RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 SH3GL2Q99962 352 aa9.73□□□□□ -0.85
BDNF-204ENST00000395980 EXOC1Q9NV70 894 aa9.73□□□□□ -0.85
BDNF-204ENST00000395980 GNL3LQ9NVN8 582 aaKnown RBP9.73□□□□□ -0.85
BDNF-204ENST00000395980 LRP2BPQ9P2M1 347 aa9.73□□□□□ -0.85
BDNF-204ENST00000395980 ATXN2Q99700 1313 aaKnown RBP9.73□□□□□ -0.85
BDNF-204ENST00000395980 MAGEB6P1A0A0J9YX57 407 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 EPB41P11171 864 aaKnown RBP9.72□□□□□ -0.85
BDNF-204ENST00000395980 CYP7A1P22680 504 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 TNFRSF8P28908 595 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 PDE4CQ08493 712 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 TTI2Q6NXR4 508 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 CADPS2Q86UW7 1296 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 C4orf32Q8N8J7 132 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 GIMAP8Q8ND71 665 aaPredicted RBP9.72□□□□□ -0.85
BDNF-204ENST00000395980 CUEDC2Q9H467 287 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 MINDY4BA8MYZ0 360 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 OPA1O60313 960 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 NLRP5P59047 1200 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 KIF5AQ12840 1032 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 PFKFB3Q16875 520 aaPredicted RBP9.72□□□□□ -0.85
BDNF-204ENST00000395980 PIK3AP1Q6ZUJ8 805 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 MIGA1Q8NAN2 632 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 TRIM47Q96LD4 638 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 SH3GLB2Q9NR46 395 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 BICDL2A1A5D9 508 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 COBLO75128 1261 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 IDEP14735 1019 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 GUCY2CP25092 1073 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 HNRNPH3P31942 346 aaKnown RBP9.72□□□□□ -0.85
BDNF-204ENST00000395980 GTF2A1P52655 376 aaPredicted RBP9.72□□□□□ -0.85
BDNF-204ENST00000395980 SECISBP2LQ93073 1101 aaKnown RBP9.72□□□□□ -0.85
BDNF-204ENST00000395980 ERGIC2Q96RQ1 377 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 CCSER1Q9C0I3 900 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 NHEJ1Q9H9Q4 299 aaPredicted RBP9.72□□□□□ -0.85
BDNF-204ENST00000395980 SNX12Q9UMY4 172 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 NUTM2BA6NNL0 878 aaPredicted RBP9.72□□□□□ -0.85
BDNF-204ENST00000395980 NUTM2EB1AL46 878 aaPredicted RBP9.72□□□□□ -0.85
BDNF-204ENST00000395980 PDE2AO00408 941 aaPredicted RBP9.72□□□□□ -0.85
BDNF-204ENST00000395980 KLRC4O43908 158 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 ORC4O43929 436 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 SRGAP2O75044 1071 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 KCNA4P22459 653 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 MCM7P33993 719 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 ALS2CLQ60I27 953 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 EMBQ6PCB8 327 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 CAPZA3Q96KX2 299 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 RIOK1Q9BRS2 568 aaKnown RBP9.72□□□□□ -0.85
BDNF-204ENST00000395980 LACRTQ9GZZ8 138 aa9.72□□□□□ -0.85
BDNF-204ENST00000395980 RNF216Q9NWF9 866 aaPredicted RBP9.72□□□□□ -0.85
BDNF-204ENST00000395980 TRIM49BA6NDI0 452 aa9.71□□□□□ -0.85
BDNF-204ENST00000395980 EBAG9O00559 213 aa9.71□□□□□ -0.85
BDNF-204ENST00000395980 USO1O60763 962 aaKnown RBP9.71□□□□□ -0.85
BDNF-204ENST00000395980 TACC1O75410 805 aa9.71□□□□□ -0.85
BDNF-204ENST00000395980 CYP19A1P11511 503 aaPredicted RBP9.71□□□□□ -0.85
BDNF-204ENST00000395980 TRIM21P19474 475 aaKnown RBP9.71□□□□□ -0.85
BDNF-204ENST00000395980 NT5C2P49902 561 aa9.71□□□□□ -0.85
BDNF-204ENST00000395980 IRAK1P51617 712 aa9.71□□□□□ -0.85
BDNF-204ENST00000395980 NNTQ13423 1086 aa9.71□□□□□ -0.85
BDNF-204ENST00000395980 MMS22LQ6ZRQ5 1243 aa9.71□□□□□ -0.85
BDNF-204ENST00000395980 CCDC155Q8N6L0 562 aa9.71□□□□□ -0.85
BDNF-204ENST00000395980 TUBGCP2Q9BSJ2 902 aa9.71□□□□□ -0.85
BDNF-204ENST00000395980 KBTBD4Q9NVX7 518 aa9.71□□□□□ -0.85
BDNF-204ENST00000395980 ASAP1Q9ULH1 1129 aa9.71□□□□□ -0.85
BDNF-204ENST00000395980 ZNF804BA4D1E1 1349 aa9.71□□□□□ -0.85
BDNF-204ENST00000395980 LAMB2P55268 1798 aa9.71□□□□□ -0.86
BDNF-204ENST00000395980 LAD1O00515 517 aa9.71□□□□□ -0.86
BDNF-204ENST00000395980 MYBL2P10244 700 aa9.71□□□□□ -0.86
BDNF-204ENST00000395980 TCP1P17987 556 aaKnown RBP9.71□□□□□ -0.86
BDNF-204ENST00000395980 EPHB4P54760 987 aa9.71□□□□□ -0.86
BDNF-204ENST00000395980 SKOR1P84550 965 aa9.71□□□□□ -0.86
BDNF-204ENST00000395980 MAPK8IP2Q13387 824 aaPredicted RBP9.71□□□□□ -0.86
BDNF-204ENST00000395980 COBLL1Q53SF7 1204 aa9.71□□□□□ -0.86
BDNF-204ENST00000395980 NAALADL2Q58DX5 795 aa9.71□□□□□ -0.86
BDNF-204ENST00000395980 POTEDQ86YR6 584 aa9.71□□□□□ -0.86
BDNF-204ENST00000395980 ZSCAN29Q8IWY8 852 aaPredicted RBP9.71□□□□□ -0.86
BDNF-204ENST00000395980 SRBD1Q8N5C6 995 aaKnown RBP9.71□□□□□ -0.86
BDNF-204ENST00000395980 PIGBQ92521 554 aa9.71□□□□□ -0.86
BDNF-204ENST00000395980 CCDC47Q96A33 483 aaKnown RBP9.71□□□□□ -0.86
BDNF-204ENST00000395980 ZFP91Q96JP5 570 aaPredicted RBP9.71□□□□□ -0.86
BDNF-204ENST00000395980 KAT14Q9H8E8 782 aa9.71□□□□□ -0.86
BDNF-204ENST00000395980 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.71□□□□□ -0.86
BDNF-204ENST00000395980 CACNA1SQ13698 1873 aa9.71□□□□□ -0.86
BDNF-204ENST00000395980 CICQ96RK0 1608 aaPredicted RBP9.71□□□□□ -0.86
BDNF-204ENST00000395980 ITGB4P16144 1822 aa9.71□□□□□ -0.86
BDNF-204ENST00000395980 hCG_1642624A0A1W2PR95 340 aa9.71□□□□□ -0.86
BDNF-204ENST00000395980 RCCD1A6NED2 376 aa9.71□□□□□ -0.86
BDNF-204ENST00000395980 EIF3HO15372 352 aaKnown RBP eCLIP9.71□□□□□ -0.86
BDNF-204ENST00000395980 CCNE1P24864 410 aa9.71□□□□□ -0.86
BDNF-204ENST00000395980 BCAMP50895 628 aa9.71□□□□□ -0.86
BDNF-204ENST00000395980 SPA17Q15506 151 aa9.71□□□□□ -0.86
BDNF-204ENST00000395980 CREG2Q8IUH2 290 aa9.71□□□□□ -0.86
BDNF-204ENST00000395980 SDR42E1Q8WUS8 393 aa9.71□□□□□ -0.86
BDNF-204ENST00000395980 CAPS2Q9BXY5 557 aa9.71□□□□□ -0.86
BDNF-204ENST00000395980 SHTN1A0MZ66 631 aa9.7□□□□□ -0.86
BDNF-204ENST00000395980 IL6STP40189 918 aaPredicted RBP9.7□□□□□ -0.86
BDNF-204ENST00000395980 PMS1P54277 932 aaKnown RBP9.7□□□□□ -0.86
BDNF-204ENST00000395980 CAVIN3Q969G5 261 aa9.7□□□□□ -0.86
BDNF-204ENST00000395980 DUSP9Q99956 384 aaKnown RBP9.7□□□□□ -0.86
BDNF-204ENST00000395980 LAMB1P07942 1786 aa9.7□□□□□ -0.86
BDNF-204ENST00000395980 B4DLN1 442 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms