RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 PCDHB6Q9Y5E3 794 aa16.48■□□□□ 0.23
RTFDC1-203ENST00000395881 hCG_1984214I3L0E3 225 aa16.47■□□□□ 0.23
RTFDC1-203ENST00000395881 PICALMQ13492 652 aa16.47■□□□□ 0.23
RTFDC1-203ENST00000395881 CEP57L1Q8IYX8 460 aa16.47■□□□□ 0.23
RTFDC1-203ENST00000395881 STAG2Q8N3U4 1231 aa16.47■□□□□ 0.23
RTFDC1-203ENST00000395881 ZNF713Q8N859 430 aaPredicted RBP16.47■□□□□ 0.23
RTFDC1-203ENST00000395881 CCDC12Q8WUD4 166 aaPredicted RBP16.47■□□□□ 0.23
RTFDC1-203ENST00000395881 HOOK1Q9UJC3 728 aaKnown RBP16.47■□□□□ 0.23
RTFDC1-203ENST00000395881 KCNH3Q9ULD8 1083 aa16.47■□□□□ 0.23
RTFDC1-203ENST00000395881 PCDHA4Q9UN74 947 aa16.47■□□□□ 0.23
RTFDC1-203ENST00000395881 hCG_1642624A0A1W2PR95 340 aa16.47■□□□□ 0.23
RTFDC1-203ENST00000395881 KLRF2D3W0D1 207 aa16.47■□□□□ 0.23
RTFDC1-203ENST00000395881 SNHG28P0DPA3 235 aa16.47■□□□□ 0.23
RTFDC1-203ENST00000395881 NOGQ13253 232 aa16.47■□□□□ 0.23
RTFDC1-203ENST00000395881 ASPRV1Q53RT3 343 aa16.47■□□□□ 0.23
RTFDC1-203ENST00000395881 BLIDQ8IZY5 108 aa16.47■□□□□ 0.23
RTFDC1-203ENST00000395881 CLMNQ96JQ2 1002 aa16.47■□□□□ 0.23
RTFDC1-203ENST00000395881 DNAJC25Q9H1X3 360 aa16.47■□□□□ 0.23
RTFDC1-203ENST00000395881 BARHL2Q9NY43 387 aa16.47■□□□□ 0.23
RTFDC1-203ENST00000395881 TUBE1Q9UJT0 475 aa16.47■□□□□ 0.23
RTFDC1-203ENST00000395881 CYTH3O43739 400 aa16.46■□□□□ 0.23
RTFDC1-203ENST00000395881 SHMT1P34896 483 aa16.46■□□□□ 0.23
RTFDC1-203ENST00000395881 CLCN1P35523 988 aa16.46■□□□□ 0.23
RTFDC1-203ENST00000395881 IQCB1Q15051 598 aa16.46■□□□□ 0.23
RTFDC1-203ENST00000395881 ZRSR1Q15695 479 aaKnown RBP16.46■□□□□ 0.23
RTFDC1-203ENST00000395881 KANK3Q6NY19 840 aa16.46■□□□□ 0.23
RTFDC1-203ENST00000395881 BAZ2BQ9UIF8 2168 aaKnown RBP16.46■□□□□ 0.23
RTFDC1-203ENST00000395881 M0R2N6 131 aa16.45■□□□□ 0.22
RTFDC1-203ENST00000395881 ENTPD3O75355 529 aa16.45■□□□□ 0.22
RTFDC1-203ENST00000395881 TTLL1O95922 423 aa16.45■□□□□ 0.22
RTFDC1-203ENST00000395881 TPM3P06753 285 aa16.45■□□□□ 0.22
RTFDC1-203ENST00000395881 IREB2P48200 963 aaKnown RBP16.45■□□□□ 0.22
RTFDC1-203ENST00000395881 ATP2C1P98194 919 aaPredicted RBP16.45■□□□□ 0.22
RTFDC1-203ENST00000395881 MAP2K1Q02750 393 aaPredicted RBP16.45■□□□□ 0.22
RTFDC1-203ENST00000395881 TTC38Q5R3I4 469 aa16.45■□□□□ 0.22
RTFDC1-203ENST00000395881 SARM1Q6SZW1 724 aa16.45■□□□□ 0.22
RTFDC1-203ENST00000395881 KRBA2Q6ZNG9 492 aa16.45■□□□□ 0.22
RTFDC1-203ENST00000395881 SH3BP5LQ7L8J4 393 aa16.45■□□□□ 0.22
RTFDC1-203ENST00000395881 LUZP1Q86V48 1076 aa16.45■□□□□ 0.22
RTFDC1-203ENST00000395881 METTL16Q86W50 562 aaKnown RBP16.45■□□□□ 0.22
RTFDC1-203ENST00000395881 FOXP4Q8IVH2 680 aaPredicted RBP16.45■□□□□ 0.22
RTFDC1-203ENST00000395881 CCDC34Q96HJ3 373 aa16.45■□□□□ 0.22
RTFDC1-203ENST00000395881 CLIC6Q96NY7 704 aa16.45■□□□□ 0.22
RTFDC1-203ENST00000395881 RIOX1Q9H6W3 641 aa16.45■□□□□ 0.22
RTFDC1-203ENST00000395881 PI4KBQ9UBF8 816 aa16.45■□□□□ 0.22
RTFDC1-203ENST00000395881 ATRNL1Q5VV63 1379 aa16.45■□□□□ 0.22
RTFDC1-203ENST00000395881 SIPA1L1O43166 1804 aa16.45■□□□□ 0.22
RTFDC1-203ENST00000395881 ESYT2A0FGR8 921 aa16.44■□□□□ 0.22
RTFDC1-203ENST00000395881 FOXN1O15353 648 aa16.44■□□□□ 0.22
RTFDC1-203ENST00000395881 AKR1B1P15121 316 aa16.44■□□□□ 0.22
RTFDC1-203ENST00000395881 SLC35G1Q2M3R5 365 aa16.44■□□□□ 0.22
RTFDC1-203ENST00000395881 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.44■□□□□ 0.22
RTFDC1-203ENST00000395881 RRP36Q96EU6 259 aaKnown RBP16.44■□□□□ 0.22
RTFDC1-203ENST00000395881 ZMYND12Q9H0C1 365 aa16.44■□□□□ 0.22
RTFDC1-203ENST00000395881 RRAGDQ9NQL2 400 aaPredicted RBP16.44■□□□□ 0.22
RTFDC1-203ENST00000395881 UNCXA6NJT0 531 aa16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 GOLGA6L19H0YKK7 550 aa16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 STXBP3O00186 592 aa16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 PDHBP11177 359 aa16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 NLRP12P59046 1061 aa16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 EARS2Q5JPH6 523 aaKnown RBP16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 ARL6IP4Q66PJ3 421 aaKnown RBP16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 MIGA2Q7L4E1 593 aa16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 SLC10A4Q96EP9 437 aa16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 PYM1Q9BRP8 204 aaKnown RBP16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 ZKSCAN5Q9Y2L8 839 aa16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 DDTLA6NHG4 134 aaPredicted RBP16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 GNA11P29992 359 aa16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 MAP3K9P80192 1104 aa16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 MKRN3Q13064 507 aaKnown RBP16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 SPRYD7Q5W111 196 aa16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 WWC2Q6AWC2 1192 aa16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 C11orf57Q6ZUT1 292 aaPredicted RBP16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 ANKRD13AQ8IZ07 590 aa16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 CNNM3Q8NE01 707 aa16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.43■□□□□ 0.223e-6■■■□□ 15.4
RTFDC1-203ENST00000395881 HOOK2Q96ED9 719 aa16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 CSRNP1Q96S65 589 aa16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 SEC63Q9UGP8 760 aaKnown RBP16.43■□□□□ 0.22
RTFDC1-203ENST00000395881 FAM205CA6NFA0 338 aa16.42■□□□□ 0.22
RTFDC1-203ENST00000395881 GOLGA6L6A8MZA4 724 aa16.42■□□□□ 0.22
RTFDC1-203ENST00000395881 SLURP2P0DP57 97 aa16.42■□□□□ 0.22
RTFDC1-203ENST00000395881 MSNP26038 577 aaKnown RBP16.42■□□□□ 0.22
RTFDC1-203ENST00000395881 ORC2Q13416 577 aaPredicted RBP16.42■□□□□ 0.22
RTFDC1-203ENST00000395881 GPATCH4Q5T3I0 446 aaKnown RBP16.42■□□□□ 0.22
RTFDC1-203ENST00000395881 TATDN1Q6P1N9 297 aa16.42■□□□□ 0.22
RTFDC1-203ENST00000395881 MKL1Q969V6 931 aa16.42■□□□□ 0.22
RTFDC1-203ENST00000395881 MYH4Q9Y623 1939 aa16.41■□□□□ 0.22
RTFDC1-203ENST00000395881 BECN2A8MW95 431 aa16.41■□□□□ 0.22
RTFDC1-203ENST00000395881 LAD1O00515 517 aa16.41■□□□□ 0.22
RTFDC1-203ENST00000395881 AP5Z1O43299 807 aa16.41■□□□□ 0.22
RTFDC1-203ENST00000395881 PTMAP06454 111 aaKnown RBP16.41■□□□□ 0.22
RTFDC1-203ENST00000395881 CDC25BP30305 580 aa16.41■□□□□ 0.22
RTFDC1-203ENST00000395881 GJA5P36382 358 aa16.41■□□□□ 0.22
RTFDC1-203ENST00000395881 LONRF3Q496Y0 759 aa16.41■□□□□ 0.22
RTFDC1-203ENST00000395881 NT5DC1Q5TFE4 455 aa16.41■□□□□ 0.22
RTFDC1-203ENST00000395881 DCAF15Q66K64 600 aa16.41■□□□□ 0.22
RTFDC1-203ENST00000395881 PPP1R18Q6NYC8 613 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms