RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 TCP1P17987 556 aaKnown RBP17.24■□□□□ 0.35
GNE-202ENST00000396594 GIMAP8Q8ND71 665 aaPredicted RBP17.24■□□□□ 0.35
GNE-202ENST00000396594 TBC1D31Q96DN5 1066 aa17.24■□□□□ 0.35
GNE-202ENST00000396594 AP3B2Q13367 1082 aa17.23■□□□□ 0.35
GNE-202ENST00000396594 MTX1Q13505 466 aa17.23■□□□□ 0.35
GNE-202ENST00000396594 ATP2A3Q93084 1043 aa17.23■□□□□ 0.35
GNE-202ENST00000396594 PNMA3Q9UL41 463 aa17.23■□□□□ 0.35
GNE-202ENST00000396594 ALKQ9UM73 1620 aa17.23■□□□□ 0.35
GNE-202ENST00000396594 PPFIA4O75335 1185 aa17.23■□□□□ 0.35
GNE-202ENST00000396594 CIB2O75838 187 aa17.23■□□□□ 0.35
GNE-202ENST00000396594 KRT9P35527 623 aa17.23■□□□□ 0.35
GNE-202ENST00000396594 BRD3Q15059 726 aa17.23■□□□□ 0.35
GNE-202ENST00000396594 PFDN4Q9NQP4 134 aa17.23■□□□□ 0.35
GNE-202ENST00000396594 ERICH4A6NGS2 130 aa17.23■□□□□ 0.35
GNE-202ENST00000396594 GIPC1O14908 333 aa17.23■□□□□ 0.35
GNE-202ENST00000396594 IKBKBO14920 756 aa17.23■□□□□ 0.35
GNE-202ENST00000396594 RPS6KA4O75676 772 aa17.23■□□□□ 0.35
GNE-202ENST00000396594 HSPA6P17066 643 aa17.23■□□□□ 0.35
GNE-202ENST00000396594 LIG4P49917 911 aa17.23■□□□□ 0.35
GNE-202ENST00000396594 ARL6IP4Q66PJ3 421 aaKnown RBP17.23■□□□□ 0.35
GNE-202ENST00000396594 CPLX4Q7Z7G2 160 aa17.23■□□□□ 0.35
GNE-202ENST00000396594 DCAF4Q8WV16 495 aa17.23■□□□□ 0.35
GNE-202ENST00000396594 QTRT2Q9H974 415 aaKnown RBP17.23■□□□□ 0.35
GNE-202ENST00000396594 RNF14Q9UBS8 474 aa17.23■□□□□ 0.35
GNE-202ENST00000396594 SERPINB2P05120 415 aa17.23■□□□□ 0.35
GNE-202ENST00000396594 POLA2Q14181 598 aa17.23■□□□□ 0.35
GNE-202ENST00000396594 KRBA2Q6ZNG9 492 aa17.23■□□□□ 0.35
GNE-202ENST00000396594 LZTFL1Q9NQ48 299 aa17.23■□□□□ 0.35
GNE-202ENST00000396594 KCTD2Q14681 263 aa17.22■□□□□ 0.35
GNE-202ENST00000396594 SYT10Q6XYQ8 523 aa17.22■□□□□ 0.35
GNE-202ENST00000396594 TRMT1LQ7Z2T5 733 aaKnown RBP17.22■□□□□ 0.35
GNE-202ENST00000396594 CLTCL1P53675 1640 aa17.22■□□□□ 0.35
GNE-202ENST00000396594 MIS18BP1Q6P0N0 1132 aa17.22■□□□□ 0.35
GNE-202ENST00000396594 VPS16Q9H269 839 aa17.22■□□□□ 0.35
GNE-202ENST00000396594 GOLGA8QA0A0J9YX86 632 aa17.22■□□□□ 0.35
GNE-202ENST00000396594 GOLGA8OA6NCC3 632 aa17.22■□□□□ 0.35
GNE-202ENST00000396594 GOLGA8NF8WBI6 632 aa17.22■□□□□ 0.35
GNE-202ENST00000396594 PLA2G4DQ86XP0 818 aa17.22■□□□□ 0.35
GNE-202ENST00000396594 ATRIPQ8WXE1 791 aa17.22■□□□□ 0.35
GNE-202ENST00000396594 LSG1Q9H089 658 aaKnown RBP17.22■□□□□ 0.35
GNE-202ENST00000396594 FAM114A2Q9NRY5 505 aa17.22■□□□□ 0.35
GNE-202ENST00000396594 STK36Q9NRP7 1315 aa17.22■□□□□ 0.35
GNE-202ENST00000396594 PRPF3O43395 683 aaKnown RBP17.22■□□□□ 0.35
GNE-202ENST00000396594 LMNB1P20700 586 aa17.22■□□□□ 0.35
GNE-202ENST00000396594 LACTBP83111 547 aaPredicted RBP17.22■□□□□ 0.35
GNE-202ENST00000396594 USPL1Q5W0Q7 1092 aa17.22■□□□□ 0.35
GNE-202ENST00000396594 RCSD1Q6JBY9 416 aa17.22■□□□□ 0.35
GNE-202ENST00000396594 INTS8Q75QN2 995 aaKnown RBP17.22■□□□□ 0.35
GNE-202ENST00000396594 FBXO18Q8NFZ0 1043 aa17.22■□□□□ 0.35
GNE-202ENST00000396594 GLG1Q92896 1179 aa17.22■□□□□ 0.35
GNE-202ENST00000396594 SELENOSQ9BQE4 189 aa17.22■□□□□ 0.35
GNE-202ENST00000396594 FBXO40Q9UH90 709 aa17.22■□□□□ 0.35
GNE-202ENST00000396594 PI4KBQ9UBF8 816 aa17.21■□□□□ 0.35
GNE-202ENST00000396594 CCND2P30279 289 aa17.21■□□□□ 0.35
GNE-202ENST00000396594 PEX26Q7Z412 305 aa17.21■□□□□ 0.35
GNE-202ENST00000396594 DGKHQ86XP1 1220 aa17.21■□□□□ 0.35
GNE-202ENST00000396594 POTEDQ86YR6 584 aa17.21■□□□□ 0.35
GNE-202ENST00000396594 NEK9Q8TD19 979 aa17.21■□□□□ 0.35
GNE-202ENST00000396594 MASTLQ96GX5 879 aa17.21■□□□□ 0.35
GNE-202ENST00000396594 HESX1Q9UBX0 185 aa17.21■□□□□ 0.35
GNE-202ENST00000396594 HYOU1Q9Y4L1 999 aa17.21■□□□□ 0.35
GNE-202ENST00000396594 NLRP10Q86W26 655 aa17.21■□□□□ 0.35
GNE-202ENST00000396594 CACTINQ8WUQ7 758 aaKnown RBP17.21■□□□□ 0.35
GNE-202ENST00000396594 PANK4Q9NVE7 773 aa17.21■□□□□ 0.35
GNE-202ENST00000396594 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.21■□□□□ 0.35
GNE-202ENST00000396594 F8W8V4 182 aa17.21■□□□□ 0.35
GNE-202ENST00000396594 FGAP02671 866 aa17.21■□□□□ 0.35
GNE-202ENST00000396594 PFKFB1P16118 471 aa17.21■□□□□ 0.35
GNE-202ENST00000396594 GJC1P36383 396 aa17.21■□□□□ 0.35
GNE-202ENST00000396594 PPFIBP2Q8ND30 876 aa17.21■□□□□ 0.35
GNE-202ENST00000396594 MORC3Q14149 939 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 ME3Q16798 604 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 NACC1Q96RE7 527 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 PDE6CP51160 858 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 SLC39A14Q15043 492 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 KMT5BQ4FZB7 885 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 FAM178BQ8IXR5 827 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 LMBRD1Q9NUN5 540 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 RAB20Q9NX57 234 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 KCNJ18B7U540 433 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 KCNJ12Q14500 433 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 FAM26FQ5R3K3 315 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 CCHCR1Q8TD31 782 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 NCOA3Q9Y6Q9 1424 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 H7C1W4 665 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 IFNAR1P17181 557 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 PTPREP23469 700 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 GTF2F1P35269 517 aaKnown RBP eCLIP17.2■□□□□ 0.34
GNE-202ENST00000396594 CBX1P83916 185 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 PPP1R21Q6ZMI0 780 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 VPS54Q9P1Q0 977 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 PTPRUQ92729 1446 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 PRDM1O75626 825 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 IREB2P48200 963 aaKnown RBP17.2■□□□□ 0.34
GNE-202ENST00000396594 MAP7D3Q8IWC1 876 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 PPP1R9BQ96SB3 815 aa17.2■□□□□ 0.34
GNE-202ENST00000396594 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.2■□□□□ 0.34
GNE-202ENST00000396594 MFAP3P55082 362 aa17.19■□□□□ 0.34
GNE-202ENST00000396594 KARSQ15046 597 aaKnown RBP17.19■□□□□ 0.34
GNE-202ENST00000396594 NCOA5Q9HCD5 579 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms