RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 ARHGEF10LQ9HCE6 1279 aa24.31■■□□□ 1.48
SPHK1-202ENST00000392496 USP25Q9UHP3 1055 aa24.31■■□□□ 1.48
SPHK1-202ENST00000392496 TUBE1Q9UJT0 475 aa24.31■■□□□ 1.48
SPHK1-202ENST00000392496 ZBTB21Q9ULJ3 1066 aa24.31■■□□□ 1.48
SPHK1-202ENST00000392496 POLR2DO15514 142 aaKnown RBP24.31■■□□□ 1.48
SPHK1-202ENST00000392496 RAD21O60216 631 aa24.31■■□□□ 1.48
SPHK1-202ENST00000392496 GMPSP49915 693 aaPredicted RBP24.31■■□□□ 1.48
SPHK1-202ENST00000392496 TNFAIP1Q13829 316 aa24.31■■□□□ 1.48
SPHK1-202ENST00000392496 LUZP1Q86V48 1076 aa24.31■■□□□ 1.48
SPHK1-202ENST00000392496 LAD1O00515 517 aa24.3■■□□□ 1.48
SPHK1-202ENST00000392496 PPP1R11O60927 126 aaPredicted RBP24.3■■□□□ 1.48
SPHK1-202ENST00000392496 ORC2Q13416 577 aaPredicted RBP24.3■■□□□ 1.48
SPHK1-202ENST00000392496 KANK3Q6NY19 840 aa24.3■■□□□ 1.48
SPHK1-202ENST00000392496 C11orf57Q6ZUT1 292 aaPredicted RBP24.3■■□□□ 1.48
SPHK1-202ENST00000392496 RIC8AQ9NPQ8 531 aa24.3■■□□□ 1.48
SPHK1-202ENST00000392496 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.29■■□□□ 1.48
SPHK1-202ENST00000392496 VWA3AA6NCI4 1184 aa24.29■■□□□ 1.48
SPHK1-202ENST00000392496 NLRP12P59046 1061 aa24.29■■□□□ 1.48
SPHK1-202ENST00000392496 USP49Q70CQ1 688 aa24.29■■□□□ 1.48
SPHK1-202ENST00000392496 CDAN1Q8IWY9 1227 aa24.29■■□□□ 1.48
SPHK1-202ENST00000392496 MICALL2Q8IY33 904 aa24.29■■□□□ 1.48
SPHK1-202ENST00000392496 CEP57L1Q8IYX8 460 aa24.29■■□□□ 1.48
SPHK1-202ENST00000392496 SYMPKQ92797 1274 aaKnown RBP24.29■■□□□ 1.48
SPHK1-202ENST00000392496 NAT10Q9H0A0 1025 aaKnown RBP24.29■■□□□ 1.48
SPHK1-202ENST00000392496 A0A1W2PRG0 241 aa24.29■■□□□ 1.48
SPHK1-202ENST00000392496 BMP3P12645 472 aa24.29■■□□□ 1.48
SPHK1-202ENST00000392496 IQCB1Q15051 598 aa24.29■■□□□ 1.48
SPHK1-202ENST00000392496 SERTAD1Q9UHV2 236 aa24.29■■□□□ 1.48
SPHK1-202ENST00000392496 CNOT7Q9UIV1 285 aaKnown RBP24.29■■□□□ 1.48
SPHK1-202ENST00000392496 TMX2Q9Y320 296 aa24.29■■□□□ 1.48
SPHK1-202ENST00000392496 GJA3Q9Y6H8 435 aa24.29■■□□□ 1.48
SPHK1-202ENST00000392496 LONP1P36776 959 aaKnown RBP24.28■■□□□ 1.48
SPHK1-202ENST00000392496 MDM2Q00987 491 aaPredicted RBP24.28■■□□□ 1.48
SPHK1-202ENST00000392496 RASA3Q14644 834 aa24.28■■□□□ 1.48
SPHK1-202ENST00000392496 QRICH1Q2TAL8 776 aa24.28■■□□□ 1.48
SPHK1-202ENST00000392496 BTNL9Q6UXG8 535 aa24.28■■□□□ 1.48
SPHK1-202ENST00000392496 NEK8Q86SG6 692 aa24.28■■□□□ 1.48
SPHK1-202ENST00000392496 EPSTI1Q96J88 318 aa24.28■■□□□ 1.48
SPHK1-202ENST00000392496 GLT8D2Q9H1C3 349 aa24.28■■□□□ 1.48
SPHK1-202ENST00000392496 BIN2Q9UBW5 565 aaPredicted RBP24.28■■□□□ 1.48
SPHK1-202ENST00000392496 ACTN4O43707 911 aaKnown RBP24.27■■□□□ 1.48
SPHK1-202ENST00000392496 ADCY5O95622 1261 aa24.27■■□□□ 1.48
SPHK1-202ENST00000392496 CAP2P40123 477 aa24.27■■□□□ 1.48
SPHK1-202ENST00000392496 PRPHP41219 470 aa24.27■■□□□ 1.48
SPHK1-202ENST00000392496 IL17AQ16552 155 aa24.27■■□□□ 1.48
SPHK1-202ENST00000392496 HS1BP3Q53T59 392 aa24.27■■□□□ 1.48
SPHK1-202ENST00000392496 JAKMIP3Q5VZ66 844 aa24.27■■□□□ 1.48
SPHK1-202ENST00000392496 CCDC34Q96HJ3 373 aa24.27■■□□□ 1.48
SPHK1-202ENST00000392496 PYM1Q9BRP8 204 aaKnown RBP24.27■■□□□ 1.48
SPHK1-202ENST00000392496 EGFRP00533 1210 aa24.26■■□□□ 1.47
SPHK1-202ENST00000392496 MRPL12P52815 198 aaKnown RBP24.26■■□□□ 1.47
SPHK1-202ENST00000392496 PNOCQ13519 176 aa24.26■■□□□ 1.47
SPHK1-202ENST00000392496 CDC37Q16543 378 aaPredicted RBP24.26■■□□□ 1.47
SPHK1-202ENST00000392496 MIGA2Q7L4E1 593 aa24.26■■□□□ 1.47
SPHK1-202ENST00000392496 CUL5Q93034 780 aa24.26■■□□□ 1.47
SPHK1-202ENST00000392496 BPIFA3Q9BQP9 254 aa24.26■■□□□ 1.47
SPHK1-202ENST00000392496 GOPCQ9HD26 462 aa24.26■■□□□ 1.47
SPHK1-202ENST00000392496 SYDE2Q5VT97 1194 aa24.26■■□□□ 1.47
SPHK1-202ENST00000392496 TBCKQ8TEA7 893 aa24.26■■□□□ 1.47
SPHK1-202ENST00000392496 CLK2P49760 499 aaKnown RBP24.25■■□□□ 1.47
SPHK1-202ENST00000392496 POSTNQ15063 836 aa24.25■■□□□ 1.47
SPHK1-202ENST00000392496 DTHD1Q6ZMT9 781 aa24.25■■□□□ 1.47
SPHK1-202ENST00000392496 PDILTQ8N807 584 aa24.25■■□□□ 1.47
SPHK1-202ENST00000392496 TEPSINQ96N21 525 aa24.25■■□□□ 1.47
SPHK1-202ENST00000392496 NUP88Q99567 741 aaPredicted RBP24.25■■□□□ 1.47
SPHK1-202ENST00000392496 SH2D4AQ9H788 454 aa24.25■■□□□ 1.47
SPHK1-202ENST00000392496 TMEM260Q9NX78 707 aa24.25■■□□□ 1.47
SPHK1-202ENST00000392496 RNF181Q9P0P0 153 aa24.25■■□□□ 1.47
SPHK1-202ENST00000392496 DICER1Q9UPY3 1922 aaKnown RBP24.25■■□□□ 1.47
SPHK1-202ENST00000392496 ZNF541Q9H0D2 1346 aa24.25■■□□□ 1.47
SPHK1-202ENST00000392496 A0A087WWV3 80 aa24.24■■□□□ 1.47
SPHK1-202ENST00000392496 TMEM232C9JQI7 657 aa24.24■■□□□ 1.47
SPHK1-202ENST00000392496 ECE1P42892 770 aa24.24■■□□□ 1.47
SPHK1-202ENST00000392496 LETM2Q2VYF4 491 aa24.24■■□□□ 1.47
SPHK1-202ENST00000392496 SAMD7Q7Z3H4 446 aa24.24■■□□□ 1.47
SPHK1-202ENST00000392496 ACER1Q8TDN7 264 aa24.24■■□□□ 1.47
SPHK1-202ENST00000392496 TMEM60Q9H2L4 133 aa24.24■■□□□ 1.47
SPHK1-202ENST00000392496 A0A087X0B3 334 aa24.24■■□□□ 1.47
SPHK1-202ENST00000392496 GOLGA6L19H0YKK7 550 aa24.24■■□□□ 1.47
SPHK1-202ENST00000392496 AP5Z1O43299 807 aa24.24■■□□□ 1.47
SPHK1-202ENST00000392496 ASNSP08243 561 aa24.24■■□□□ 1.47
SPHK1-202ENST00000392496 SLFN14P0C7P3 912 aa24.24■■□□□ 1.47
SPHK1-202ENST00000392496 KIF4BQ2VIQ3 1234 aa24.24■■□□□ 1.47
SPHK1-202ENST00000392496 DPCR1Q3MIW9 517 aa24.24■■□□□ 1.47
SPHK1-202ENST00000392496 DHX58Q96C10 678 aa24.24■■□□□ 1.47
SPHK1-202ENST00000392496 PSTPIP2Q9H939 334 aa24.24■■□□□ 1.47
SPHK1-202ENST00000392496 PCDHA5Q9Y5H7 936 aa24.24■■□□□ 1.47
SPHK1-202ENST00000392496 UTRNP46939 3433 aa24.23■■□□□ 1.47
SPHK1-202ENST00000392496 BIN1O00499 593 aa24.23■■□□□ 1.47
SPHK1-202ENST00000392496 CCNT1O60563 726 aaKnown RBP24.23■■□□□ 1.47
SPHK1-202ENST00000392496 TBC1D10BQ4KMP7 808 aaPredicted RBP24.23■■□□□ 1.47
SPHK1-202ENST00000392496 NT5DC1Q5TFE4 455 aa24.23■■□□□ 1.47
SPHK1-202ENST00000392496 GINM1Q9NU53 330 aa24.23■■□□□ 1.47
SPHK1-202ENST00000392496 PCDHA1Q9Y5I3 950 aa24.23■■□□□ 1.47
SPHK1-202ENST00000392496 BECN2A8MW95 431 aa24.22■■□□□ 1.47
SPHK1-202ENST00000392496 FOXN1O15353 648 aa24.22■■□□□ 1.47
SPHK1-202ENST00000392496 PLCB2Q00722 1185 aa24.22■■□□□ 1.47
SPHK1-202ENST00000392496 IKQ13123 557 aaPredicted RBP24.22■■□□□ 1.47
SPHK1-202ENST00000392496 SH3RF1Q7Z6J0 888 aa24.22■■□□□ 1.47
SPHK1-202ENST00000392496 DHX40Q8IX18 779 aaKnown RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms