RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 HSP90B2PQ58FF3 399 aa14.97□□□□□ -0.01
TRIM40-207ENST00000396581 CCDC148Q8NFR7 591 aa14.97□□□□□ -0.01
TRIM40-207ENST00000396581 OR8K1Q8NGG5 319 aa14.97□□□□□ -0.01
TRIM40-207ENST00000396581 CTCFLQ8NI51 663 aaPredicted RBP14.97□□□□□ -0.01
TRIM40-207ENST00000396581 ZNF507Q8TCN5 953 aa14.97□□□□□ -0.01
TRIM40-207ENST00000396581 NELFBQ8WX92 580 aa14.97□□□□□ -0.01
TRIM40-207ENST00000396581 CHP1Q99653 195 aa14.97□□□□□ -0.01
TRIM40-207ENST00000396581 TRIM34Q9BYJ4 488 aa14.97□□□□□ -0.01
TRIM40-207ENST00000396581 TAB2Q9NYJ8 693 aa14.97□□□□□ -0.01
TRIM40-207ENST00000396581 V9GY48 417 aaPredicted RBP14.97□□□□□ -0.01
TRIM40-207ENST00000396581 MYH2Q9UKX2 1941 aa14.97□□□□□ -0.01
TRIM40-207ENST00000396581 PRDM1O75626 825 aa14.97□□□□□ -0.01
TRIM40-207ENST00000396581 DDAH1O94760 285 aa14.97□□□□□ -0.01
TRIM40-207ENST00000396581 PRPF6O94906 941 aaKnown RBP14.97□□□□□ -0.01
TRIM40-207ENST00000396581 PLEKHA8P1O95397 391 aa14.97□□□□□ -0.01
TRIM40-207ENST00000396581 SYF2O95926 243 aaKnown RBP14.97□□□□□ -0.01
TRIM40-207ENST00000396581 SEMA3FQ13275 785 aa14.97□□□□□ -0.01
TRIM40-207ENST00000396581 IL17AQ16552 155 aa14.97□□□□□ -0.01
TRIM40-207ENST00000396581 CRY2Q49AN0 593 aa14.97□□□□□ -0.01
TRIM40-207ENST00000396581 NOM1Q5C9Z4 860 aaKnown RBP14.97□□□□□ -0.01
TRIM40-207ENST00000396581 NCAPH2Q6IBW4 605 aa14.97□□□□□ -0.01
TRIM40-207ENST00000396581 TMTC3Q6ZXV5 915 aa14.97□□□□□ -0.01
TRIM40-207ENST00000396581 FBXO41Q8TF61 875 aa14.97□□□□□ -0.01
TRIM40-207ENST00000396581 CASZ1Q86V15 1759 aa14.97□□□□□ -0.01
TRIM40-207ENST00000396581 CNTNAP5Q8WYK1 1306 aa14.97□□□□□ -0.01
TRIM40-207ENST00000396581 TRIM66O15016 1216 aa14.96□□□□□ -0.01
TRIM40-207ENST00000396581 MEA1Q16626 185 aa14.96□□□□□ -0.01
TRIM40-207ENST00000396581 ARL6IP4Q66PJ3 421 aaKnown RBP14.96□□□□□ -0.01
TRIM40-207ENST00000396581 CATIPQ7Z7H3 387 aa14.96□□□□□ -0.01
TRIM40-207ENST00000396581 ANKRD2Q9GZV1 360 aa14.96□□□□□ -0.01
TRIM40-207ENST00000396581 BLZF1Q9H2G9 400 aa14.96□□□□□ -0.01
TRIM40-207ENST00000396581 CAPN11Q9UMQ6 739 aa14.96□□□□□ -0.01
TRIM40-207ENST00000396581 TTC26A0AVF1 554 aa14.96□□□□□ -0.02
TRIM40-207ENST00000396581 WTIPA6NIX2 430 aaPredicted RBP14.96□□□□□ -0.02
TRIM40-207ENST00000396581 LGALS16A8MUM7 142 aa14.96□□□□□ -0.02
TRIM40-207ENST00000396581 POLRMTO00411 1230 aaKnown RBP14.96□□□□□ -0.02
TRIM40-207ENST00000396581 RPN1P04843 607 aaKnown RBP14.96□□□□□ -0.02
TRIM40-207ENST00000396581 HERVK_113P62684 666 aa14.96□□□□□ -0.02
TRIM40-207ENST00000396581 MAP9Q49MG5 647 aa14.96□□□□□ -0.02
TRIM40-207ENST00000396581 WDR59Q6PJI9 974 aa14.96□□□□□ -0.02
TRIM40-207ENST00000396581 LRRC31Q6UY01 552 aa14.96□□□□□ -0.02
TRIM40-207ENST00000396581 ADGRA1Q86SQ6 560 aa14.96□□□□□ -0.02
TRIM40-207ENST00000396581 ADSSL1Q8N142 457 aa14.96□□□□□ -0.02
TRIM40-207ENST00000396581 MB21D1Q8N884 522 aa14.96□□□□□ -0.02
TRIM40-207ENST00000396581 MIGA1Q8NAN2 632 aa14.96□□□□□ -0.02
TRIM40-207ENST00000396581 STAMQ92783 540 aa14.96□□□□□ -0.02
TRIM40-207ENST00000396581 PARP1P09874 1014 aaKnown RBP14.95□□□□□ -0.02
TRIM40-207ENST00000396581 PRCPP42785 496 aa14.95□□□□□ -0.02
TRIM40-207ENST00000396581 UBXN1Q04323 297 aa14.95□□□□□ -0.02
TRIM40-207ENST00000396581 DDR1Q08345 913 aa14.95□□□□□ -0.02
TRIM40-207ENST00000396581 GRAPQ13588 217 aa14.95□□□□□ -0.02
TRIM40-207ENST00000396581 IFIT1BQ5T764 474 aaKnown RBP14.95□□□□□ -0.02
TRIM40-207ENST00000396581 NLGN1Q8N2Q7 840 aa14.95□□□□□ -0.02
TRIM40-207ENST00000396581 C4orf32Q8N8J7 132 aa14.95□□□□□ -0.02
TRIM40-207ENST00000396581 FLAD1Q8NFF5 587 aa14.95□□□□□ -0.02
TRIM40-207ENST00000396581 GRAPLQ8TC17 118 aaPredicted RBP14.95□□□□□ -0.02
TRIM40-207ENST00000396581 CCDC102AQ96A19 550 aa14.95□□□□□ -0.02
TRIM40-207ENST00000396581 RIOK1Q9BRS2 568 aaKnown RBP14.95□□□□□ -0.02
TRIM40-207ENST00000396581 EFCC1Q9HA90 598 aa14.95□□□□□ -0.02
TRIM40-207ENST00000396581 MYH13Q9UKX3 1938 aa14.95□□□□□ -0.02
TRIM40-207ENST00000396581 PDS5AQ29RF7 1337 aaKnown RBP14.95□□□□□ -0.02
TRIM40-207ENST00000396581 KLRG2A4D1S0 409 aaPredicted RBP14.94□□□□□ -0.02
TRIM40-207ENST00000396581 COBLO75128 1261 aa14.94□□□□□ -0.02
TRIM40-207ENST00000396581 EEF1GP26641 437 aaKnown RBP14.94□□□□□ -0.02
TRIM40-207ENST00000396581 LONP1P36776 959 aaKnown RBP14.94□□□□□ -0.02
TRIM40-207ENST00000396581 KCNB1Q14721 858 aa14.94□□□□□ -0.02
TRIM40-207ENST00000396581 COL23A1Q86Y22 540 aaPredicted RBP14.94□□□□□ -0.02
TRIM40-207ENST00000396581 C10orf67Q8IYJ2 551 aa14.94□□□□□ -0.02
TRIM40-207ENST00000396581 SDR42E1Q8WUS8 393 aa14.94□□□□□ -0.02
TRIM40-207ENST00000396581 FAM84BQ96KN1 310 aaPredicted RBP14.94□□□□□ -0.02
TRIM40-207ENST00000396581 PURBQ96QR8 312 aaKnown RBP14.94□□□□□ -0.02
TRIM40-207ENST00000396581 BRIP1Q9BX63 1249 aa14.94□□□□□ -0.02
TRIM40-207ENST00000396581 THAP9Q9H5L6 903 aa14.94□□□□□ -0.02
TRIM40-207ENST00000396581 TRIM10Q9UDY6 481 aa14.94□□□□□ -0.02
TRIM40-207ENST00000396581 HPCAL4Q9UM19 191 aa14.94□□□□□ -0.02
TRIM40-207ENST00000396581 GUCA1BQ9UMX6 200 aa14.94□□□□□ -0.02
TRIM40-207ENST00000396581 SAR1BQ9Y6B6 198 aa14.94□□□□□ -0.02
TRIM40-207ENST00000396581 TNRC6CQ9HCJ0 1690 aaKnown RBP14.94□□□□□ -0.02
TRIM40-207ENST00000396581 CYP7A1P22680 504 aa14.94□□□□□ -0.02
TRIM40-207ENST00000396581 CAVIN4Q5BKX8 364 aa14.94□□□□□ -0.02
TRIM40-207ENST00000396581 EHBP1Q8NDI1 1231 aa14.94□□□□□ -0.02
TRIM40-207ENST00000396581 COG1Q8WTW3 980 aa14.94□□□□□ -0.02
TRIM40-207ENST00000396581 MMS19Q96T76 1030 aa14.94□□□□□ -0.02
TRIM40-207ENST00000396581 TTYH3Q9C0H2 523 aa14.94□□□□□ -0.02
TRIM40-207ENST00000396581 FAM204AQ9H8W3 233 aa14.94□□□□□ -0.02
TRIM40-207ENST00000396581 GNL3LQ9NVN8 582 aaKnown RBP14.94□□□□□ -0.02
TRIM40-207ENST00000396581 LRP2BPQ9P2M1 347 aa14.94□□□□□ -0.02
TRIM40-207ENST00000396581 GDAQ9Y2T3 454 aa14.94□□□□□ -0.02
TRIM40-207ENST00000396581 LUC7L2Q9Y383 392 aaKnown RBP14.94□□□□□ -0.02
TRIM40-207ENST00000396581 CACNA1SQ13698 1873 aa14.93□□□□□ -0.02
TRIM40-207ENST00000396581 hCG_1642624A0A1W2PR95 340 aa14.93□□□□□ -0.02
TRIM40-207ENST00000396581 ANO9A1A5B4 782 aa14.93□□□□□ -0.02
TRIM40-207ENST00000396581 MINDY4BA8MYZ0 360 aa14.93□□□□□ -0.02
TRIM40-207ENST00000396581 RNF40O75150 1001 aa14.93□□□□□ -0.02
TRIM40-207ENST00000396581 ATP1A1P05023 1023 aaKnown RBP14.93□□□□□ -0.02
TRIM40-207ENST00000396581 MYL1P05976 194 aa14.93□□□□□ -0.02
TRIM40-207ENST00000396581 GYG1P46976 350 aa14.93□□□□□ -0.02
TRIM40-207ENST00000396581 KRT83P78385 493 aa14.93□□□□□ -0.02
TRIM40-207ENST00000396581 CKAP4Q07065 602 aaKnown RBP14.93□□□□□ -0.02
TRIM40-207ENST00000396581 FBXO33Q7Z6M2 555 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms