RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 BAZ2AQ9UIF9 1905 aaKnown RBP19.33■□□□□ 0.69
DDR1-229ENST00000396342 DNAJC25-GNG10A0A024R161 153 aa19.33■□□□□ 0.68
DDR1-229ENST00000396342 CTDSPL2Q05D32 466 aa19.33■□□□□ 0.68
DDR1-229ENST00000396342 HDAC1Q13547 482 aaPredicted RBP19.33■□□□□ 0.68
DDR1-229ENST00000396342 MCMDC2Q4G0Z9 681 aa19.33■□□□□ 0.68
DDR1-229ENST00000396342 GNASQ5JWF2 1037 aa19.33■□□□□ 0.68
DDR1-229ENST00000396342 Q7L0L9 218 aa19.33■□□□□ 0.68
DDR1-229ENST00000396342 ARMCX2Q7L311 632 aa19.33■□□□□ 0.68
DDR1-229ENST00000396342 TRERF1Q96PN7 1200 aa19.33■□□□□ 0.68
DDR1-229ENST00000396342 CRBNQ96SW2 442 aa19.33■□□□□ 0.68
DDR1-229ENST00000396342 MYH8P13535 1937 aa19.33■□□□□ 0.68
DDR1-229ENST00000396342 SYNRGQ9UMZ2 1314 aa19.32■□□□□ 0.68
DDR1-229ENST00000396342 A0A0G2JMZ2 1700 aa19.32■□□□□ 0.68
DDR1-229ENST00000396342 PLA2G6O60733 806 aa19.32■□□□□ 0.68
DDR1-229ENST00000396342 PDE1AP54750 535 aa19.32■□□□□ 0.68
DDR1-229ENST00000396342 FPGSQ05932 587 aa19.32■□□□□ 0.68
DDR1-229ENST00000396342 KCNA10Q16322 511 aa19.32■□□□□ 0.68
DDR1-229ENST00000396342 CCDC129Q6ZRS4 1044 aa19.32■□□□□ 0.68
DDR1-229ENST00000396342 KCTD1Q719H9 257 aa19.32■□□□□ 0.68
DDR1-229ENST00000396342 DCAF4Q8WV16 495 aa19.32■□□□□ 0.68
DDR1-229ENST00000396342 RILPL2Q969X0 211 aa19.32■□□□□ 0.68
DDR1-229ENST00000396342 CHMP4CQ96CF2 233 aa19.32■□□□□ 0.68
DDR1-229ENST00000396342 TOX2Q96NM4 488 aa19.32■□□□□ 0.68
DDR1-229ENST00000396342 RNF41Q9H4P4 317 aaPredicted RBP19.32■□□□□ 0.68
DDR1-229ENST00000396342 MTMR10Q9NXD2 777 aa19.32■□□□□ 0.68
DDR1-229ENST00000396342 CCPG1Q9ULG6 757 aa19.32■□□□□ 0.68
DDR1-229ENST00000396342 ELP1O95163 1332 aa19.31■□□□□ 0.68
DDR1-229ENST00000396342 SNAI1O95863 264 aaPredicted RBP19.31■□□□□ 0.68
DDR1-229ENST00000396342 PCP11498 1178 aaKnown RBP19.31■□□□□ 0.68
DDR1-229ENST00000396342 ALX1Q15699 326 aa19.31■□□□□ 0.68
DDR1-229ENST00000396342 CCDC144BQ3MJ40 725 aa19.31■□□□□ 0.68
DDR1-229ENST00000396342 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.31■□□□□ 0.68
DDR1-229ENST00000396342 RNPC3Q96LT9 517 aaKnown RBP19.31■□□□□ 0.68
DDR1-229ENST00000396342 ADD3Q9UEY8 706 aaKnown RBP19.31■□□□□ 0.68
DDR1-229ENST00000396342 ANAPC4Q9UJX5 808 aa19.31■□□□□ 0.68
DDR1-229ENST00000396342 A0A0U1RQG5 324 aaPredicted RBP19.3■□□□□ 0.68
DDR1-229ENST00000396342 B4DLN1 442 aa19.3■□□□□ 0.68
DDR1-229ENST00000396342 ORC4O43929 436 aa19.3■□□□□ 0.68
DDR1-229ENST00000396342 TOP1P11387 765 aaKnown RBP19.3■□□□□ 0.68
DDR1-229ENST00000396342 MRPL12P52815 198 aaKnown RBP19.3■□□□□ 0.68
DDR1-229ENST00000396342 TNFAIP2Q03169 654 aa19.3■□□□□ 0.68
DDR1-229ENST00000396342 SHHQ15465 462 aa19.3■□□□□ 0.68
DDR1-229ENST00000396342 NSMFQ6X4W1 530 aa19.3■□□□□ 0.68
DDR1-229ENST00000396342 MFSD6Q6ZSS7 791 aa19.3■□□□□ 0.68
DDR1-229ENST00000396342 CCDC144CPQ8IYA2 1237 aa19.3■□□□□ 0.68
DDR1-229ENST00000396342 KIAA0355O15063 1070 aa19.29■□□□□ 0.68
DDR1-229ENST00000396342 ADAMTS4O75173 837 aa19.29■□□□□ 0.68
DDR1-229ENST00000396342 CABYRO75952 493 aa19.29■□□□□ 0.68
DDR1-229ENST00000396342 CST5P28325 142 aaPredicted RBP19.29■□□□□ 0.68
DDR1-229ENST00000396342 CCDC178Q5BJE1 867 aa19.29■□□□□ 0.68
DDR1-229ENST00000396342 ANKRD33Q7Z3H0 272 aa19.29■□□□□ 0.68
DDR1-229ENST00000396342 LENG1Q96BZ8 264 aaPredicted RBP19.29■□□□□ 0.68
DDR1-229ENST00000396342 AGBL1Q96MI9 1066 aa19.29■□□□□ 0.68
DDR1-229ENST00000396342 SEZ6LQ9BYH1 1024 aa19.29■□□□□ 0.68
DDR1-229ENST00000396342 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.29■□□□□ 0.68
DDR1-229ENST00000396342 MYH7P12883 1935 aa19.29■□□□□ 0.68
DDR1-229ENST00000396342 TRIM43BA6NCK2 446 aa19.28■□□□□ 0.68
DDR1-229ENST00000396342 HIP1O00291 1037 aa19.28■□□□□ 0.68
DDR1-229ENST00000396342 DLL1O00548 723 aa19.28■□□□□ 0.68
DDR1-229ENST00000396342 ASGR1P07306 291 aa19.28■□□□□ 0.68
DDR1-229ENST00000396342 NT5C2P49902 561 aa19.28■□□□□ 0.68
DDR1-229ENST00000396342 GJA9P57773 515 aa19.28■□□□□ 0.68
DDR1-229ENST00000396342 SMAD3P84022 425 aaKnown RBP19.28■□□□□ 0.68
DDR1-229ENST00000396342 BRDTQ58F21 947 aaPredicted RBP19.28■□□□□ 0.68
DDR1-229ENST00000396342 TMEM199Q8N511 208 aa19.28■□□□□ 0.68
DDR1-229ENST00000396342 TRIM43Q96BQ3 446 aaPredicted RBP19.28■□□□□ 0.68
DDR1-229ENST00000396342 FAM161BQ96MY7 647 aa19.28■□□□□ 0.68
DDR1-229ENST00000396342 MTIF3Q9H2K0 278 aaKnown RBP19.28■□□□□ 0.68
DDR1-229ENST00000396342 A1CFQ9NQ94 594 aaKnown RBP19.28■□□□□ 0.68
DDR1-229ENST00000396342 DIAPH3Q9NSV4 1193 aa19.28■□□□□ 0.68
DDR1-229ENST00000396342 PRR12Q9ULL5 1215 aa19.28■□□□□ 0.68
DDR1-229ENST00000396342 ICAM1P05362 532 aa19.27■□□□□ 0.68
DDR1-229ENST00000396342 CNTN2Q02246 1040 aa19.27■□□□□ 0.68
DDR1-229ENST00000396342 PPIGQ13427 754 aaKnown RBP eCLIP19.27■□□□□ 0.682e-6■■■□□ 16.6
DDR1-229ENST00000396342 SH3RF1Q7Z6J0 888 aa19.27■□□□□ 0.68
DDR1-229ENST00000396342 KLHDC9Q8NEP7 349 aa19.27■□□□□ 0.68
DDR1-229ENST00000396342 ESR2Q92731 530 aa19.27■□□□□ 0.68
DDR1-229ENST00000396342 YTHDC1Q96MU7 727 aaKnown RBP19.27■□□□□ 0.68
DDR1-229ENST00000396342 LNPKQ9C0E8 428 aa19.27■□□□□ 0.68
DDR1-229ENST00000396342 ALPK3Q96L96 1907 aa19.26■□□□□ 0.67
DDR1-229ENST00000396342 FGAP02671 866 aa19.26■□□□□ 0.67
DDR1-229ENST00000396342 SYDE2Q5VT97 1194 aa19.26■□□□□ 0.67
DDR1-229ENST00000396342 IQSEC1Q6DN90 963 aa19.26■□□□□ 0.67
DDR1-229ENST00000396342 FAM133AQ8N9E0 248 aa19.26■□□□□ 0.67
DDR1-229ENST00000396342 TTC14Q96N46 770 aa19.26■□□□□ 0.67
DDR1-229ENST00000396342 GPHNQ9NQX3 736 aaPredicted RBP19.26■□□□□ 0.67
DDR1-229ENST00000396342 CCDC171Q6TFL3 1326 aa19.25■□□□□ 0.67
DDR1-229ENST00000396342 PTPDC1A2A3K4 754 aa19.25■□□□□ 0.67
DDR1-229ENST00000396342 ARVCFO00192 962 aa19.25■□□□□ 0.67
DDR1-229ENST00000396342 ZNF213O14771 459 aa19.25■□□□□ 0.67
DDR1-229ENST00000396342 NMT2O60551 498 aa19.25■□□□□ 0.67
DDR1-229ENST00000396342 TIMP1P01033 207 aa19.25■□□□□ 0.67
DDR1-229ENST00000396342 HSPD1P10809 573 aaKnown RBP19.25■□□□□ 0.67
DDR1-229ENST00000396342 C9orf50Q5SZB4 431 aa19.25■□□□□ 0.67
DDR1-229ENST00000396342 VPS53Q5VIR6 699 aa19.25■□□□□ 0.67
DDR1-229ENST00000396342 B4GALNT3Q6L9W6 998 aa19.25■□□□□ 0.67
DDR1-229ENST00000396342 TLK2Q86UE8 772 aa19.25■□□□□ 0.67
DDR1-229ENST00000396342 IQCA1Q86XH1 822 aa19.25■□□□□ 0.67
DDR1-229ENST00000396342 FAM227BQ96M60 508 aa19.25■□□□□ 0.67
DDR1-229ENST00000396342 UPF3AQ9H1J1 476 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms