RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 FOXR1Q6PIV2 292 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 FKBP9P1Q75LS8 142 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 EPM2AIP1Q7L775 607 aaPredicted RBP2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 C11orf74Q86VG3 221 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 AMOTL1Q8IY63 956 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 C7orf61Q8IZ16 206 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 KCT2Q8NC54 265 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 SMC1BQ8NDV3 1235 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 ZNF507Q8TCN5 953 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 CYB5D2Q8WUJ1 264 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 GJA10Q969M2 543 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 RUNDC1Q96C34 613 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 TIFAQ96CG3 184 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 WDR89Q96FK6 387 aaPredicted RBP2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 AHCYL2Q96HN2 611 aaKnown RBP2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 ZFYVE21Q9BQ24 234 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 LPIN3Q9BQK8 851 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 HERPUD2Q9BSE4 406 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 NKX2-4Q9H2Z4 354 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 PTPRHQ9HD43 1115 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 PLCB1Q9NQ66 1216 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 PRDM6Q9NQX0 595 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 DDX21Q9NR30 783 aaKnown RBP eCLIP2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 PICK1Q9NRD5 415 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 C1orf112Q9NSG2 853 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 FAM86C1Q9NVL1 165 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 SAMD15Q9P1V8 674 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 PUF60Q9UHX1 559 aaKnown RBP2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 DIS3Q9Y2L1 958 aaKnown RBP2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 ZKSCAN5Q9Y2L8 839 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 HIF3AQ9Y2N7 669 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 DAAM1Q9Y4D1 1078 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 ZNF451Q9Y4E5 1061 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 PPP2R3BQ9Y5P8 575 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 MRFAP1Q9Y605 127 aa2.1□□□□□ -2.07
TRAJ39-201ENST00000390498 KLRG2A4D1S0 409 aaPredicted RBP2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 BLACEA4D250 179 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 ZNF891A8MT65 544 aaPredicted RBP2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 FZD9O00144 591 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 APAF1O14727 1248 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 FSCN2O14926 492 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 MAN1A2O60476 641 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 RGS9O75916 674 aaPredicted RBP2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 KCNH1O95259 989 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 AVPP01185 164 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 SNRPB2P08579 225 aaKnown RBP2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 RBP3P10745 1247 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 HSPA6P17066 643 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 TYRP1P17643 537 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 KCNA6P17658 529 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 LIG1P18858 919 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 AKAP5P24588 427 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 CAP2P40123 477 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 ADH7P40394 386 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 IARSP41252 1262 aaKnown RBP2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 ADCYAP1R1P41586 468 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 KCNJ6P48051 423 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 TRAPPC10P48553 1259 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 PPM1FP49593 454 aaPredicted RBP2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 AFF1P51825 1210 aaKnown RBP2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 RNF4P78317 190 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 CTBSQ01459 385 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 ID3Q02535 119 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 PTSQ03393 145 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 AUHQ13825 339 aaKnown RBP2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 GRM3Q14832 879 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 SUZ12Q15022 739 aaKnown RBP2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 PCBP2Q15366 365 aaKnown RBP eCLIP2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 ABCB5Q2M3G0 1257 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 ALFQ53S48 1182 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 PPM1JQ5JR12 505 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 SLC35F1Q5T1Q4 408 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 NBPF12Q5TAG4 269 aaPredicted RBP2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 DCAF15Q66K64 600 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 GTF2IRD2BQ6EKJ0 949 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 CCDC70Q6NSX1 233 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 RSPO2Q6UXX9 243 aaPredicted RBP2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 KRBA2Q6ZNG9 492 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 CHST15Q7LFX5 561 aaPredicted RBP2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 TRIM46Q7Z4K8 759 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 HDGFL2Q7Z4V5 671 aaPredicted RBP2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 PODNQ7Z5L7 613 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 GTF2IRD2Q86UP8 949 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 PNMA8AQ86V59 439 aaPredicted RBP2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 CMTR2Q8IYT2 770 aaKnown RBP2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 IFNL2Q8IZJ0 200 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 CPXCR1Q8N123 301 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 FAM43AQ8N2R8 423 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 NXPE1Q8N323 547 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 TMTC2Q8N394 836 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 ANKRD42Q8N9B4 389 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 TEX19Q8NA77 164 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 KLHL23Q8NBE8 558 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 RNF214Q8ND24 703 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 C1orf162Q8NEQ5 155 aaPredicted RBP2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 SYTL5Q8TDW5 730 aaPredicted RBP2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 DCAF4Q8WV16 495 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 BTN2A2Q8WVV5 523 aa2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 GTPBP3Q969Y2 492 aaKnown RBP2.09□□□□□ -2.07
TRAJ39-201ENST00000390498 HSPBAP1Q96EW2 488 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms