RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 AKR1B1P15121 316 aa18.42■□□□□ 0.54
SNX9-201ENST00000392185 CETN2P41208 172 aa18.42■□□□□ 0.54
SNX9-201ENST00000392185 RGS22Q8NE09 1264 aa18.42■□□□□ 0.54
SNX9-201ENST00000392185 FAM207AQ9NSI2 230 aaPredicted RBP18.42■□□□□ 0.54
SNX9-201ENST00000392185 TRAPPC10P48553 1259 aa18.41■□□□□ 0.54
SNX9-201ENST00000392185 ANTXR2P58335 489 aa18.41■□□□□ 0.54
SNX9-201ENST00000392185 AS3MTQ9HBK9 375 aa18.41■□□□□ 0.54
SNX9-201ENST00000392185 PLEKHG2Q9H7P9 1386 aa18.41■□□□□ 0.54
SNX9-201ENST00000392185 KRT86O43790 486 aa18.41■□□□□ 0.54
SNX9-201ENST00000392185 EPB41P11171 864 aaKnown RBP18.41■□□□□ 0.54
SNX9-201ENST00000392185 LONP1P36776 959 aaKnown RBP18.41■□□□□ 0.54
SNX9-201ENST00000392185 EZH2Q15910 746 aaKnown RBP18.41■□□□□ 0.54
SNX9-201ENST00000392185 ARHGEF16Q5VV41 709 aa18.41■□□□□ 0.54
SNX9-201ENST00000392185 DPH6Q7L8W6 267 aa18.41■□□□□ 0.54
SNX9-201ENST00000392185 MIER3Q7Z3K6 550 aa18.41■□□□□ 0.54
SNX9-201ENST00000392185 ANKRD35Q8N283 1001 aa18.41■□□□□ 0.54
SNX9-201ENST00000392185 NLRC4Q9NPP4 1024 aa18.41■□□□□ 0.54
SNX9-201ENST00000392185 GOLGA6L10A6NI86 522 aa18.41■□□□□ 0.54
SNX9-201ENST00000392185 EIF3JO75822 258 aaKnown RBP18.41■□□□□ 0.54
SNX9-201ENST00000392185 PPP1R2P41236 205 aa18.41■□□□□ 0.54
SNX9-201ENST00000392185 CACNB1Q02641 598 aaPredicted RBP18.41■□□□□ 0.54
SNX9-201ENST00000392185 PABPC4Q13310 644 aaKnown RBP eCLIP18.41■□□□□ 0.54
SNX9-201ENST00000392185 SGMS1Q86VZ5 419 aa18.41■□□□□ 0.54
SNX9-201ENST00000392185 CAPZA3Q96KX2 299 aa18.41■□□□□ 0.54
SNX9-201ENST00000392185 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.41■□□□□ 0.54
SNX9-201ENST00000392185 GTPBP6O43824 516 aaPredicted RBP18.4■□□□□ 0.54
SNX9-201ENST00000392185 BIRC3Q13489 604 aa18.4■□□□□ 0.54
SNX9-201ENST00000392185 NRBP1Q9UHY1 535 aa18.4■□□□□ 0.54
SNX9-201ENST00000392185 FSD2A1L4K1 749 aa18.4■□□□□ 0.54
SNX9-201ENST00000392185 RPN1P04843 607 aaKnown RBP18.4■□□□□ 0.54
SNX9-201ENST00000392185 CASP1P29466 404 aa18.4■□□□□ 0.54
SNX9-201ENST00000392185 KRT83P78385 493 aa18.4■□□□□ 0.54
SNX9-201ENST00000392185 CDC37Q16543 378 aaPredicted RBP18.4■□□□□ 0.54
SNX9-201ENST00000392185 CCDC122Q5T0U0 273 aa18.4■□□□□ 0.54
SNX9-201ENST00000392185 WTIPA6NIX2 430 aaPredicted RBP18.4■□□□□ 0.54
SNX9-201ENST00000392185 STAT2P52630 851 aa18.4■□□□□ 0.54
SNX9-201ENST00000392185 EXOC3O60645 756 aa18.39■□□□□ 0.54
SNX9-201ENST00000392185 CCDC172P0C7W6 258 aa18.39■□□□□ 0.54
SNX9-201ENST00000392185 SMTNP53814 917 aa18.39■□□□□ 0.54
SNX9-201ENST00000392185 IMPG2Q9BZV3 1241 aa18.39■□□□□ 0.54
SNX9-201ENST00000392185 TACC1O75410 805 aa18.39■□□□□ 0.53
SNX9-201ENST00000392185 CBX1P83916 185 aa18.39■□□□□ 0.53
SNX9-201ENST00000392185 COL23A1Q86Y22 540 aaPredicted RBP18.39■□□□□ 0.53
SNX9-201ENST00000392185 IGDCC4Q8TDY8 1250 aa18.39■□□□□ 0.53
SNX9-201ENST00000392185 ZNF341Q9BYN7 854 aa18.39■□□□□ 0.53
SNX9-201ENST00000392185 R3HDM1Q15032 1099 aaKnown RBP18.39■□□□□ 0.53
SNX9-201ENST00000392185 TMEM179Q6ZVK1 233 aa18.39■□□□□ 0.53
SNX9-201ENST00000392185 ZNF512BQ96KM6 892 aaPredicted RBP18.39■□□□□ 0.53
SNX9-201ENST00000392185 USP17L15C9J2P7 530 aa18.38■□□□□ 0.53
SNX9-201ENST00000392185 USP17L13C9JLJ4 530 aa18.38■□□□□ 0.53
SNX9-201ENST00000392185 USP17L11C9JVI0 530 aa18.38■□□□□ 0.53
SNX9-201ENST00000392185 USP17L18D6R9N7 530 aa18.38■□□□□ 0.53
SNX9-201ENST00000392185 USP17L22D6RA61 530 aa18.38■□□□□ 0.53
SNX9-201ENST00000392185 USP17L17D6RBQ6 530 aa18.38■□□□□ 0.53
SNX9-201ENST00000392185 USP17L19D6RCP7 530 aa18.38■□□□□ 0.53
SNX9-201ENST00000392185 USP17L20D6RJB6 530 aa18.38■□□□□ 0.53
SNX9-201ENST00000392185 EEF2P13639 858 aaKnown RBP18.38■□□□□ 0.53
SNX9-201ENST00000392185 USP17L24Q0WX57 530 aa18.38■□□□□ 0.53
SNX9-201ENST00000392185 SYDE2Q5VT97 1194 aa18.38■□□□□ 0.53
SNX9-201ENST00000392185 USP17L6PQ6QN14 398 aa18.38■□□□□ 0.53
SNX9-201ENST00000392185 EHBP1Q8NDI1 1231 aa18.38■□□□□ 0.53
SNX9-201ENST00000392185 CAMTA1Q9Y6Y1 1673 aa18.38■□□□□ 0.53
SNX9-201ENST00000392185 KIF28PB7ZC32 967 aa18.38■□□□□ 0.53
SNX9-201ENST00000392185 MEIS1O00470 390 aa18.38■□□□□ 0.53
SNX9-201ENST00000392185 FOSP01100 380 aaPredicted RBP18.38■□□□□ 0.53
SNX9-201ENST00000392185 SPECC1LQ69YQ0 1117 aa18.38■□□□□ 0.53
SNX9-201ENST00000392185 GLG1Q92896 1179 aa18.38■□□□□ 0.53
SNX9-201ENST00000392185 SRPRBQ9Y5M8 271 aaKnown RBP18.38■□□□□ 0.53
SNX9-201ENST00000392185 SLFN14P0C7P3 912 aa18.38■□□□□ 0.53
SNX9-201ENST00000392185 NCAPG2Q86XI2 1143 aa18.38■□□□□ 0.53
SNX9-201ENST00000392185 USP17L10C9JJH3 530 aa18.37■□□□□ 0.53
SNX9-201ENST00000392185 MORC3Q14149 939 aa18.37■□□□□ 0.53
SNX9-201ENST00000392185 FAM26FQ5R3K3 315 aa18.37■□□□□ 0.53
SNX9-201ENST00000392185 TAX1BP1Q86VP1 789 aa18.37■□□□□ 0.53
SNX9-201ENST00000392185 MYOCDQ8IZQ8 938 aa18.37■□□□□ 0.53
SNX9-201ENST00000392185 GBP3Q9H0R5 595 aa18.37■□□□□ 0.53
SNX9-201ENST00000392185 CTAGE9A4FU28 777 aa18.37■□□□□ 0.53
SNX9-201ENST00000392185 DESP17661 470 aa18.37■□□□□ 0.53
SNX9-201ENST00000392185 LRRC41Q15345 812 aa18.37■□□□□ 0.53
SNX9-201ENST00000392185 PFKFB3Q16875 520 aaPredicted RBP18.37■□□□□ 0.53
SNX9-201ENST00000392185 NEDD1Q8NHV4 660 aa18.37■□□□□ 0.53
SNX9-201ENST00000392185 IFT74Q96LB3 600 aa18.37■□□□□ 0.53
SNX9-201ENST00000392185 FNBP1Q96RU3 617 aa18.37■□□□□ 0.53
SNX9-201ENST00000392185 SLF1Q9BQI6 1058 aa18.37■□□□□ 0.53
SNX9-201ENST00000392185 BAZ2BQ9UIF8 2168 aaKnown RBP18.36■□□□□ 0.53
SNX9-201ENST00000392185 KCNJ18B7U540 433 aa18.36■□□□□ 0.53
SNX9-201ENST00000392185 SLU7O95391 586 aaKnown RBP18.36■□□□□ 0.53
SNX9-201ENST00000392185 GJC1P36383 396 aa18.36■□□□□ 0.53
SNX9-201ENST00000392185 KCNJ12Q14500 433 aa18.36■□□□□ 0.53
SNX9-201ENST00000392185 LRCH2Q5VUJ6 765 aa18.36■□□□□ 0.53
SNX9-201ENST00000392185 SRBD1Q8N5C6 995 aaKnown RBP18.36■□□□□ 0.53
SNX9-201ENST00000392185 TDRD7Q8NHU6 1098 aaKnown RBP18.36■□□□□ 0.53
SNX9-201ENST00000392185 TMEM110-MUSTN1A8MSY1 372 aa18.36■□□□□ 0.53
SNX9-201ENST00000392185 POLR3GO15318 223 aaPredicted RBP18.36■□□□□ 0.53
SNX9-201ENST00000392185 NEFHP12036 1026 aa18.36■□□□□ 0.53
SNX9-201ENST00000392185 WDR19Q8NEZ3 1342 aa18.36■□□□□ 0.53
SNX9-201ENST00000392185 PNMA6FA0A0J9YX94 578 aa18.36■□□□□ 0.53
SNX9-201ENST00000392185 CTAGE15A4D2H0 777 aa18.36■□□□□ 0.53
SNX9-201ENST00000392185 F5H6K3 240 aa18.36■□□□□ 0.53
SNX9-201ENST00000392185 ORC4O43929 436 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms