RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 ARMCX2Q7L311 632 aa25.2■■□□□ 1.62
TRAF4-203ENST00000394925 LRRC47Q8N1G4 583 aaKnown RBP25.2■■□□□ 1.62
TRAF4-203ENST00000394925 CHST13Q8NET6 341 aa25.2■■□□□ 1.62
TRAF4-203ENST00000394925 MKL1Q969V6 931 aa25.2■■□□□ 1.62
TRAF4-203ENST00000394925 ZNF287Q9HBT7 754 aa25.2■■□□□ 1.62
TRAF4-203ENST00000394925 MTMR4Q9NYA4 1195 aa25.2■■□□□ 1.62
TRAF4-203ENST00000394925 FBXO40Q9UH90 709 aa25.2■■□□□ 1.62
TRAF4-203ENST00000394925 GJA9P57773 515 aa25.19■■□□□ 1.62
TRAF4-203ENST00000394925 GNASQ5JWF2 1037 aa25.19■■□□□ 1.62
TRAF4-203ENST00000394925 UPF3AQ9H1J1 476 aaKnown RBP25.19■■□□□ 1.62
TRAF4-203ENST00000394925 HOMER2Q9NSB8 354 aa25.19■■□□□ 1.62
TRAF4-203ENST00000394925 MYO9BQ13459 2157 aa25.19■■□□□ 1.62
TRAF4-203ENST00000394925 M0R2C6 588 aa25.18■■□□□ 1.62
TRAF4-203ENST00000394925 TTLL1O95922 423 aa25.18■■□□□ 1.62
TRAF4-203ENST00000394925 GNAT2P19087 354 aa25.18■■□□□ 1.62
TRAF4-203ENST00000394925 PPIGQ13427 754 aaKnown RBP eCLIP25.18■■□□□ 1.621e-9■■■□□ 14.9
TRAF4-203ENST00000394925 C20orf194Q5TEA3 1177 aa25.18■■□□□ 1.62
TRAF4-203ENST00000394925 CCDC144CPQ8IYA2 1237 aa25.18■■□□□ 1.62
TRAF4-203ENST00000394925 TIFAQ96CG3 184 aa25.18■■□□□ 1.62
TRAF4-203ENST00000394925 GPATCH3Q96I76 525 aa25.18■■□□□ 1.62
TRAF4-203ENST00000394925 ZNF576Q9H609 170 aa25.18■■□□□ 1.62
TRAF4-203ENST00000394925 RCAN3Q9UKA8 241 aa25.18■■□□□ 1.62
TRAF4-203ENST00000394925 ISY1Q9ULR0 285 aaKnown RBP25.18■■□□□ 1.62
TRAF4-203ENST00000394925 A0A0U1RQG5 324 aaPredicted RBP25.17■■□□□ 1.62
TRAF4-203ENST00000394925 ARVCFO00192 962 aa25.17■■□□□ 1.62
TRAF4-203ENST00000394925 ZFYP08048 801 aaPredicted RBP25.17■■□□□ 1.62
TRAF4-203ENST00000394925 OAZ1P54368 228 aa25.17■■□□□ 1.62
TRAF4-203ENST00000394925 CNTN2Q02246 1040 aa25.17■■□□□ 1.62
TRAF4-203ENST00000394925 TMEM240Q5SV17 173 aa25.17■■□□□ 1.62
TRAF4-203ENST00000394925 SLFN13Q68D06 897 aa25.17■■□□□ 1.62
TRAF4-203ENST00000394925 C16orf59Q7L2K0 433 aa25.17■■□□□ 1.62
TRAF4-203ENST00000394925 GMCL1P1Q8NEA9 526 aa25.17■■□□□ 1.62
TRAF4-203ENST00000394925 BMP3P12645 472 aa25.16■■□□□ 1.62
TRAF4-203ENST00000394925 CSF2RAP15509 400 aa25.16■■□□□ 1.62
TRAF4-203ENST00000394925 DIEXFQ68CQ4 756 aaKnown RBP25.16■■□□□ 1.62
TRAF4-203ENST00000394925 CCDC174Q6PII3 467 aa25.16■■□□□ 1.62
TRAF4-203ENST00000394925 CCDC129Q6ZRS4 1044 aa25.16■■□□□ 1.62
TRAF4-203ENST00000394925 IFNL3Q8IZI9 196 aa25.16■■□□□ 1.62
TRAF4-203ENST00000394925 USP38Q8NB14 1042 aa25.16■■□□□ 1.62
TRAF4-203ENST00000394925 PPP1R12CQ9BZL4 782 aa25.16■■□□□ 1.62
TRAF4-203ENST00000394925 SYNPO2Q9UMS6 1093 aa25.16■■□□□ 1.62
TRAF4-203ENST00000394925 GRXCR1A8MXD5 290 aa25.15■■□□□ 1.62
TRAF4-203ENST00000394925 PATL2C9JE40 543 aaKnown RBP25.15■■□□□ 1.62
TRAF4-203ENST00000394925 TMEM232C9JQI7 657 aa25.15■■□□□ 1.62
TRAF4-203ENST00000394925 TSPY3P0CV98 308 aa25.15■■□□□ 1.62
TRAF4-203ENST00000394925 TSPY8P0CW00 308 aa25.15■■□□□ 1.62
TRAF4-203ENST00000394925 BEX3Q00994 111 aa25.15■■□□□ 1.62
TRAF4-203ENST00000394925 FAM126BQ8IXS8 530 aa25.15■■□□□ 1.62
TRAF4-203ENST00000394925 TMEM199Q8N511 208 aa25.15■■□□□ 1.62
TRAF4-203ENST00000394925 NEDD1Q8NHV4 660 aa25.15■■□□□ 1.62
TRAF4-203ENST00000394925 CHMP4CQ96CF2 233 aa25.15■■□□□ 1.62
TRAF4-203ENST00000394925 KATNBL1Q9H079 304 aa25.15■■□□□ 1.62
TRAF4-203ENST00000394925 CTAGE5O15320 804 aa25.14■■□□□ 1.62
TRAF4-203ENST00000394925 TLR3O15455 904 aaKnown RBP25.14■■□□□ 1.62
TRAF4-203ENST00000394925 ACRP10323 421 aa25.14■■□□□ 1.62
TRAF4-203ENST00000394925 PBX2P40425 430 aa25.14■■□□□ 1.62
TRAF4-203ENST00000394925 NOL8Q76FK4 1167 aaKnown RBP25.14■■□□□ 1.62
TRAF4-203ENST00000394925 SYMPKQ92797 1274 aaKnown RBP25.14■■□□□ 1.62
TRAF4-203ENST00000394925 ACAD9Q9H845 621 aa25.14■■□□□ 1.62
TRAF4-203ENST00000394925 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.13■■□□□ 1.61
TRAF4-203ENST00000394925 FDX1P10109 184 aa25.13■■□□□ 1.61
TRAF4-203ENST00000394925 TFAP4Q01664 338 aa25.13■■□□□ 1.61
TRAF4-203ENST00000394925 TNFAIP2Q03169 654 aa25.13■■□□□ 1.61
TRAF4-203ENST00000394925 PDE4BQ07343 736 aa25.13■■□□□ 1.61
TRAF4-203ENST00000394925 IKQ13123 557 aaPredicted RBP25.13■■□□□ 1.61
TRAF4-203ENST00000394925 ZNF365Q70YC5 407 aa25.13■■□□□ 1.61
TRAF4-203ENST00000394925 FAM133AQ8N9E0 248 aa25.13■■□□□ 1.61
TRAF4-203ENST00000394925 AGBL1Q96MI9 1066 aa25.13■■□□□ 1.61
TRAF4-203ENST00000394925 PBX4Q9BYU1 374 aa25.13■■□□□ 1.61
TRAF4-203ENST00000394925 DCTPP1Q9H773 170 aa25.13■■□□□ 1.61
TRAF4-203ENST00000394925 CYP2C18P33260 490 aa25.12■■□□□ 1.61
TRAF4-203ENST00000394925 STAT2P52630 851 aa25.12■■□□□ 1.61
TRAF4-203ENST00000394925 RASIP1Q5U651 963 aa25.12■■□□□ 1.61
TRAF4-203ENST00000394925 SEC62Q99442 399 aaKnown RBP25.12■■□□□ 1.61
TRAF4-203ENST00000394925 NACAP1Q9BZK3 213 aa25.12■■□□□ 1.61
TRAF4-203ENST00000394925 A1CFQ9NQ94 594 aaKnown RBP25.12■■□□□ 1.61
TRAF4-203ENST00000394925 RNF146Q9NTX7 359 aa25.12■■□□□ 1.61
TRAF4-203ENST00000394925 PLIN4Q96Q06 1357 aa25.12■■□□□ 1.61
TRAF4-203ENST00000394925 CHD9Q3L8U1 2897 aa25.12■■□□□ 1.61
TRAF4-203ENST00000394925 LRRFIP1Q32MZ4 808 aaKnown RBP25.11■■□□□ 1.61
TRAF4-203ENST00000394925 PSRC1Q6PGN9 363 aaPredicted RBP25.11■■□□□ 1.61
TRAF4-203ENST00000394925 CXCL17Q6UXB2 119 aa25.11■■□□□ 1.61
TRAF4-203ENST00000394925 CHURC1Q8WUH1 139 aa25.11■■□□□ 1.61
TRAF4-203ENST00000394925 PRDM6Q9NQX0 595 aa25.11■■□□□ 1.61
TRAF4-203ENST00000394925 ASTN1O14525 1302 aa25.11■■□□□ 1.61
TRAF4-203ENST00000394925 SOWAHBA6NEL2 793 aa25.1■■□□□ 1.61
TRAF4-203ENST00000394925 CD4P01730 458 aa25.1■■□□□ 1.61
TRAF4-203ENST00000394925 SLC3A2P08195 630 aaKnown RBP25.1■■□□□ 1.61
TRAF4-203ENST00000394925 MCCP23508 829 aa25.1■■□□□ 1.61
TRAF4-203ENST00000394925 SLC1A4P43007 532 aa25.1■■□□□ 1.61
TRAF4-203ENST00000394925 NKX3-2P78367 333 aa25.1■■□□□ 1.61
TRAF4-203ENST00000394925 FAM160B2Q86V87 743 aa25.1■■□□□ 1.61
TRAF4-203ENST00000394925 STAG1Q8WVM7 1258 aa25.1■■□□□ 1.61
TRAF4-203ENST00000394925 PPM1EQ8WY54 764 aa25.1■■□□□ 1.61
TRAF4-203ENST00000394925 GAS2L1Q99501 681 aaPredicted RBP25.1■■□□□ 1.61
TRAF4-203ENST00000394925 NAPBQ9H115 298 aa25.1■■□□□ 1.61
TRAF4-203ENST00000394925 ZNF536O15090 1300 aa25.1■■□□□ 1.61
TRAF4-203ENST00000394925 ASB14A6NK59 587 aa25.09■■□□□ 1.61
TRAF4-203ENST00000394925 ALAS1P13196 640 aa25.09■■□□□ 1.61
TRAF4-203ENST00000394925 PPARAQ07869 468 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms