RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 PLCG1P19174 1290 aa11.81□□□□□ -0.52
ACTN1-203ENST00000394419 ERVK-24P63145 666 aa11.81□□□□□ -0.52
ACTN1-203ENST00000394419 LEKR1Q6ZMV7 388 aa11.81□□□□□ -0.52
ACTN1-203ENST00000394419 RRP36Q96EU6 259 aaKnown RBP11.81□□□□□ -0.52
ACTN1-203ENST00000394419 CALCOCO1Q9P1Z2 691 aa11.81□□□□□ -0.52
ACTN1-203ENST00000394419 ANAPC4Q9UJX5 808 aa11.81□□□□□ -0.52
ACTN1-203ENST00000394419 ZBTB22O15209 634 aa11.81□□□□□ -0.52
ACTN1-203ENST00000394419 SASH3O75995 380 aa11.81□□□□□ -0.52
ACTN1-203ENST00000394419 LDHCP07864 332 aa11.81□□□□□ -0.52
ACTN1-203ENST00000394419 CYLC1P35663 651 aaPredicted RBP11.81□□□□□ -0.52
ACTN1-203ENST00000394419 FUT2Q10981 343 aa11.81□□□□□ -0.52
ACTN1-203ENST00000394419 LRRC47Q8N1G4 583 aaKnown RBP11.81□□□□□ -0.52
ACTN1-203ENST00000394419 MTA3Q9BTC8 594 aa11.81□□□□□ -0.52
ACTN1-203ENST00000394419 ZNF287Q9HBT7 754 aa11.81□□□□□ -0.52
ACTN1-203ENST00000394419 ABCB6Q9NP58 842 aa11.81□□□□□ -0.52
ACTN1-203ENST00000394419 NDUFA10O95299 355 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 CAPN2P17655 700 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 EPS15P42566 896 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 KLK7P49862 253 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 RCAN1P53805 252 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 NONOQ15233 471 aaKnown RBP eCLIP11.8□□□□□ -0.52
ACTN1-203ENST00000394419 IL17AQ16552 155 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 CCDC181Q5TID7 509 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 CCDC70Q6NSX1 233 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 TYW1BQ6NUM6 668 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 JAKMIP2Q96AA8 810 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 TMEM47Q9BQJ4 181 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 CDCA7Q9BWT1 371 aaPredicted RBP11.8□□□□□ -0.52
ACTN1-203ENST00000394419 NWD2Q9ULI1 1742 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 KRT86O43790 486 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 TBC1D8O95759 1140 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 FCER1AP12319 257 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 TRAPPC10P48553 1259 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 PMS1P54277 932 aaKnown RBP11.8□□□□□ -0.52
ACTN1-203ENST00000394419 TXNRD1Q16881 649 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 HDXQ7Z353 690 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 COA7Q96BR5 231 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 MTRQ99707 1265 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 COL18A1P39060 1754 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 BTDP43251 543 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 KIF5AQ12840 1032 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 NFIXQ14938 502 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 LRRC41Q15345 812 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 CLEC4GQ6UXB4 293 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 FBXO33Q7Z6M2 555 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 WDR66Q8TBY9 1149 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 PIGSQ96S52 555 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 ACBD3Q9H3P7 528 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 AGPAT5Q9NUQ2 364 aa11.8□□□□□ -0.52
ACTN1-203ENST00000394419 AMPD3Q01432 767 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 PPARDQ03181 441 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 SF3B3Q15393 1217 aaKnown RBP11.79□□□□□ -0.52
ACTN1-203ENST00000394419 CDKAL1Q5VV42 579 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 ZNF804AQ7Z570 1209 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 C2CD5Q86YS7 1000 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 CLEC10AQ8IUN9 316 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 ZSCAN29Q8IWY8 852 aaPredicted RBP11.79□□□□□ -0.52
ACTN1-203ENST00000394419 KIFC2Q96AC6 838 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 CCDC51Q96ER9 411 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 RABEP2Q9H5N1 569 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 LRWD1Q9UFC0 647 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 ABCC6O95255 1503 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 MYH2Q9UKX2 1941 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 OR52Z1P0C646 297 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 PCP11498 1178 aaKnown RBP11.79□□□□□ -0.52
ACTN1-203ENST00000394419 GNA11P29992 359 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 HNRNPH2P55795 449 aaKnown RBP11.79□□□□□ -0.52
ACTN1-203ENST00000394419 RNASE9P60153 205 aaKnown RBP11.79□□□□□ -0.52
ACTN1-203ENST00000394419 MB21D1Q8N884 522 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 CNBD1Q8NA66 436 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 NOA1Q8NC60 698 aaKnown RBP11.79□□□□□ -0.52
ACTN1-203ENST00000394419 TBCKQ8TEA7 893 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 CNOT6LQ96LI5 555 aaKnown RBP11.79□□□□□ -0.52
ACTN1-203ENST00000394419 CRACR2AQ9BSW2 395 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 TMEM260Q9NX78 707 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 LMTK3Q96Q04 1460 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 ORC4O43929 436 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 KRT83P78385 493 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 GSTO1P78417 241 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 GRIK5Q16478 980 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 TMEM266Q2M3C6 531 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 PDXDC2PQ6P474 469 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 PNKPQ96T60 521 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.79□□□□□ -0.52
ACTN1-203ENST00000394419 GBP3Q9H0R5 595 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 NLRC4Q9NPP4 1024 aa11.79□□□□□ -0.52
ACTN1-203ENST00000394419 ZNF219Q9P2Y4 722 aaPredicted RBP11.79□□□□□ -0.52
ACTN1-203ENST00000394419 CCDC151A5D8V7 595 aa11.78□□□□□ -0.52
ACTN1-203ENST00000394419 RBM5P52756 815 aaKnown RBP eCLIP11.78□□□□□ -0.52
ACTN1-203ENST00000394419 VSNL1P62760 191 aa11.78□□□□□ -0.52
ACTN1-203ENST00000394419 TRIM14Q14142 442 aa11.78□□□□□ -0.52
ACTN1-203ENST00000394419 CCDC40Q4G0X9 1142 aa11.78□□□□□ -0.52
ACTN1-203ENST00000394419 MFSD14BQ5SR56 506 aa11.78□□□□□ -0.52
ACTN1-203ENST00000394419 SV2BQ7L1I2 683 aa11.78□□□□□ -0.52
ACTN1-203ENST00000394419 KRT26Q7Z3Y9 468 aa11.78□□□□□ -0.52
ACTN1-203ENST00000394419 REXO1Q8N1G1 1221 aaKnown RBP11.78□□□□□ -0.52
ACTN1-203ENST00000394419 IL17RBQ9NRM6 502 aa11.78□□□□□ -0.52
ACTN1-203ENST00000394419 PCDHA6Q9UN73 950 aa11.78□□□□□ -0.52
ACTN1-203ENST00000394419 PCDHA8Q9Y5H6 950 aa11.78□□□□□ -0.52
ACTN1-203ENST00000394419 SAR1BQ9Y6B6 198 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms