RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 MOB2Q70IA6 237 aa17.7■□□□□ 0.42
VAMP1-202ENST00000396308 NOSTRINQ8IVI9 506 aa17.7■□□□□ 0.42
VAMP1-202ENST00000396308 PROCA1Q8NCQ7 364 aaPredicted RBP17.7■□□□□ 0.42
VAMP1-202ENST00000396308 OPTNQ96CV9 577 aa17.7■□□□□ 0.42
VAMP1-202ENST00000396308 CLMNQ96JQ2 1002 aa17.7■□□□□ 0.42
VAMP1-202ENST00000396308 EMILIN3Q9NT22 766 aa17.7■□□□□ 0.42
VAMP1-202ENST00000396308 GJB4Q9NTQ9 266 aa17.7■□□□□ 0.42
VAMP1-202ENST00000396308 PABPC4Q13310 644 aaKnown RBP eCLIP17.69■□□□□ 0.42
VAMP1-202ENST00000396308 GADL1Q6ZQY3 521 aa17.69■□□□□ 0.42
VAMP1-202ENST00000396308 BLIDQ8IZY5 108 aa17.69■□□□□ 0.42
VAMP1-202ENST00000396308 DAGLBQ8NCG7 672 aa17.69■□□□□ 0.42
VAMP1-202ENST00000396308 SMC1BQ8NDV3 1235 aa17.69■□□□□ 0.42
VAMP1-202ENST00000396308 PCDHA4Q9UN74 947 aa17.69■□□□□ 0.42
VAMP1-202ENST00000396308 COL11A1P12107 1806 aaPredicted RBP17.68■□□□□ 0.42
VAMP1-202ENST00000396308 SMCO2A6NFE2 343 aa17.68■□□□□ 0.42
VAMP1-202ENST00000396308 USP17L15C9J2P7 530 aa17.68■□□□□ 0.42
VAMP1-202ENST00000396308 USP17L13C9JLJ4 530 aa17.68■□□□□ 0.42
VAMP1-202ENST00000396308 USP17L11C9JVI0 530 aa17.68■□□□□ 0.42
VAMP1-202ENST00000396308 USP17L18D6R9N7 530 aa17.68■□□□□ 0.42
VAMP1-202ENST00000396308 USP17L22D6RA61 530 aa17.68■□□□□ 0.42
VAMP1-202ENST00000396308 USP17L17D6RBQ6 530 aa17.68■□□□□ 0.42
VAMP1-202ENST00000396308 USP17L19D6RCP7 530 aa17.68■□□□□ 0.42
VAMP1-202ENST00000396308 USP17L20D6RJB6 530 aa17.68■□□□□ 0.42
VAMP1-202ENST00000396308 ZBED4O75132 1171 aa17.68■□□□□ 0.42
VAMP1-202ENST00000396308 U2AF2P26368 475 aaKnown RBP eCLIP17.68■□□□□ 0.42
VAMP1-202ENST00000396308 USP17L24Q0WX57 530 aa17.68■□□□□ 0.42
VAMP1-202ENST00000396308 SNAPC2Q13487 334 aa17.68■□□□□ 0.42
VAMP1-202ENST00000396308 FASTKD5Q7L8L6 764 aaKnown RBP17.68■□□□□ 0.42
VAMP1-202ENST00000396308 CUL5Q93034 780 aa17.68■□□□□ 0.42
VAMP1-202ENST00000396308 SCAND2PQ9GZW5 306 aaPredicted RBP17.68■□□□□ 0.42
VAMP1-202ENST00000396308 RANBP17Q9H2T7 1088 aaKnown RBP17.68■□□□□ 0.42
VAMP1-202ENST00000396308 PPP1R9AQ9ULJ8 1098 aa17.68■□□□□ 0.42
VAMP1-202ENST00000396308 PCDHA1Q9Y5I3 950 aa17.68■□□□□ 0.42
VAMP1-202ENST00000396308 MYPNQ86TC9 1320 aa17.68■□□□□ 0.42
VAMP1-202ENST00000396308 A0A0G2JLL6 359 aaPredicted RBP17.67■□□□□ 0.42
VAMP1-202ENST00000396308 CCDC194A0A1B0GVG4 234 aa17.67■□□□□ 0.42
VAMP1-202ENST00000396308 BTBD18B2RXH4 712 aa17.67■□□□□ 0.42
VAMP1-202ENST00000396308 MCM4P33991 863 aa17.67■□□□□ 0.42
VAMP1-202ENST00000396308 MRPL12P52815 198 aaKnown RBP17.67■□□□□ 0.42
VAMP1-202ENST00000396308 DNM1Q05193 864 aaKnown RBP17.67■□□□□ 0.42
VAMP1-202ENST00000396308 MCTP2Q6DN12 878 aa17.67■□□□□ 0.42
VAMP1-202ENST00000396308 PRRT2Q7Z6L0 340 aaPredicted RBP17.67■□□□□ 0.42
VAMP1-202ENST00000396308 TEX2Q8IWB9 1127 aa17.67■□□□□ 0.42
VAMP1-202ENST00000396308 REXO1Q8N1G1 1221 aaKnown RBP17.67■□□□□ 0.42
VAMP1-202ENST00000396308 ZMYND12Q9H0C1 365 aa17.67■□□□□ 0.42
VAMP1-202ENST00000396308 KCNH4Q9UQ05 1017 aa17.67■□□□□ 0.42
VAMP1-202ENST00000396308 ABCB11O95342 1321 aa17.67■□□□□ 0.42
VAMP1-202ENST00000396308 KIF3CO14782 793 aa17.66■□□□□ 0.42
VAMP1-202ENST00000396308 IRF6O14896 467 aa17.66■□□□□ 0.42
VAMP1-202ENST00000396308 FIBPO43427 364 aa17.66■□□□□ 0.42
VAMP1-202ENST00000396308 IRX3P78415 501 aaPredicted RBP17.66■□□□□ 0.42
VAMP1-202ENST00000396308 NFKBIBQ15653 356 aa17.66■□□□□ 0.42
VAMP1-202ENST00000396308 USH1GQ495M9 461 aa17.66■□□□□ 0.42
VAMP1-202ENST00000396308 RILPL1Q5EBL4 403 aa17.66■□□□□ 0.42
VAMP1-202ENST00000396308 MYSM1Q5VVJ2 828 aa17.66■□□□□ 0.42
VAMP1-202ENST00000396308 CCDC174Q6PII3 467 aa17.66■□□□□ 0.42
VAMP1-202ENST00000396308 KRT25Q7Z3Z0 450 aa17.66■□□□□ 0.42
VAMP1-202ENST00000396308 COA7Q96BR5 231 aa17.66■□□□□ 0.42
VAMP1-202ENST00000396308 FBXO28Q9NVF7 368 aa17.66■□□□□ 0.42
VAMP1-202ENST00000396308 A0A0G2JMZ2 1700 aa17.65■□□□□ 0.42
VAMP1-202ENST00000396308 KIF28PB7ZC32 967 aa17.65■□□□□ 0.42
VAMP1-202ENST00000396308 ITGBL1O95965 494 aaPredicted RBP17.65■□□□□ 0.42
VAMP1-202ENST00000396308 COG2Q14746 738 aa17.65■□□□□ 0.42
VAMP1-202ENST00000396308 CNKSR2Q8WXI2 1034 aa17.65■□□□□ 0.42
VAMP1-202ENST00000396308 WNK4Q96J92 1243 aa17.65■□□□□ 0.42
VAMP1-202ENST00000396308 SPATA32Q96LK8 384 aa17.65■□□□□ 0.42
VAMP1-202ENST00000396308 RIC8AQ9NPQ8 531 aa17.65■□□□□ 0.42
VAMP1-202ENST00000396308 HOXC10Q9NYD6 342 aa17.65■□□□□ 0.42
VAMP1-202ENST00000396308 CCPG1Q9ULG6 757 aa17.65■□□□□ 0.42
VAMP1-202ENST00000396308 CEP131Q9UPN4 1083 aa17.65■□□□□ 0.42
VAMP1-202ENST00000396308 CNPY2Q9Y2B0 182 aa17.65■□□□□ 0.42
VAMP1-202ENST00000396308 MRPL11Q9Y3B7 192 aaKnown RBP17.65■□□□□ 0.42
VAMP1-202ENST00000396308 ICAM1P05362 532 aa17.64■□□□□ 0.41
VAMP1-202ENST00000396308 ZBTB48P10074 688 aaPredicted RBP17.64■□□□□ 0.41
VAMP1-202ENST00000396308 CETPP11597 493 aa17.64■□□□□ 0.41
VAMP1-202ENST00000396308 OSBPP22059 807 aa17.64■□□□□ 0.41
VAMP1-202ENST00000396308 GTF2A2P52657 109 aa17.64■□□□□ 0.41
VAMP1-202ENST00000396308 HUNKP57058 714 aa17.64■□□□□ 0.41
VAMP1-202ENST00000396308 SNAP25P60880 206 aa17.64■□□□□ 0.41
VAMP1-202ENST00000396308 FMR1Q06787 632 aaKnown RBP eCLIP17.64■□□□□ 0.41
VAMP1-202ENST00000396308 NR5A1Q13285 461 aa17.64■□□□□ 0.41
VAMP1-202ENST00000396308 DGKZQ13574 1117 aa17.64■□□□□ 0.41
VAMP1-202ENST00000396308 CATSPERGQ6ZRH7 1159 aa17.64■□□□□ 0.41
VAMP1-202ENST00000396308 PSTPIP2Q9H939 334 aa17.64■□□□□ 0.41
VAMP1-202ENST00000396308 PNMA3Q9UL41 463 aa17.64■□□□□ 0.41
VAMP1-202ENST00000396308 AGTPBP1Q9UPW5 1226 aa17.64■□□□□ 0.41
VAMP1-202ENST00000396308 RLFQ13129 1914 aa17.64■□□□□ 0.41
VAMP1-202ENST00000396308 GOLGA6L4A6NEF3 574 aa17.63■□□□□ 0.41
VAMP1-202ENST00000396308 PPP1R11O60927 126 aaPredicted RBP17.63■□□□□ 0.41
VAMP1-202ENST00000396308 BMP15O95972 392 aa17.63■□□□□ 0.41
VAMP1-202ENST00000396308 TRAPPC10P48553 1259 aa17.63■□□□□ 0.41
VAMP1-202ENST00000396308 OAZ1P54368 228 aa17.63■□□□□ 0.41
VAMP1-202ENST00000396308 STK38Q15208 465 aa17.63■□□□□ 0.41
VAMP1-202ENST00000396308 NONOQ15233 471 aaKnown RBP eCLIP17.63■□□□□ 0.41
VAMP1-202ENST00000396308 TYW1BQ6NUM6 668 aa17.63■□□□□ 0.41
VAMP1-202ENST00000396308 FAM173BQ6P4H8 233 aa17.63■□□□□ 0.41
VAMP1-202ENST00000396308 OXER1Q8TDS5 423 aa17.63■□□□□ 0.41
VAMP1-202ENST00000396308 EHMT1Q9H9B1 1298 aa17.63■□□□□ 0.41
VAMP1-202ENST00000396308 SLC38A10Q9HBR0 1119 aa17.63■□□□□ 0.41
VAMP1-202ENST00000396308 YEATS4O95619 227 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms