RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 AGBL1Q96MI9 1066 aa21.35■■□□□ 1.01
CXCL12-204ENST00000395793 HOMER2Q9NSB8 354 aa21.35■■□□□ 1.01
CXCL12-204ENST00000395793 PHF24Q9UPV7 400 aa21.35■■□□□ 1.01
CXCL12-204ENST00000395793 MTMR7Q9Y216 660 aa21.35■■□□□ 1.01
CXCL12-204ENST00000395793 ADCY6O43306 1168 aa21.34■■□□□ 1.01
CXCL12-204ENST00000395793 PLA2G6O60733 806 aa21.34■■□□□ 1.01
CXCL12-204ENST00000395793 ADAMTS4O75173 837 aa21.34■■□□□ 1.01
CXCL12-204ENST00000395793 HAND2P61296 217 aa21.34■■□□□ 1.01
CXCL12-204ENST00000395793 RCSD1Q6JBY9 416 aa21.34■■□□□ 1.01
CXCL12-204ENST00000395793 ZNF467Q7Z7K2 595 aaPredicted RBP21.34■■□□□ 1.01
CXCL12-204ENST00000395793 TICAM2Q86XR7 235 aa21.34■■□□□ 1.01
CXCL12-204ENST00000395793 ANKRD35Q8N283 1001 aa21.34■■□□□ 1.01
CXCL12-204ENST00000395793 OSBPL3Q9H4L5 887 aa21.34■■□□□ 1.01
CXCL12-204ENST00000395793 FBXO40Q9UH90 709 aa21.34■■□□□ 1.01
CXCL12-204ENST00000395793 CNPY2Q9Y2B0 182 aa21.34■■□□□ 1.01
CXCL12-204ENST00000395793 SYNRGQ9UMZ2 1314 aa21.33■■□□□ 1.01
CXCL12-204ENST00000395793 FDX1P10109 184 aa21.33■■□□□ 1.01
CXCL12-204ENST00000395793 SDSP20132 328 aa21.33■■□□□ 1.01
CXCL12-204ENST00000395793 IRX5P78411 483 aaPredicted RBP21.33■■□□□ 1.01
CXCL12-204ENST00000395793 CNTN2Q02246 1040 aa21.33■■□□□ 1.01
CXCL12-204ENST00000395793 IKQ13123 557 aaPredicted RBP21.33■■□□□ 1.01
CXCL12-204ENST00000395793 LRIT3Q3SXY7 679 aa21.33■■□□□ 1.01
CXCL12-204ENST00000395793 RRP12Q5JTH9 1297 aaKnown RBP21.33■■□□□ 1.01
CXCL12-204ENST00000395793 PPP4R3BQ5MIZ7 849 aa21.33■■□□□ 1.01
CXCL12-204ENST00000395793 TBC1D10CQ8IV04 446 aa21.33■■□□□ 1.01
CXCL12-204ENST00000395793 CHURC1Q8WUH1 139 aa21.33■■□□□ 1.01
CXCL12-204ENST00000395793 TOMM22Q9NS69 142 aa21.33■■□□□ 1.01
CXCL12-204ENST00000395793 RNF146Q9NTX7 359 aa21.33■■□□□ 1.01
CXCL12-204ENST00000395793 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.33■■□□□ 1.01
CXCL12-204ENST00000395793 ZHX1Q9UKY1 873 aaPredicted RBP21.33■■□□□ 1.01
CXCL12-204ENST00000395793 PRR12Q9ULL5 1215 aa21.33■■□□□ 1.01
CXCL12-204ENST00000395793 MYADML2A6NDP7 307 aa21.32■■□□□ 1
CXCL12-204ENST00000395793 TTBK2Q6IQ55 1244 aa21.32■■□□□ 1
CXCL12-204ENST00000395793 KATNBL1Q9H079 304 aa21.32■■□□□ 1
CXCL12-204ENST00000395793 ACAD9Q9H845 621 aa21.32■■□□□ 1
CXCL12-204ENST00000395793 A1CFQ9NQ94 594 aaKnown RBP21.32■■□□□ 1
CXCL12-204ENST00000395793 PDLIM7Q9NR12 457 aa21.32■■□□□ 1
CXCL12-204ENST00000395793 CCDC174Q6PII3 467 aa21.31■■□□□ 1
CXCL12-204ENST00000395793 ARMCX2Q7L311 632 aa21.31■■□□□ 1
CXCL12-204ENST00000395793 SH3RF1Q7Z6J0 888 aa21.31■■□□□ 1
CXCL12-204ENST00000395793 RNF180Q86T96 592 aa21.31■■□□□ 1
CXCL12-204ENST00000395793 FAM133AQ8N9E0 248 aa21.31■■□□□ 1
CXCL12-204ENST00000395793 TMEM47Q9BQJ4 181 aa21.31■■□□□ 1
CXCL12-204ENST00000395793 DDX49Q9Y6V7 483 aaKnown RBP21.31■■□□□ 1
CXCL12-204ENST00000395793 ASTN1O14525 1302 aa21.3■■□□□ 1
CXCL12-204ENST00000395793 A0A1W2PQ45 241 aaPredicted RBP21.3■■□□□ 1
CXCL12-204ENST00000395793 A0A1W2PQY0 241 aa21.3■■□□□ 1
CXCL12-204ENST00000395793 SOWAHBA6NEL2 793 aa21.3■■□□□ 1
CXCL12-204ENST00000395793 ACVR2BQ13705 512 aa21.3■■□□□ 1
CXCL12-204ENST00000395793 CCDC96Q2M329 555 aa21.3■■□□□ 1
CXCL12-204ENST00000395793 MUM1L1Q5H9M0 696 aa21.3■■□□□ 1
CXCL12-204ENST00000395793 C1orf53Q5VUE5 145 aa21.3■■□□□ 1
CXCL12-204ENST00000395793 KLHDC9Q8NEP7 349 aa21.3■■□□□ 1
CXCL12-204ENST00000395793 DCAF4Q8WV16 495 aa21.3■■□□□ 1
CXCL12-204ENST00000395793 TCP11L1Q9NUJ3 509 aa21.3■■□□□ 1
CXCL12-204ENST00000395793 FAM184BQ9ULE4 1060 aa21.3■■□□□ 1
CXCL12-204ENST00000395793 NEDD4P46934 1319 aa21.29■■□□□ 1
CXCL12-204ENST00000395793 TOP1P11387 765 aaKnown RBP21.29■■□□□ 1
CXCL12-204ENST00000395793 ALAS1P13196 640 aa21.29■■□□□ 1
CXCL12-204ENST00000395793 SLC16A2P36021 539 aa21.29■■□□□ 1
CXCL12-204ENST00000395793 TLE2Q04725 743 aa21.29■■□□□ 1
CXCL12-204ENST00000395793 CCSAPQ6IQ19 270 aaPredicted RBP21.29■■□□□ 1
CXCL12-204ENST00000395793 CCDC144CPQ8IYA2 1237 aa21.29■■□□□ 1
CXCL12-204ENST00000395793 TRERF1Q96PN7 1200 aa21.29■■□□□ 1
CXCL12-204ENST00000395793 LBHD1Q9BQE6 289 aaPredicted RBP21.29■■□□□ 1
CXCL12-204ENST00000395793 PRDM5Q9NQX1 630 aaPredicted RBP21.29■■□□□ 1
CXCL12-204ENST00000395793 TRIM43BA6NCK2 446 aa21.28■■□□□ 1
CXCL12-204ENST00000395793 POTEB2H3BUK9 544 aa21.28■■□□□ 1
CXCL12-204ENST00000395793 TKFCQ3LXA3 575 aa21.28■■□□□ 1
CXCL12-204ENST00000395793 CCDC144BQ3MJ40 725 aa21.28■■□□□ 1
CXCL12-204ENST00000395793 AKNAD1Q5T1N1 836 aa21.28■■□□□ 1
CXCL12-204ENST00000395793 BTNL9Q6UXG8 535 aa21.28■■□□□ 1
CXCL12-204ENST00000395793 TRIM43Q96BQ3 446 aaPredicted RBP21.28■■□□□ 1
CXCL12-204ENST00000395793 RANBP17Q9H2T7 1088 aaKnown RBP21.28■■□□□ 1
CXCL12-204ENST00000395793 ABHD16BQ9H3Z7 469 aa21.28■■□□□ 1
CXCL12-204ENST00000395793 PRKAG2Q9UGJ0 569 aa21.28■■□□□ 1
CXCL12-204ENST00000395793 FRMPD2Q68DX3 1309 aaPredicted RBP21.28■■□□□ 1
CXCL12-204ENST00000395793 DUSP11O75319 330 aaKnown RBP21.27■■□□□ 1
CXCL12-204ENST00000395793 ITGB8P26012 769 aa21.27■■□□□ 1
CXCL12-204ENST00000395793 ACLYP53396 1101 aa21.27■■□□□ 1
CXCL12-204ENST00000395793 CWC27Q6UX04 472 aaKnown RBP21.27■■□□□ 1
CXCL12-204ENST00000395793 Q7L0L9 218 aa21.27■■□□□ 1
CXCL12-204ENST00000395793 SUPT16HQ9Y5B9 1047 aaKnown RBP21.27■■□□□ 1
CXCL12-204ENST00000395793 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.26■□□□□ 0.99
CXCL12-204ENST00000395793 CTAGE5O15320 804 aa21.26■□□□□ 0.99
CXCL12-204ENST00000395793 PDHBP11177 359 aa21.26■□□□□ 0.99
CXCL12-204ENST00000395793 PDE4AP27815 886 aa21.26■□□□□ 0.99
CXCL12-204ENST00000395793 KCNA10Q16322 511 aa21.26■□□□□ 0.99
CXCL12-204ENST00000395793 SYDE2Q5VT97 1194 aa21.26■□□□□ 0.99
CXCL12-204ENST00000395793 MFSD6Q6ZSS7 791 aa21.26■□□□□ 0.99
CXCL12-204ENST00000395793 BADQ92934 168 aa21.26■□□□□ 0.99
CXCL12-204ENST00000395793 PURBQ96QR8 312 aaKnown RBP21.26■□□□□ 0.99
CXCL12-204ENST00000395793 TSEN34Q9BSV6 310 aaKnown RBP21.26■□□□□ 0.99
CXCL12-204ENST00000395793 UPF3AQ9H1J1 476 aaKnown RBP21.26■□□□□ 0.99
CXCL12-204ENST00000395793 IL25Q9H293 177 aa21.26■□□□□ 0.99
CXCL12-204ENST00000395793 GPCPD1Q9NPB8 672 aa21.26■□□□□ 0.99
CXCL12-204ENST00000395793 CCPG1Q9ULG6 757 aa21.26■□□□□ 0.99
CXCL12-204ENST00000395793 ICAM1P05362 532 aa21.25■□□□□ 0.99
CXCL12-204ENST00000395793 PTGS1P23219 599 aa21.25■□□□□ 0.99
CXCL12-204ENST00000395793 CST5P28325 142 aaPredicted RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 251.3 ms