RNA–Protein interactions for RNA: ENST00000390439.2

TRAV13-2-201, Transcript of T cell receptor alpha variable 13-2, humanhuman

APPRIS P1 BASIC

Gene TRAV13-2, Length 410 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2-201ENST00000390439 ASB2Q96Q27 587 aa11.61□□□□□ -0.55
TRAV13-2-201ENST00000390439 NUP88Q99567 741 aaPredicted RBP11.61□□□□□ -0.55
TRAV13-2-201ENST00000390439 PBX4Q9BYU1 374 aa11.61□□□□□ -0.55
TRAV13-2-201ENST00000390439 UPF3AQ9H1J1 476 aaKnown RBP11.61□□□□□ -0.55
TRAV13-2-201ENST00000390439 PRDM12Q9H4Q4 367 aa11.61□□□□□ -0.55
TRAV13-2-201ENST00000390439 THEGQ9P2T0 379 aa11.61□□□□□ -0.55
TRAV13-2-201ENST00000390439 MINDY4BA8MYZ0 360 aa11.6□□□□□ -0.55
TRAV13-2-201ENST00000390439 SMIM22K7EJ46 135 aa11.6□□□□□ -0.55
TRAV13-2-201ENST00000390439 ACRP10323 421 aa11.6□□□□□ -0.55
TRAV13-2-201ENST00000390439 HNRNPUQ00839 825 aaKnown RBP eCLIP11.6□□□□□ -0.55
TRAV13-2-201ENST00000390439 TNFAIP2Q03169 654 aa11.6□□□□□ -0.55
TRAV13-2-201ENST00000390439 RASIP1Q5U651 963 aa11.6□□□□□ -0.55
TRAV13-2-201ENST00000390439 C16orf59Q7L2K0 433 aa11.6□□□□□ -0.55
TRAV13-2-201ENST00000390439 ARMCX2Q7L311 632 aa11.6□□□□□ -0.55
TRAV13-2-201ENST00000390439 HERVK_113Q902F9 699 aa11.6□□□□□ -0.55
TRAV13-2-201ENST00000390439 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.6□□□□□ -0.55
TRAV13-2-201ENST00000390439 PPP1R12CQ9BZL4 782 aa11.6□□□□□ -0.55
TRAV13-2-201ENST00000390439 PUS7LQ9H0K6 701 aaKnown RBP11.6□□□□□ -0.55
TRAV13-2-201ENST00000390439 AP5M1Q9H0R1 490 aa11.6□□□□□ -0.55
TRAV13-2-201ENST00000390439 SLC28A3Q9HAS3 691 aa11.6□□□□□ -0.55
TRAV13-2-201ENST00000390439 SLC38A10Q9HBR0 1119 aa11.6□□□□□ -0.55
TRAV13-2-201ENST00000390439 RAVER2Q9HCJ3 691 aaKnown RBP11.6□□□□□ -0.55
TRAV13-2-201ENST00000390439 IL23AQ9NPF7 189 aa11.6□□□□□ -0.55
TRAV13-2-201ENST00000390439 ISY1Q9ULR0 285 aaKnown RBP11.6□□□□□ -0.55
TRAV13-2-201ENST00000390439 DDX19BQ9UMR2 479 aa11.6□□□□□ -0.55
TRAV13-2-201ENST00000390439 SYNPO2Q9UMS6 1093 aa11.6□□□□□ -0.55
TRAV13-2-201ENST00000390439 RIPK3Q9Y572 518 aa11.6□□□□□ -0.55
TRAV13-2-201ENST00000390439 PRUNE2Q8WUY3 3088 aa11.6□□□□□ -0.55
TRAV13-2-201ENST00000390439 MYADML2A6NDP7 307 aa11.59□□□□□ -0.55
TRAV13-2-201ENST00000390439 ASB14A6NK59 587 aa11.59□□□□□ -0.55
TRAV13-2-201ENST00000390439 GRXCR1A8MXD5 290 aa11.59□□□□□ -0.55
TRAV13-2-201ENST00000390439 GNAT2P19087 354 aa11.59□□□□□ -0.55
TRAV13-2-201ENST00000390439 RASA1P20936 1047 aa11.59□□□□□ -0.55
TRAV13-2-201ENST00000390439 PBX2P40425 430 aa11.59□□□□□ -0.55
TRAV13-2-201ENST00000390439 FAM126BQ8IXS8 530 aa11.59□□□□□ -0.55
TRAV13-2-201ENST00000390439 RPUSD2Q8IZ73 545 aaKnown RBP11.59□□□□□ -0.55
TRAV13-2-201ENST00000390439 STK11IPQ8N1F8 1099 aa11.59□□□□□ -0.55
TRAV13-2-201ENST00000390439 CHURC1Q8WUH1 139 aa11.59□□□□□ -0.55
TRAV13-2-201ENST00000390439 MKL1Q969V6 931 aa11.59□□□□□ -0.55
TRAV13-2-201ENST00000390439 STRBPQ96SI9 672 aaKnown RBP11.59□□□□□ -0.55
TRAV13-2-201ENST00000390439 HIPK3Q9H422 1215 aa11.59□□□□□ -0.55
TRAV13-2-201ENST00000390439 TTLL1O95922 423 aa11.58□□□□□ -0.56
TRAV13-2-201ENST00000390439 CD4P01730 458 aa11.58□□□□□ -0.56
TRAV13-2-201ENST00000390439 APPP05067 770 aa11.58□□□□□ -0.56
TRAV13-2-201ENST00000390439 BMP3P12645 472 aa11.58□□□□□ -0.56
TRAV13-2-201ENST00000390439 CYP2C18P33260 490 aa11.58□□□□□ -0.56
TRAV13-2-201ENST00000390439 IKQ13123 557 aaPredicted RBP11.58□□□□□ -0.56
TRAV13-2-201ENST00000390439 CCDC85BQ15834 202 aaPredicted RBP11.58□□□□□ -0.56
TRAV13-2-201ENST00000390439 LRRFIP1Q32MZ4 808 aaKnown RBP11.58□□□□□ -0.56
TRAV13-2-201ENST00000390439 TKFCQ3LXA3 575 aa11.58□□□□□ -0.56
TRAV13-2-201ENST00000390439 PPP4R3BQ5MIZ7 849 aa11.58□□□□□ -0.56
TRAV13-2-201ENST00000390439 CCDC144CPQ8IYA2 1237 aa11.58□□□□□ -0.56
TRAV13-2-201ENST00000390439 GMCL1P1Q8NEA9 526 aa11.58□□□□□ -0.56
TRAV13-2-201ENST00000390439 GPATCH3Q96I76 525 aa11.58□□□□□ -0.56
TRAV13-2-201ENST00000390439 UHRF1Q96T88 793 aaPredicted RBP11.58□□□□□ -0.56
TRAV13-2-201ENST00000390439 LRRCC1Q9C099 1032 aa11.58□□□□□ -0.56
TRAV13-2-201ENST00000390439 ACAD9Q9H845 621 aa11.58□□□□□ -0.56
TRAV13-2-201ENST00000390439 HOMER2Q9NSB8 354 aa11.58□□□□□ -0.56
TRAV13-2-201ENST00000390439 COG6Q9Y2V7 657 aa11.58□□□□□ -0.56
TRAV13-2-201ENST00000390439 SPTBN5Q9NRC6 3674 aaKnown RBP11.57□□□□□ -0.56
TRAV13-2-201ENST00000390439 MYH8P13535 1937 aa11.57□□□□□ -0.56
TRAV13-2-201ENST00000390439 GSG1L2A8MUP6 293 aa11.57□□□□□ -0.56
TRAV13-2-201ENST00000390439 SLC3A2P08195 630 aaKnown RBP11.57□□□□□ -0.56
TRAV13-2-201ENST00000390439 TDO2P48775 406 aa11.57□□□□□ -0.56
TRAV13-2-201ENST00000390439 NKX3-2P78367 333 aa11.57□□□□□ -0.56
TRAV13-2-201ENST00000390439 BEX3Q00994 111 aa11.57□□□□□ -0.56
TRAV13-2-201ENST00000390439 ITGA7Q13683 1181 aa11.57□□□□□ -0.56
TRAV13-2-201ENST00000390439 FSCN1Q16658 493 aaKnown RBP11.57□□□□□ -0.56
TRAV13-2-201ENST00000390439 AAK1Q2M2I8 961 aa11.57□□□□□ -0.56
TRAV13-2-201ENST00000390439 SLFN13Q68D06 897 aa11.57□□□□□ -0.56
TRAV13-2-201ENST00000390439 FAM160B2Q86V87 743 aa11.57□□□□□ -0.56
TRAV13-2-201ENST00000390439 ADAMTS19Q8TE59 1207 aa11.57□□□□□ -0.56
TRAV13-2-201ENST00000390439 NACAP1Q9BZK3 213 aa11.57□□□□□ -0.56
TRAV13-2-201ENST00000390439 NKX2-4Q9H2Z4 354 aa11.57□□□□□ -0.56
TRAV13-2-201ENST00000390439 ZBTB40Q9NUA8 1239 aa11.57□□□□□ -0.56
TRAV13-2-201ENST00000390439 MTMR4Q9NYA4 1195 aa11.57□□□□□ -0.56
TRAV13-2-201ENST00000390439 SLC4A7Q9Y6M7 1214 aa11.57□□□□□ -0.56
TRAV13-2-201ENST00000390439 PLXNA1Q9UIW2 1896 aa11.57□□□□□ -0.56
TRAV13-2-201ENST00000390439 CDH23Q9H251 3354 aa11.56□□□□□ -0.56
TRAV13-2-201ENST00000390439 COL11A1P12107 1806 aaPredicted RBP11.56□□□□□ -0.56
TRAV13-2-201ENST00000390439 TMEM232C9JQI7 657 aa11.56□□□□□ -0.56
TRAV13-2-201ENST00000390439 DYNC1LI2O43237 492 aaPredicted RBP11.56□□□□□ -0.56
TRAV13-2-201ENST00000390439 ZFYP08048 801 aaPredicted RBP11.56□□□□□ -0.56
TRAV13-2-201ENST00000390439 SUPT20HL2P0C7V6 817 aa11.56□□□□□ -0.56
TRAV13-2-201ENST00000390439 TSPY3P0CV98 308 aa11.56□□□□□ -0.56
TRAV13-2-201ENST00000390439 TSPY8P0CW00 308 aa11.56□□□□□ -0.56
TRAV13-2-201ENST00000390439 STAT2P52630 851 aa11.56□□□□□ -0.56
TRAV13-2-201ENST00000390439 IRX5P78411 483 aaPredicted RBP11.56□□□□□ -0.56
TRAV13-2-201ENST00000390439 CNTN2Q02246 1040 aa11.56□□□□□ -0.56
TRAV13-2-201ENST00000390439 PDE4BQ07343 736 aa11.56□□□□□ -0.56
TRAV13-2-201ENST00000390439 IQSEC1Q6DN90 963 aa11.56□□□□□ -0.56
TRAV13-2-201ENST00000390439 CXCL17Q6UXB2 119 aa11.56□□□□□ -0.56
TRAV13-2-201ENST00000390439 OTOP2Q7RTS6 562 aa11.56□□□□□ -0.56
TRAV13-2-201ENST00000390439 TLK2Q86UE8 772 aa11.56□□□□□ -0.56
TRAV13-2-201ENST00000390439 SIRT2Q8IXJ6 389 aa11.56□□□□□ -0.56
TRAV13-2-201ENST00000390439 SLC43A3Q8NBI5 491 aa11.56□□□□□ -0.56
TRAV13-2-201ENST00000390439 APPBP2Q92624 585 aa11.56□□□□□ -0.56
TRAV13-2-201ENST00000390439 CEP95Q96GE4 821 aa11.56□□□□□ -0.56
TRAV13-2-201ENST00000390439 ECHDC1Q9NTX5 307 aa11.56□□□□□ -0.56
TRAV13-2-201ENST00000390439 Q9Y3F1 56 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms