RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 ZHX1Q9UKY1 873 aaPredicted RBP13.12□□□□□ -0.31
TRAV3-201ENST00000390425 GBF1Q92538 1859 aa13.12□□□□□ -0.31
TRAV3-201ENST00000390425 PRUNE2Q8WUY3 3088 aa13.11□□□□□ -0.31
TRAV3-201ENST00000390425 KIAA0355O15063 1070 aa13.11□□□□□ -0.31
TRAV3-201ENST00000390425 CLTBP09497 229 aa13.11□□□□□ -0.31
TRAV3-201ENST00000390425 NOVP48745 357 aa13.11□□□□□ -0.31
TRAV3-201ENST00000390425 STAT2P52630 851 aa13.11□□□□□ -0.31
TRAV3-201ENST00000390425 ACLYP53396 1101 aa13.11□□□□□ -0.31
TRAV3-201ENST00000390425 EPHB4P54760 987 aa13.11□□□□□ -0.31
TRAV3-201ENST00000390425 ACVR2BQ13705 512 aa13.11□□□□□ -0.31
TRAV3-201ENST00000390425 ARMCX2Q7L311 632 aa13.11□□□□□ -0.31
TRAV3-201ENST00000390425 ANKRD35Q8N283 1001 aa13.11□□□□□ -0.31
TRAV3-201ENST00000390425 FAM133AQ8N9E0 248 aa13.11□□□□□ -0.31
TRAV3-201ENST00000390425 TSEN34Q9BSV6 310 aaKnown RBP13.11□□□□□ -0.31
TRAV3-201ENST00000390425 A1CFQ9NQ94 594 aaKnown RBP13.11□□□□□ -0.31
TRAV3-201ENST00000390425 HOMER2Q9NSB8 354 aa13.11□□□□□ -0.31
TRAV3-201ENST00000390425 FBXO40Q9UH90 709 aa13.11□□□□□ -0.31
TRAV3-201ENST00000390425 FAM184BQ9ULE4 1060 aa13.11□□□□□ -0.31
TRAV3-201ENST00000390425 VCANP13611 3396 aa13.11□□□□□ -0.31
TRAV3-201ENST00000390425 MYH6P13533 1939 aa13.11□□□□□ -0.31
TRAV3-201ENST00000390425 ASTN1O14525 1302 aa13.11□□□□□ -0.31
TRAV3-201ENST00000390425 A0A0D9SFI3 127 aa13.1□□□□□ -0.31
TRAV3-201ENST00000390425 CTAGE5O15320 804 aa13.1□□□□□ -0.31
TRAV3-201ENST00000390425 PQBP1O60828 265 aaKnown RBP13.1□□□□□ -0.31
TRAV3-201ENST00000390425 DUSP11O75319 330 aaKnown RBP13.1□□□□□ -0.31
TRAV3-201ENST00000390425 SLC3A2P08195 630 aaKnown RBP13.1□□□□□ -0.31
TRAV3-201ENST00000390425 MCCP23508 829 aa13.1□□□□□ -0.31
TRAV3-201ENST00000390425 CST5P28325 142 aaPredicted RBP13.1□□□□□ -0.31
TRAV3-201ENST00000390425 PDE1AP54750 535 aa13.1□□□□□ -0.31
TRAV3-201ENST00000390425 CNTN2Q02246 1040 aa13.1□□□□□ -0.31
TRAV3-201ENST00000390425 CCDC144BQ3MJ40 725 aa13.1□□□□□ -0.31
TRAV3-201ENST00000390425 ANKRD45Q5TZF3 282 aa13.1□□□□□ -0.31
TRAV3-201ENST00000390425 KCTD1Q719H9 257 aa13.1□□□□□ -0.31
TRAV3-201ENST00000390425 STAG1Q8WVM7 1258 aa13.1□□□□□ -0.31
TRAV3-201ENST00000390425 AGBL1Q96MI9 1066 aa13.1□□□□□ -0.31
TRAV3-201ENST00000390425 FAM161BQ96MY7 647 aa13.1□□□□□ -0.31
TRAV3-201ENST00000390425 UPF3AQ9H1J1 476 aaKnown RBP13.1□□□□□ -0.31
TRAV3-201ENST00000390425 ABHD16BQ9H3Z7 469 aa13.1□□□□□ -0.31
TRAV3-201ENST00000390425 RNF146Q9NTX7 359 aa13.1□□□□□ -0.31
TRAV3-201ENST00000390425 ANAPC4Q9UJX5 808 aa13.1□□□□□ -0.31
TRAV3-201ENST00000390425 CTDP1Q9Y5B0 961 aaPredicted RBP13.1□□□□□ -0.31
TRAV3-201ENST00000390425 DDX49Q9Y6V7 483 aaKnown RBP13.1□□□□□ -0.31
TRAV3-201ENST00000390425 SOWAHBA6NEL2 793 aa13.09□□□□□ -0.31
TRAV3-201ENST00000390425 MOXD2PA6NHM9 499 aa13.09□□□□□ -0.31
TRAV3-201ENST00000390425 ORC4O43929 436 aa13.09□□□□□ -0.31
TRAV3-201ENST00000390425 PLA2G6O60733 806 aa13.09□□□□□ -0.31
TRAV3-201ENST00000390425 FGRP09769 529 aa13.09□□□□□ -0.31
TRAV3-201ENST00000390425 FDX1P10109 184 aa13.09□□□□□ -0.31
TRAV3-201ENST00000390425 SLC1A4P43007 532 aa13.09□□□□□ -0.31
TRAV3-201ENST00000390425 SNAP25P60880 206 aa13.09□□□□□ -0.31
TRAV3-201ENST00000390425 FAAP100Q0VG06 881 aa13.09□□□□□ -0.31
TRAV3-201ENST00000390425 HDAC1Q13547 482 aaPredicted RBP13.09□□□□□ -0.31
TRAV3-201ENST00000390425 KCNA10Q16322 511 aa13.09□□□□□ -0.31
TRAV3-201ENST00000390425 ANKRD33Q7Z3H0 272 aa13.09□□□□□ -0.31
TRAV3-201ENST00000390425 FAM160B2Q86V87 743 aa13.09□□□□□ -0.31
TRAV3-201ENST00000390425 CCDC144CPQ8IYA2 1237 aa13.09□□□□□ -0.31
TRAV3-201ENST00000390425 EVI5LQ96CN4 794 aa13.09□□□□□ -0.31
TRAV3-201ENST00000390425 FAM227BQ96M60 508 aa13.09□□□□□ -0.31
TRAV3-201ENST00000390425 ACAD9Q9H845 621 aa13.09□□□□□ -0.31
TRAV3-201ENST00000390425 STARD7Q9NQZ5 370 aa13.09□□□□□ -0.31
TRAV3-201ENST00000390425 ISY1Q9ULR0 285 aaKnown RBP13.09□□□□□ -0.31
TRAV3-201ENST00000390425 STX8Q9UNK0 236 aa13.09□□□□□ -0.31
TRAV3-201ENST00000390425 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.08□□□□□ -0.32
TRAV3-201ENST00000390425 TSPY2A6NKD2 308 aa13.08□□□□□ -0.32
TRAV3-201ENST00000390425 RANBP6O60518 1105 aaKnown RBP13.08□□□□□ -0.32
TRAV3-201ENST00000390425 C6orf222P0C671 652 aaPredicted RBP13.08□□□□□ -0.32
TRAV3-201ENST00000390425 PTGS1P23219 599 aa13.08□□□□□ -0.32
TRAV3-201ENST00000390425 GJA9P57773 515 aa13.08□□□□□ -0.32
TRAV3-201ENST00000390425 ALX1Q15699 326 aa13.08□□□□□ -0.32
TRAV3-201ENST00000390425 MUM1L1Q5H9M0 696 aa13.08□□□□□ -0.32
TRAV3-201ENST00000390425 CCDC174Q6PII3 467 aa13.08□□□□□ -0.32
TRAV3-201ENST00000390425 ZNF589Q86UQ0 364 aaPredicted RBP13.08□□□□□ -0.32
TRAV3-201ENST00000390425 CHURC1Q8WUH1 139 aa13.08□□□□□ -0.32
TRAV3-201ENST00000390425 TOX2Q96NM4 488 aa13.08□□□□□ -0.32
TRAV3-201ENST00000390425 TBX21Q9UL17 535 aa13.08□□□□□ -0.32
TRAV3-201ENST00000390425 PRR12Q9ULL5 1215 aa13.08□□□□□ -0.32
TRAV3-201ENST00000390425 DLL1O00548 723 aa13.07□□□□□ -0.32
TRAV3-201ENST00000390425 ASGR1P07306 291 aa13.07□□□□□ -0.32
TRAV3-201ENST00000390425 ALAS1P13196 640 aa13.07□□□□□ -0.32
TRAV3-201ENST00000390425 RAG1P15918 1043 aa13.07□□□□□ -0.32
TRAV3-201ENST00000390425 CDK7P50613 346 aa13.07□□□□□ -0.32
TRAV3-201ENST00000390425 NKX3-2P78367 333 aa13.07□□□□□ -0.32
TRAV3-201ENST00000390425 ZNF697Q5TEC3 545 aa13.07□□□□□ -0.32
TRAV3-201ENST00000390425 RCSD1Q6JBY9 416 aa13.07□□□□□ -0.32
TRAV3-201ENST00000390425 TRERF1Q96PN7 1200 aa13.07□□□□□ -0.32
TRAV3-201ENST00000390425 TTYH1Q9H313 450 aaPredicted RBP13.07□□□□□ -0.32
TRAV3-201ENST00000390425 HELLSQ9NRZ9 838 aa13.07□□□□□ -0.32
TRAV3-201ENST00000390425 TMEM39AQ9NV64 488 aa13.07□□□□□ -0.32
TRAV3-201ENST00000390425 MTMR7Q9Y216 660 aa13.07□□□□□ -0.32
TRAV3-201ENST00000390425 ZMYM6O95789 1325 aa13.07□□□□□ -0.32
TRAV3-201ENST00000390425 FGAP02671 866 aa13.06□□□□□ -0.32
TRAV3-201ENST00000390425 SMAD3P84022 425 aaKnown RBP13.06□□□□□ -0.32
TRAV3-201ENST00000390425 IKQ13123 557 aaPredicted RBP13.06□□□□□ -0.32
TRAV3-201ENST00000390425 NMIQ13287 307 aaPredicted RBP13.06□□□□□ -0.32
TRAV3-201ENST00000390425 TKFCQ3LXA3 575 aa13.06□□□□□ -0.32
TRAV3-201ENST00000390425 PPP4R3BQ5MIZ7 849 aa13.06□□□□□ -0.32
TRAV3-201ENST00000390425 TMEM63BQ5T3F8 832 aa13.06□□□□□ -0.32
TRAV3-201ENST00000390425 TTBK2Q6IQ55 1244 aa13.06□□□□□ -0.32
TRAV3-201ENST00000390425 NUP133Q8WUM0 1156 aa13.06□□□□□ -0.32
TRAV3-201ENST00000390425 PURBQ96QR8 312 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms