST00000397007 TAL1P17542 331 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms