RNA–Protein interactions for RNA: ENST00000395856.3

NCOA1-203, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-203ENST00000395856 PIK3CAP42336 1068 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 FBXW4P57775 412 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 TUBB4BP68371 445 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 IGBP1P78318 339 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 RGS9BPQ6ZS82 235 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 DHX32Q7L7V1 743 aaKnown RBP4.39□□□□□ -1.71
NCOA1-203ENST00000395856 TTC30AQ86WT1 665 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 OGFOD1Q8N543 542 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 ATP6V1E2Q96A05 226 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 LRRC59Q96AG4 307 aaKnown RBP4.39□□□□□ -1.71
NCOA1-203ENST00000395856 SUCLA2Q9P2R7 463 aaPredicted RBP4.39□□□□□ -1.71
NCOA1-203ENST00000395856 NFE2L3Q9Y4A8 694 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 CCDC141Q6ZP82 1450 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 GTPBP10A4D1E9 387 aaKnown RBP4.39□□□□□ -1.71
NCOA1-203ENST00000395856 H0Y3Z8 333 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 CAPN9O14815 690 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 DLATP10515 647 aaKnown RBP4.39□□□□□ -1.71
NCOA1-203ENST00000395856 BCRP11274 1271 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 CHMLP26374 656 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 TECP42680 631 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 NOP14P78316 857 aaKnown RBP4.39□□□□□ -1.71
NCOA1-203ENST00000395856 PPP2R5EQ16537 467 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 ANKRD13CQ8N6S4 541 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 ZNF280CQ8ND82 737 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 GOLGA5Q8TBA6 731 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 NR1H4Q96RI1 486 aaPredicted RBP4.39□□□□□ -1.71
NCOA1-203ENST00000395856 QTRT2Q9H974 415 aaKnown RBP4.39□□□□□ -1.71
NCOA1-203ENST00000395856 PARP2Q9UGN5 583 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 NSFL1CQ9UNZ2 370 aaKnown RBP4.39□□□□□ -1.71
NCOA1-203ENST00000395856 ZNF711Q9Y462 761 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 SUPT6HQ7KZ85 1726 aaKnown RBP4.39□□□□□ -1.71
NCOA1-203ENST00000395856 RAPGEF3O95398 923 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 DDIT3P35638 169 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 ATP8B2P98198 1209 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 KRT27Q7Z3Y8 459 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 ZC3H18Q86VM9 953 aaKnown RBP4.39□□□□□ -1.71
NCOA1-203ENST00000395856 MARCH10Q8NA82 808 aaPredicted RBP4.39□□□□□ -1.71
NCOA1-203ENST00000395856 DEPDC1BQ8WUY9 529 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 SMAD5Q99717 465 aaKnown RBP4.39□□□□□ -1.71
NCOA1-203ENST00000395856 POLR3CQ9BUI4 534 aaPredicted RBP4.39□□□□□ -1.71
NCOA1-203ENST00000395856 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.39□□□□□ -1.71
NCOA1-203ENST00000395856 IRS4O14654 1257 aaPredicted RBP4.39□□□□□ -1.71
NCOA1-203ENST00000395856 NBNO60934 754 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 CFBP00751 764 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 GARSP41250 739 aaKnown RBP4.39□□□□□ -1.71
NCOA1-203ENST00000395856 ERFP50548 548 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 ADCY7P51828 1080 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 KCNA1Q09470 495 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 CEP85Q6P2H3 762 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 ELMSAN1Q6PJG2 1045 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 IFNL2Q8IZJ0 200 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 CCDC197Q8NCU1 140 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 GABPB2Q8TAK5 448 aaPredicted RBP4.39□□□□□ -1.71
NCOA1-203ENST00000395856 PPP1R13BQ96KQ4 1090 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 NUP58Q9BVL2 599 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 DNAJC5Q9H3Z4 198 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.39□□□□□ -1.71
NCOA1-203ENST00000395856 RIC8AQ9NPQ8 531 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 TMOD4Q9NZQ9 345 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 SCOCQ9UIL1 159 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 USP21Q9UK80 565 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 RAB23Q9ULC3 237 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 PYCARDQ9ULZ3 195 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 FANCD2Q9BXW9 1451 aa4.39□□□□□ -1.71
NCOA1-203ENST00000395856 K7ENM7 598 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 SUPT3HO75486 399 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 DNAJC8O75937 253 aaPredicted RBP4.38□□□□□ -1.71
NCOA1-203ENST00000395856 CCDC159P0C7I6 412 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 YWHAHQ04917 246 aaPredicted RBP4.38□□□□□ -1.71
NCOA1-203ENST00000395856 DMTNQ08495 405 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 KRT28Q7Z3Y7 464 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 GPBP1Q86WP2 473 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 PRPF38AQ8NAV1 312 aaKnown RBP4.38□□□□□ -1.71
NCOA1-203ENST00000395856 SPON1Q9HCB6 807 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 NRBP1Q9UHY1 535 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 AQRO60306 1485 aaKnown RBP eCLIP4.38□□□□□ -1.718e-7■■■■■ 28.7
NCOA1-203ENST00000395856 NR1I2O75469 434 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 ACTN1P12814 892 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 SSTR3P32745 418 aaPredicted RBP4.38□□□□□ -1.71
NCOA1-203ENST00000395856 HADHAP40939 763 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 PDE6CP51160 858 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 BFSP1Q12934 665 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 HDAC1Q13547 482 aaPredicted RBP4.38□□□□□ -1.71
NCOA1-203ENST00000395856 MESDQ14696 234 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 KIF19Q2TAC6 998 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 HSP90AA5PQ58FG0 334 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 KRT80Q6KB66 452 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 CYP4F22Q6NT55 531 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 CATSPER3Q86XQ3 398 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 TMTC1Q8IUR5 882 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 PLEKHM2Q8IWE5 1019 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 SMC5Q8IY18 1101 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 TSPYL6Q8N831 410 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 GRK7Q8WTQ7 553 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 NCLNQ969V3 563 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 KLHL29Q96CT2 875 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 PPP1R36Q96LQ0 422 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 CLIC6Q96NY7 704 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 TESK2Q96S53 571 aa4.38□□□□□ -1.71
NCOA1-203ENST00000395856 TSC22D3Q99576 134 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms