RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 FGD4Q96M96 766 aa14.23□□□□□ -0.13
SOD1-202ENST00000389995 RNF39Q9H2S5 420 aa14.23□□□□□ -0.13
SOD1-202ENST00000389995 EPHX3Q9H6B9 360 aa14.23□□□□□ -0.13
SOD1-202ENST00000389995 DDX49Q9Y6V7 483 aaKnown RBP14.23□□□□□ -0.13
SOD1-202ENST00000389995 LCTP09848 1927 aa14.23□□□□□ -0.13
SOD1-202ENST00000389995 PTPRSQ13332 1948 aa14.23□□□□□ -0.13
SOD1-202ENST00000389995 TET1Q8NFU7 2136 aa14.23□□□□□ -0.13
SOD1-202ENST00000389995 WDFY4Q6ZS81 3184 aa14.22□□□□□ -0.13
SOD1-202ENST00000389995 TLR3O15455 904 aaKnown RBP14.22□□□□□ -0.13
SOD1-202ENST00000389995 CD4P01730 458 aa14.22□□□□□ -0.13
SOD1-202ENST00000389995 RLBP1P12271 317 aa14.22□□□□□ -0.13
SOD1-202ENST00000389995 GJA9P57773 515 aa14.22□□□□□ -0.13
SOD1-202ENST00000389995 TTF1Q15361 905 aaPredicted RBP14.22□□□□□ -0.13
SOD1-202ENST00000389995 SKIV2LQ15477 1246 aaKnown RBP14.22□□□□□ -0.13
SOD1-202ENST00000389995 C12orf60Q5U649 245 aa14.22□□□□□ -0.13
SOD1-202ENST00000389995 CXCL17Q6UXB2 119 aa14.22□□□□□ -0.13
SOD1-202ENST00000389995 ITPRIPQ8IWB1 547 aa14.22□□□□□ -0.13
SOD1-202ENST00000389995 PCSK9Q8NBP7 692 aaKnown RBP14.22□□□□□ -0.13
SOD1-202ENST00000389995 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.22□□□□□ -0.13
SOD1-202ENST00000389995 TEX13BQ9BXU2 312 aa14.22□□□□□ -0.13
SOD1-202ENST00000389995 UPF3AQ9H1J1 476 aaKnown RBP14.22□□□□□ -0.13
SOD1-202ENST00000389995 CERS4Q9HA82 394 aa14.22□□□□□ -0.13
SOD1-202ENST00000389995 GOPCQ9HD26 462 aa14.22□□□□□ -0.13
SOD1-202ENST00000389995 ASTN1O14525 1302 aa14.21□□□□□ -0.13
SOD1-202ENST00000389995 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.21□□□□□ -0.13
SOD1-202ENST00000389995 PPP2R2DQ66LE6 453 aa14.21□□□□□ -0.13
SOD1-202ENST00000389995 KRT40Q6A162 431 aa14.21□□□□□ -0.13
SOD1-202ENST00000389995 CEP85Q6P2H3 762 aa14.21□□□□□ -0.13
SOD1-202ENST00000389995 TMED8Q6PL24 325 aaPredicted RBP14.21□□□□□ -0.13
SOD1-202ENST00000389995 C16orf86Q6ZW13 317 aa14.21□□□□□ -0.13
SOD1-202ENST00000389995 MSL3Q8N5Y2 521 aaKnown RBP14.21□□□□□ -0.13
SOD1-202ENST00000389995 CCDC17Q96LX7 622 aa14.21□□□□□ -0.13
SOD1-202ENST00000389995 SLF1Q9BQI6 1058 aa14.21□□□□□ -0.13
SOD1-202ENST00000389995 TRPV6Q9H1D0 765 aa14.21□□□□□ -0.13
SOD1-202ENST00000389995 HIPK3Q9H422 1215 aa14.21□□□□□ -0.13
SOD1-202ENST00000389995 KANSL2Q9H9L4 492 aa14.21□□□□□ -0.13
SOD1-202ENST00000389995 RAVER2Q9HCJ3 691 aaKnown RBP14.21□□□□□ -0.13
SOD1-202ENST00000389995 PIEZO1Q92508 2521 aa14.2□□□□□ -0.14
SOD1-202ENST00000389995 COPB2P35606 906 aa14.2□□□□□ -0.14
SOD1-202ENST00000389995 CNTN2Q02246 1040 aa14.2□□□□□ -0.14
SOD1-202ENST00000389995 ARMCX2Q7L311 632 aa14.2□□□□□ -0.14
SOD1-202ENST00000389995 CCDC144CPQ8IYA2 1237 aa14.2□□□□□ -0.14
SOD1-202ENST00000389995 VWCEQ96DN2 955 aa14.2□□□□□ -0.14
SOD1-202ENST00000389995 SCLYQ96I15 445 aa14.2□□□□□ -0.14
SOD1-202ENST00000389995 LRFN3Q9BTN0 628 aa14.2□□□□□ -0.14
SOD1-202ENST00000389995 WNT8AQ9H1J5 351 aa14.2□□□□□ -0.14
SOD1-202ENST00000389995 TSPYL2Q9H2G4 693 aaPredicted RBP14.2□□□□□ -0.14
SOD1-202ENST00000389995 ABHD16BQ9H3Z7 469 aa14.2□□□□□ -0.14
SOD1-202ENST00000389995 SPC25Q9HBM1 224 aa14.2□□□□□ -0.14
SOD1-202ENST00000389995 COL4A4P53420 1690 aaPredicted RBP14.2□□□□□ -0.14
SOD1-202ENST00000389995 GRIN2DO15399 1336 aa14.19□□□□□ -0.14
SOD1-202ENST00000389995 ZBBXA8MT70 800 aa14.19□□□□□ -0.14
SOD1-202ENST00000389995 ADD2P35612 726 aa14.19□□□□□ -0.14
SOD1-202ENST00000389995 PSMC6P62333 389 aa14.19□□□□□ -0.14
SOD1-202ENST00000389995 TMEM63BQ5T3F8 832 aa14.19□□□□□ -0.14
SOD1-202ENST00000389995 NOL8Q76FK4 1167 aaKnown RBP14.19□□□□□ -0.14
SOD1-202ENST00000389995 ANKRD35Q8N283 1001 aa14.19□□□□□ -0.14
SOD1-202ENST00000389995 RHPN1Q8TCX5 695 aa14.19□□□□□ -0.14
SOD1-202ENST00000389995 KIFC2Q96AC6 838 aa14.19□□□□□ -0.14
SOD1-202ENST00000389995 CHMP4CQ96CF2 233 aa14.19□□□□□ -0.14
SOD1-202ENST00000389995 C1QTNF1Q9BXJ1 281 aa14.19□□□□□ -0.14
SOD1-202ENST00000389995 KATNBL1Q9H079 304 aa14.19□□□□□ -0.14
SOD1-202ENST00000389995 HOMER2Q9NSB8 354 aa14.19□□□□□ -0.14
SOD1-202ENST00000389995 ATP8A2Q9NTI2 1148 aa14.19□□□□□ -0.14
SOD1-202ENST00000389995 SLC4A7Q9Y6M7 1214 aa14.19□□□□□ -0.14
SOD1-202ENST00000389995 EPOPA6NHQ4 379 aa14.18□□□□□ -0.14
SOD1-202ENST00000389995 F5H6K3 240 aa14.18□□□□□ -0.14
SOD1-202ENST00000389995 B4GALT4O60513 344 aa14.18□□□□□ -0.14
SOD1-202ENST00000389995 NDUFB10O96000 172 aa14.18□□□□□ -0.14
SOD1-202ENST00000389995 KLRC3Q07444 240 aa14.18□□□□□ -0.14
SOD1-202ENST00000389995 ITGA7Q13683 1181 aa14.18□□□□□ -0.14
SOD1-202ENST00000389995 CTR9Q6PD62 1173 aa14.18□□□□□ -0.14
SOD1-202ENST00000389995 ZNF467Q7Z7K2 595 aaPredicted RBP14.18□□□□□ -0.14
SOD1-202ENST00000389995 ERC1Q8IUD2 1116 aa14.18□□□□□ -0.14
SOD1-202ENST00000389995 FTSJ3Q8IY81 847 aaKnown RBP14.18□□□□□ -0.14
SOD1-202ENST00000389995 KHSRPQ92945 711 aaKnown RBP eCLIP14.18□□□□□ -0.14
SOD1-202ENST00000389995 NOC4LQ9BVI4 516 aaKnown RBP14.18□□□□□ -0.14
SOD1-202ENST00000389995 MTIF3Q9H2K0 278 aaKnown RBP14.18□□□□□ -0.14
SOD1-202ENST00000389995 SLC4A4Q9Y6R1 1079 aa14.18□□□□□ -0.14
SOD1-202ENST00000389995 TRIOO75962 3097 aa14.18□□□□□ -0.14
SOD1-202ENST00000389995 FAM86C2PA6NEL3 165 aa14.17□□□□□ -0.14
SOD1-202ENST00000389995 RBAK-RBAKDNI3L0D1 243 aa14.17□□□□□ -0.14
SOD1-202ENST00000389995 ZBED4O75132 1171 aa14.17□□□□□ -0.14
SOD1-202ENST00000389995 ATXN8OSP0DMR3 200 aa14.17□□□□□ -0.14
SOD1-202ENST00000389995 TNFAIP2Q03169 654 aa14.17□□□□□ -0.14
SOD1-202ENST00000389995 TTLL4Q14679 1199 aa14.17□□□□□ -0.14
SOD1-202ENST00000389995 AMOTL1Q8IY63 956 aa14.17□□□□□ -0.14
SOD1-202ENST00000389995 PRPF38AQ8NAV1 312 aaKnown RBP14.17□□□□□ -0.14
SOD1-202ENST00000389995 SLC43A3Q8NBI5 491 aa14.17□□□□□ -0.14
SOD1-202ENST00000389995 BOLA2Q9H3K6 86 aa14.17□□□□□ -0.14
SOD1-202ENST00000389995 PAG1Q9NWQ8 432 aa14.17□□□□□ -0.14
SOD1-202ENST00000389995 PCDHA11Q9Y5I1 949 aa14.17□□□□□ -0.14
SOD1-202ENST00000389995 MTCH2Q9Y6C9 303 aa14.17□□□□□ -0.14
SOD1-202ENST00000389995 TANC1Q9C0D5 1861 aa14.16□□□□□ -0.14
SOD1-202ENST00000389995 C5orf42Q9H799 3197 aa14.16□□□□□ -0.14
SOD1-202ENST00000389995 ARHGEF15O94989 841 aa14.16□□□□□ -0.14
SOD1-202ENST00000389995 CA3P07451 260 aa14.16□□□□□ -0.14
SOD1-202ENST00000389995 ATP2A2P16615 1042 aaKnown RBP14.16□□□□□ -0.14
SOD1-202ENST00000389995 RASA1P20936 1047 aa14.16□□□□□ -0.14
SOD1-202ENST00000389995 DEFB128Q7Z7B8 93 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms