RNA–Protein interactions for RNA: ENST00000390443.3

TRAV8-6-201, Transcript of T cell receptor alpha variable 8-6, humanhuman

APPRIS P1 BASIC

Gene TRAV8-6, Length 561 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6-201ENST00000390443 HOMER2Q9NSB8 354 aa11.02□□□□□ -0.65
TRAV8-6-201ENST00000390443 ZBTB40Q9NUA8 1239 aa11.02□□□□□ -0.65
TRAV8-6-201ENST00000390443 ISY1Q9ULR0 285 aaKnown RBP11.02□□□□□ -0.65
TRAV8-6-201ENST00000390443 DDX19BQ9UMR2 479 aa11.02□□□□□ -0.65
TRAV8-6-201ENST00000390443 COG6Q9Y2V7 657 aa11.02□□□□□ -0.65
TRAV8-6-201ENST00000390443 ATP2A1O14983 1001 aa11.01□□□□□ -0.65
TRAV8-6-201ENST00000390443 TLR3O15455 904 aaKnown RBP11.01□□□□□ -0.65
TRAV8-6-201ENST00000390443 IGFBP4P22692 258 aa11.01□□□□□ -0.65
TRAV8-6-201ENST00000390443 GJA9P57773 515 aa11.01□□□□□ -0.65
TRAV8-6-201ENST00000390443 SBK1Q52WX2 424 aa11.01□□□□□ -0.65
TRAV8-6-201ENST00000390443 PSRC1Q6PGN9 363 aaPredicted RBP11.01□□□□□ -0.65
TRAV8-6-201ENST00000390443 FAM126BQ8IXS8 530 aa11.01□□□□□ -0.65
TRAV8-6-201ENST00000390443 CCDC144CPQ8IYA2 1237 aa11.01□□□□□ -0.65
TRAV8-6-201ENST00000390443 ZNF444Q8N0Y2 327 aaPredicted RBP11.01□□□□□ -0.65
TRAV8-6-201ENST00000390443 LRRC47Q8N1G4 583 aaKnown RBP11.01□□□□□ -0.65
TRAV8-6-201ENST00000390443 CHST13Q8NET6 341 aa11.01□□□□□ -0.65
TRAV8-6-201ENST00000390443 UPF3AQ9H1J1 476 aaKnown RBP11.01□□□□□ -0.65
TRAV8-6-201ENST00000390443 SLC38A10Q9HBR0 1119 aa11.01□□□□□ -0.65
TRAV8-6-201ENST00000390443 FBXO40Q9UH90 709 aa11.01□□□□□ -0.65
TRAV8-6-201ENST00000390443 MSRAQ9UJ68 235 aa11.01□□□□□ -0.65
TRAV8-6-201ENST00000390443 GSG1L2A8MUP6 293 aa11□□□□□ -0.65
TRAV8-6-201ENST00000390443 SMARCA5O60264 1052 aaPredicted RBP11□□□□□ -0.65
TRAV8-6-201ENST00000390443 PRDM1O75626 825 aa11□□□□□ -0.65
TRAV8-6-201ENST00000390443 APPP05067 770 aa11□□□□□ -0.65
TRAV8-6-201ENST00000390443 CYP2C18P33260 490 aa11□□□□□ -0.65
TRAV8-6-201ENST00000390443 TDO2P48775 406 aa11□□□□□ -0.65
TRAV8-6-201ENST00000390443 BEX3Q00994 111 aa11□□□□□ -0.65
TRAV8-6-201ENST00000390443 TNFAIP2Q03169 654 aa11□□□□□ -0.65
TRAV8-6-201ENST00000390443 CCDC85BQ15834 202 aaPredicted RBP11□□□□□ -0.65
TRAV8-6-201ENST00000390443 AKNAD1Q5T1N1 836 aa11□□□□□ -0.65
TRAV8-6-201ENST00000390443 RASIP1Q5U651 963 aa11□□□□□ -0.65
TRAV8-6-201ENST00000390443 CXCL17Q6UXB2 119 aa11□□□□□ -0.65
TRAV8-6-201ENST00000390443 ATXN2LQ8WWM7 1075 aaKnown RBP11□□□□□ -0.65
TRAV8-6-201ENST00000390443 CEP95Q96GE4 821 aa11□□□□□ -0.65
TRAV8-6-201ENST00000390443 FGD4Q96M96 766 aa11□□□□□ -0.65
TRAV8-6-201ENST00000390443 LRRCC1Q9C099 1032 aa11□□□□□ -0.65
TRAV8-6-201ENST00000390443 ZNF287Q9HBT7 754 aa11□□□□□ -0.65
TRAV8-6-201ENST00000390443 THEGQ9P2T0 379 aa11□□□□□ -0.65
TRAV8-6-201ENST00000390443 FEM1BQ9UK73 627 aa11□□□□□ -0.65
TRAV8-6-201ENST00000390443 IGKV6D-41A0A0C4DH26 115 aa10.99□□□□□ -0.65
TRAV8-6-201ENST00000390443 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.99□□□□□ -0.65
TRAV8-6-201ENST00000390443 FGBP02675 491 aa10.99□□□□□ -0.65
TRAV8-6-201ENST00000390443 COL9A1P20849 921 aa10.99□□□□□ -0.65
TRAV8-6-201ENST00000390443 OAZ1P54368 228 aa10.99□□□□□ -0.65
TRAV8-6-201ENST00000390443 CNTN2Q02246 1040 aa10.99□□□□□ -0.65
TRAV8-6-201ENST00000390443 ADGRE1Q14246 886 aa10.99□□□□□ -0.65
TRAV8-6-201ENST00000390443 RAB30Q15771 203 aa10.99□□□□□ -0.65
TRAV8-6-201ENST00000390443 SLFN13Q68D06 897 aa10.99□□□□□ -0.65
TRAV8-6-201ENST00000390443 GIMAP6Q6P9H5 292 aa10.99□□□□□ -0.65
TRAV8-6-201ENST00000390443 IL27Q8NEV9 243 aa10.99□□□□□ -0.65
TRAV8-6-201ENST00000390443 OSBP2Q969R2 916 aa10.99□□□□□ -0.65
TRAV8-6-201ENST00000390443 CHMP4CQ96CF2 233 aa10.99□□□□□ -0.65
TRAV8-6-201ENST00000390443 ASB2Q96Q27 587 aa10.99□□□□□ -0.65
TRAV8-6-201ENST00000390443 MTIF3Q9H2K0 278 aaKnown RBP10.99□□□□□ -0.65
TRAV8-6-201ENST00000390443 NKX2-4Q9H2Z4 354 aa10.99□□□□□ -0.65
TRAV8-6-201ENST00000390443 HIPK3Q9H422 1215 aa10.99□□□□□ -0.65
TRAV8-6-201ENST00000390443 IL23AQ9NPF7 189 aa10.99□□□□□ -0.65
TRAV8-6-201ENST00000390443 ECHDC1Q9NTX5 307 aa10.99□□□□□ -0.65
TRAV8-6-201ENST00000390443 MTMR4Q9NYA4 1195 aa10.99□□□□□ -0.65
TRAV8-6-201ENST00000390443 CXXC1Q9P0U4 656 aaPredicted RBP10.99□□□□□ -0.65
TRAV8-6-201ENST00000390443 TMEM232C9JQI7 657 aa10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 CTAGE5O15320 804 aa10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 GPAA1O43292 621 aa10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 TTLL1O95922 423 aa10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 CD4P01730 458 aa10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 BMP3P12645 472 aa10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 CCL23P55773 120 aa10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 IKQ13123 557 aaPredicted RBP10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 FSCN1Q16658 493 aaKnown RBP10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 OTOP2Q7RTS6 562 aa10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 TLK2Q86UE8 772 aa10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 KBTBD3Q8NAB2 608 aa10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 GMCL1P1Q8NEA9 526 aa10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 ADAMTS19Q8TE59 1207 aa10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 HERVK_113Q902F9 699 aa10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 APPBP2Q92624 585 aa10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 MKL1Q969V6 931 aa10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 KATNBL1Q9H079 304 aa10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 AP5M1Q9H0R1 490 aa10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 CHMP4BQ9H444 224 aaKnown RBP10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 ACAD9Q9H845 621 aa10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 SLC28A3Q9HAS3 691 aa10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 EPB41L4AQ9HCS5 686 aaPredicted RBP10.98□□□□□ -0.65
TRAV8-6-201ENST00000390443 SOWAHBA6NEL2 793 aa10.97□□□□□ -0.65
TRAV8-6-201ENST00000390443 RNF113AO15541 343 aaKnown RBP10.97□□□□□ -0.65
TRAV8-6-201ENST00000390443 DYNC1LI2O43237 492 aaPredicted RBP10.97□□□□□ -0.65
TRAV8-6-201ENST00000390443 ZEB2O60315 1214 aa10.97□□□□□ -0.65
TRAV8-6-201ENST00000390443 CABYRO75952 493 aa10.97□□□□□ -0.65
TRAV8-6-201ENST00000390443 TSPY3P0CV98 308 aa10.97□□□□□ -0.65
TRAV8-6-201ENST00000390443 TSPY8P0CW00 308 aa10.97□□□□□ -0.65
TRAV8-6-201ENST00000390443 PTGS1P23219 599 aa10.97□□□□□ -0.65
TRAV8-6-201ENST00000390443 STAT2P52630 851 aa10.97□□□□□ -0.65
TRAV8-6-201ENST00000390443 MRPS5P82675 430 aaKnown RBP10.97□□□□□ -0.65
TRAV8-6-201ENST00000390443 ITGA7Q13683 1181 aa10.97□□□□□ -0.65
TRAV8-6-201ENST00000390443 TSHZ3Q63HK5 1081 aa10.97□□□□□ -0.65
TRAV8-6-201ENST00000390443 MICALL1Q8N3F8 863 aa10.97□□□□□ -0.65
TRAV8-6-201ENST00000390443 FAM133AQ8N9E0 248 aa10.97□□□□□ -0.65
TRAV8-6-201ENST00000390443 AGBL1Q96MI9 1066 aa10.97□□□□□ -0.65
TRAV8-6-201ENST00000390443 UHRF1Q96T88 793 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms