RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 NOX5Q96PH1 765 aa18.39■□□□□ 0.54
SCN3B-202ENST00000392770 PI4KBQ9UBF8 816 aa18.39■□□□□ 0.54
SCN3B-202ENST00000392770 hCG_1984214I3L0E3 225 aa18.39■□□□□ 0.53
SCN3B-202ENST00000392770 ZNF713Q8N859 430 aaPredicted RBP18.39■□□□□ 0.53
SCN3B-202ENST00000392770 SMCR8Q8TEV9 937 aaPredicted RBP18.39■□□□□ 0.53
SCN3B-202ENST00000392770 DHX37Q8IY37 1157 aaKnown RBP18.39■□□□□ 0.53
SCN3B-202ENST00000392770 TBCKQ8TEA7 893 aa18.39■□□□□ 0.53
SCN3B-202ENST00000392770 ERO1AQ96HE7 468 aa18.39■□□□□ 0.53
SCN3B-202ENST00000392770 RCOR1Q9UKL0 485 aa18.39■□□□□ 0.53
SCN3B-202ENST00000392770 FOSP01100 380 aaPredicted RBP18.39■□□□□ 0.53
SCN3B-202ENST00000392770 RRAGAQ7L523 313 aa18.39■□□□□ 0.53
SCN3B-202ENST00000392770 TIGD1Q96MW7 591 aa18.39■□□□□ 0.53
SCN3B-202ENST00000392770 RIOK3O14730 519 aaKnown RBP18.39■□□□□ 0.53
SCN3B-202ENST00000392770 CYP2J2P51589 502 aa18.39■□□□□ 0.53
SCN3B-202ENST00000392770 TYW1BQ6NUM6 668 aa18.39■□□□□ 0.53
SCN3B-202ENST00000392770 CCDC84Q86UT8 332 aaPredicted RBP18.39■□□□□ 0.53
SCN3B-202ENST00000392770 IKBKGQ9Y6K9 419 aa18.39■□□□□ 0.53
SCN3B-202ENST00000392770 CEMIPQ8WUJ3 1361 aa18.38■□□□□ 0.53
SCN3B-202ENST00000392770 CA8P35219 290 aa18.38■□□□□ 0.53
SCN3B-202ENST00000392770 GPSM2P81274 684 aa18.38■□□□□ 0.53
SCN3B-202ENST00000392770 PLCB3Q01970 1234 aa18.38■□□□□ 0.53
SCN3B-202ENST00000392770 RDH13Q8NBN7 331 aa18.38■□□□□ 0.53
SCN3B-202ENST00000392770 PCDHB13Q9Y5F0 798 aa18.38■□□□□ 0.53
SCN3B-202ENST00000392770 ABCC12Q96J65 1359 aa18.38■□□□□ 0.53
SCN3B-202ENST00000392770 OPA1O60313 960 aa18.38■□□□□ 0.53
SCN3B-202ENST00000392770 KLHL30Q0D2K2 578 aa18.38■□□□□ 0.53
SCN3B-202ENST00000392770 RNF187Q5TA31 235 aaPredicted RBP18.38■□□□□ 0.53
SCN3B-202ENST00000392770 SPATA1Q5VX52 437 aa18.38■□□□□ 0.53
SCN3B-202ENST00000392770 COBLO75128 1261 aa18.38■□□□□ 0.53
SCN3B-202ENST00000392770 UBXN2AP68543 259 aa18.38■□□□□ 0.53
SCN3B-202ENST00000392770 TRIM28Q13263 835 aaKnown RBP18.38■□□□□ 0.53
SCN3B-202ENST00000392770 DPY19L2Q6NUT2 758 aa18.38■□□□□ 0.53
SCN3B-202ENST00000392770 MICALCLQ6ZW33 695 aa18.38■□□□□ 0.53
SCN3B-202ENST00000392770 SMIM5Q71RC9 77 aa18.38■□□□□ 0.53
SCN3B-202ENST00000392770 RTKN2Q8IZC4 609 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 ATF5Q9Y2D1 282 aaPredicted RBP18.37■□□□□ 0.53
SCN3B-202ENST00000392770 PCDHB6Q9Y5E3 794 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 SULF1Q8IWU6 871 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 ZBTB9Q96C00 473 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 MAGEF1Q9HAY2 307 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 RIPOR2Q9Y4F9 1068 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 MAP2P11137 1827 aaKnown RBP18.37■□□□□ 0.53
SCN3B-202ENST00000392770 USP42Q9H9J4 1324 aaKnown RBP18.37■□□□□ 0.53
SCN3B-202ENST00000392770 DNM2P50570 870 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 PPP1R7Q15435 360 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 BRDTQ58F21 947 aaPredicted RBP18.37■□□□□ 0.53
SCN3B-202ENST00000392770 C11orf57Q6ZUT1 292 aaPredicted RBP18.37■□□□□ 0.53
SCN3B-202ENST00000392770 KRT26Q7Z3Y9 468 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 CCDC114Q96M63 670 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 KIAA1024Q9UPX6 916 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 SCARF1Q14162 830 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 VPS72Q15906 364 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 SYDE2Q5VT97 1194 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 CCDC51Q96ER9 411 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 TTC14Q96N46 770 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 CD209Q9NNX6 404 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 NLRC4Q9NPP4 1024 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 PCDHA5Q9Y5H7 936 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 K7ENM7 598 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 SPOPO43791 374 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 C21orf2O43822 256 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 BMP3P12645 472 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 MB21D2Q8IYB1 491 aaPredicted RBP18.37■□□□□ 0.53
SCN3B-202ENST00000392770 GRAMD1CQ8IYS0 662 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 GINS2Q9Y248 185 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 CD163L1Q9NR16 1453 aa18.37■□□□□ 0.53
SCN3B-202ENST00000392770 STX10O60499 249 aa18.36■□□□□ 0.53
SCN3B-202ENST00000392770 GPR162Q16538 588 aa18.36■□□□□ 0.53
SCN3B-202ENST00000392770 DALRD3Q5D0E6 543 aaKnown RBP18.36■□□□□ 0.53
SCN3B-202ENST00000392770 XKR9Q5GH70 373 aa18.36■□□□□ 0.53
SCN3B-202ENST00000392770 IQCDQ96DY2 449 aa18.36■□□□□ 0.53
SCN3B-202ENST00000392770 MTUS1Q9ULD2 1270 aa18.36■□□□□ 0.53
SCN3B-202ENST00000392770 MROH1Q8NDA8 1641 aa18.36■□□□□ 0.53
SCN3B-202ENST00000392770 BCRP11274 1271 aa18.36■□□□□ 0.53
SCN3B-202ENST00000392770 NCAPG2Q86XI2 1143 aa18.36■□□□□ 0.53
SCN3B-202ENST00000392770 TTLL6Q8N841 843 aa18.36■□□□□ 0.53
SCN3B-202ENST00000392770 MLXIPQ9HAP2 919 aa18.36■□□□□ 0.53
SCN3B-202ENST00000392770 TUBB2AQ13885 445 aa18.36■□□□□ 0.53
SCN3B-202ENST00000392770 TUBB2BQ9BVA1 445 aa18.36■□□□□ 0.53
SCN3B-202ENST00000392770 MAGEA1P43355 309 aa18.36■□□□□ 0.53
SCN3B-202ENST00000392770 CRKP46108 304 aa18.36■□□□□ 0.53
SCN3B-202ENST00000392770 CYP4A11Q02928 519 aa18.36■□□□□ 0.53
SCN3B-202ENST00000392770 ZNF354CQ86Y25 554 aa18.36■□□□□ 0.53
SCN3B-202ENST00000392770 GLG1Q92896 1179 aa18.36■□□□□ 0.53
SCN3B-202ENST00000392770 MRFAP1L1Q96HT8 127 aa18.36■□□□□ 0.53
SCN3B-202ENST00000392770 XRCC5P13010 732 aaKnown RBP18.36■□□□□ 0.53
SCN3B-202ENST00000392770 LRMPQ12912 555 aa18.36■□□□□ 0.53
SCN3B-202ENST00000392770 AK8Q96MA6 479 aa18.36■□□□□ 0.53
SCN3B-202ENST00000392770 A0A1W2PRG0 241 aa18.35■□□□□ 0.53
SCN3B-202ENST00000392770 RNASE9P60153 205 aaKnown RBP18.35■□□□□ 0.53
SCN3B-202ENST00000392770 MIGA2Q7L4E1 593 aa18.35■□□□□ 0.53
SCN3B-202ENST00000392770 ANKRD35Q8N283 1001 aa18.35■□□□□ 0.53
SCN3B-202ENST00000392770 CUEDC2Q9H467 287 aa18.35■□□□□ 0.53
SCN3B-202ENST00000392770 PNMA2Q9UL42 364 aa18.35■□□□□ 0.53
SCN3B-202ENST00000392770 WDR19Q8NEZ3 1342 aa18.35■□□□□ 0.53
SCN3B-202ENST00000392770 STAT2P52630 851 aa18.35■□□□□ 0.53
SCN3B-202ENST00000392770 DPCR1Q3MIW9 517 aa18.35■□□□□ 0.53
SCN3B-202ENST00000392770 LIN9Q5TKA1 542 aa18.35■□□□□ 0.53
SCN3B-202ENST00000392770 CARD6Q9BX69 1037 aa18.35■□□□□ 0.53
SCN3B-202ENST00000392770 UBE2SQ16763 222 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms