RNA–Protein interactions for RNA: ENST00000396039.1

PARD6B-202, Transcript of par-6 family cell polarity regulator beta, humanhuman

TSL 1 (best) BASIC

Gene PARD6B, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD6B-202ENST00000396039 ANKRD33Q7Z3H0 272 aa26.2■■□□□ 1.78
PARD6B-202ENST00000396039 TICAM2Q86XR7 235 aa26.2■■□□□ 1.78
PARD6B-202ENST00000396039 KLHDC9Q8NEP7 349 aa26.2■■□□□ 1.78
PARD6B-202ENST00000396039 TRIM43Q96BQ3 446 aaPredicted RBP26.2■■□□□ 1.78
PARD6B-202ENST00000396039 TSPY2A6NKD2 308 aa26.19■■□□□ 1.78
PARD6B-202ENST00000396039 PQBP1O60828 265 aaKnown RBP26.19■■□□□ 1.78
PARD6B-202ENST00000396039 SH3RF1Q7Z6J0 888 aa26.19■■□□□ 1.78
PARD6B-202ENST00000396039 STAG1Q8WVM7 1258 aa26.19■■□□□ 1.78
PARD6B-202ENST00000396039 GLT1D1Q96MS3 346 aa26.19■■□□□ 1.78
PARD6B-202ENST00000396039 ELP1O95163 1332 aa26.18■■□□□ 1.78
PARD6B-202ENST00000396039 ARMCX2Q7L311 632 aa26.18■■□□□ 1.78
PARD6B-202ENST00000396039 LENG1Q96BZ8 264 aaPredicted RBP26.18■■□□□ 1.78
PARD6B-202ENST00000396039 EVI5LQ96CN4 794 aa26.18■■□□□ 1.78
PARD6B-202ENST00000396039 TMEM39AQ9NV64 488 aa26.18■■□□□ 1.78
PARD6B-202ENST00000396039 STX8Q9UNK0 236 aa26.18■■□□□ 1.78
PARD6B-202ENST00000396039 C6orf222P0C671 652 aaPredicted RBP26.17■■□□□ 1.78
PARD6B-202ENST00000396039 KCNA10Q16322 511 aa26.17■■□□□ 1.78
PARD6B-202ENST00000396039 C9orf50Q5SZB4 431 aa26.17■■□□□ 1.78
PARD6B-202ENST00000396039 OTUD7AQ8TE49 926 aaPredicted RBP26.17■■□□□ 1.78
PARD6B-202ENST00000396039 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.17■■□□□ 1.78
PARD6B-202ENST00000396039 CUL9Q8IWT3 2517 aa26.17■■□□□ 1.78
PARD6B-202ENST00000396039 LAMA2P24043 3122 aaKnown RBP26.17■■□□□ 1.78
PARD6B-202ENST00000396039 SALL3Q9BXA9 1300 aa26.16■■□□□ 1.78
PARD6B-202ENST00000396039 ASB14A6NK59 587 aa26.16■■□□□ 1.78
PARD6B-202ENST00000396039 FPGSQ05932 587 aa26.16■■□□□ 1.78
PARD6B-202ENST00000396039 CCDC144BQ3MJ40 725 aa26.16■■□□□ 1.78
PARD6B-202ENST00000396039 CCSAPQ6IQ19 270 aaPredicted RBP26.16■■□□□ 1.78
PARD6B-202ENST00000396039 UPF3AQ9H1J1 476 aaKnown RBP26.16■■□□□ 1.78
PARD6B-202ENST00000396039 HOMER2Q9NSB8 354 aa26.16■■□□□ 1.78
PARD6B-202ENST00000396039 RNF146Q9NTX7 359 aa26.16■■□□□ 1.78
PARD6B-202ENST00000396039 ANAPC4Q9UJX5 808 aa26.16■■□□□ 1.78
PARD6B-202ENST00000396039 TMEM265A0A087WTH1 108 aa26.15■■□□□ 1.78
PARD6B-202ENST00000396039 RRP1P56182 461 aaKnown RBP26.15■■□□□ 1.78
PARD6B-202ENST00000396039 GJA9P57773 515 aa26.15■■□□□ 1.78
PARD6B-202ENST00000396039 RNPC3Q96LT9 517 aaKnown RBP26.15■■□□□ 1.78
PARD6B-202ENST00000396039 GUCD1Q96NT3 240 aa26.15■■□□□ 1.78
PARD6B-202ENST00000396039 HELLSQ9NRZ9 838 aa26.15■■□□□ 1.78
PARD6B-202ENST00000396039 ANKRD45Q5TZF3 282 aa26.14■■□□□ 1.78
PARD6B-202ENST00000396039 RCSD1Q6JBY9 416 aa26.14■■□□□ 1.78
PARD6B-202ENST00000396039 CCDC174Q6PII3 467 aa26.14■■□□□ 1.78
PARD6B-202ENST00000396039 CCDC144CPQ8IYA2 1237 aa26.14■■□□□ 1.78
PARD6B-202ENST00000396039 FAM133AQ8N9E0 248 aa26.14■■□□□ 1.78
PARD6B-202ENST00000396039 FGD4Q96M96 766 aa26.14■■□□□ 1.78
PARD6B-202ENST00000396039 LRRC37A2A6NM11 1700 aa26.14■■□□□ 1.77
PARD6B-202ENST00000396039 A0A0U1RQG5 324 aaPredicted RBP26.13■■□□□ 1.77
PARD6B-202ENST00000396039 MCCP23508 829 aa26.13■■□□□ 1.77
PARD6B-202ENST00000396039 FAAP100Q0VG06 881 aa26.13■■□□□ 1.77
PARD6B-202ENST00000396039 ALX1Q15699 326 aa26.13■■□□□ 1.77
PARD6B-202ENST00000396039 A1CFQ9NQ94 594 aaKnown RBP26.13■■□□□ 1.77
PARD6B-202ENST00000396039 ORC4O43929 436 aa26.12■■□□□ 1.77
PARD6B-202ENST00000396039 RANBP6O60518 1105 aaKnown RBP26.12■■□□□ 1.77
PARD6B-202ENST00000396039 ASGR1P07306 291 aa26.12■■□□□ 1.77
PARD6B-202ENST00000396039 CCDC129Q6ZRS4 1044 aa26.12■■□□□ 1.77
PARD6B-202ENST00000396039 DCAF4Q8WV16 495 aa26.12■■□□□ 1.77
PARD6B-202ENST00000396039 FAM161BQ96MY7 647 aa26.12■■□□□ 1.77
PARD6B-202ENST00000396039 TRERF1Q96PN7 1200 aa26.12■■□□□ 1.77
PARD6B-202ENST00000396039 ZNF536O15090 1300 aa26.12■■□□□ 1.77
PARD6B-202ENST00000396039 TLR3O15455 904 aaKnown RBP26.11■■□□□ 1.77
PARD6B-202ENST00000396039 ITGB8P26012 769 aa26.11■■□□□ 1.77
PARD6B-202ENST00000396039 NKX3-2P78367 333 aa26.11■■□□□ 1.77
PARD6B-202ENST00000396039 CTDSPL2Q05D32 466 aa26.11■■□□□ 1.77
PARD6B-202ENST00000396039 GNASQ5JWF2 1037 aa26.11■■□□□ 1.77
PARD6B-202ENST00000396039 VTI1AQ96AJ9 217 aa26.11■■□□□ 1.77
PARD6B-202ENST00000396039 SEZ6LQ9BYH1 1024 aa26.11■■□□□ 1.77
PARD6B-202ENST00000396039 IL17RBQ9NRM6 502 aa26.11■■□□□ 1.77
PARD6B-202ENST00000396039 ZMYM6O95789 1325 aa26.11■■□□□ 1.77
PARD6B-202ENST00000396039 MYADML2A6NDP7 307 aa26.1■■□□□ 1.77
PARD6B-202ENST00000396039 FOXP2O15409 715 aa26.1■■□□□ 1.77
PARD6B-202ENST00000396039 CABYRO75952 493 aa26.1■■□□□ 1.77
PARD6B-202ENST00000396039 TIMP1P01033 207 aa26.1■■□□□ 1.77
PARD6B-202ENST00000396039 ALAS1P13196 640 aa26.1■■□□□ 1.77
PARD6B-202ENST00000396039 PDE1AP54750 535 aa26.1■■□□□ 1.77
PARD6B-202ENST00000396039 HDAC1Q13547 482 aaPredicted RBP26.1■■□□□ 1.77
PARD6B-202ENST00000396039 AAMPQ13685 434 aa26.1■■□□□ 1.77
PARD6B-202ENST00000396039 KCTD1Q719H9 257 aa26.1■■□□□ 1.77
PARD6B-202ENST00000396039 AGBL1Q96MI9 1066 aa26.1■■□□□ 1.77
PARD6B-202ENST00000396039 KATNBL1Q9H079 304 aa26.1■■□□□ 1.77
PARD6B-202ENST00000396039 TBX21Q9UL17 535 aa26.1■■□□□ 1.77
PARD6B-202ENST00000396039 PNMA2Q9UL42 364 aa26.1■■□□□ 1.77
PARD6B-202ENST00000396039 PRR12Q9ULL5 1215 aa26.1■■□□□ 1.77
PARD6B-202ENST00000396039 ARVCFO00192 962 aa26.09■■□□□ 1.77
PARD6B-202ENST00000396039 FGRP09769 529 aa26.09■■□□□ 1.77
PARD6B-202ENST00000396039 NOVP48745 357 aa26.09■■□□□ 1.77
PARD6B-202ENST00000396039 CDK7P50613 346 aa26.09■■□□□ 1.77
PARD6B-202ENST00000396039 CNTN2Q02246 1040 aa26.09■■□□□ 1.77
PARD6B-202ENST00000396039 TNFAIP2Q03169 654 aa26.09■■□□□ 1.77
PARD6B-202ENST00000396039 PPIGQ13427 754 aaKnown RBP eCLIP26.09■■□□□ 1.774e-8■■□□□ 12
PARD6B-202ENST00000396039 CCDC96Q2M329 555 aa26.09■■□□□ 1.77
PARD6B-202ENST00000396039 SEMA6BQ9H3T3 888 aa26.09■■□□□ 1.77
PARD6B-202ENST00000396039 A0A0C4DFX4 3053 aa26.08■■□□□ 1.77
PARD6B-202ENST00000396039 ZEB2O60315 1214 aa26.08■■□□□ 1.77
PARD6B-202ENST00000396039 PCP11498 1178 aaKnown RBP26.08■■□□□ 1.77
PARD6B-202ENST00000396039 MCMDC2Q4G0Z9 681 aa26.08■■□□□ 1.77
PARD6B-202ENST00000396039 MFSD5Q6N075 450 aa26.08■■□□□ 1.77
PARD6B-202ENST00000396039 NOL8Q76FK4 1167 aaKnown RBP26.08■■□□□ 1.77
PARD6B-202ENST00000396039 TOMM22Q9NS69 142 aa26.08■■□□□ 1.77
PARD6B-202ENST00000396039 CCPG1Q9ULG6 757 aa26.08■■□□□ 1.77
PARD6B-202ENST00000396039 LCTP09848 1927 aa26.08■■□□□ 1.76
PARD6B-202ENST00000396039 LOC102724159A0A0B4J2E5 919 aa26.07■■□□□ 1.76
PARD6B-202ENST00000396039 ADCY6O43306 1168 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms