RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 PNOCQ13519 176 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 SEPT14Q6ZU15 432 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 SH3RF3Q8TEJ3 882 aaPredicted RBP11.39□□□□□ -0.59
PKP4-201ENST00000389757 CAPZA3Q96KX2 299 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 TDRD3Q9H7E2 651 aaKnown RBP11.39□□□□□ -0.59
PKP4-201ENST00000389757 A0A1W2PRG0 241 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 LRRIQ4A6NIV6 560 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 LAD1O00515 517 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 TRIM28Q13263 835 aaKnown RBP11.39□□□□□ -0.59
PKP4-201ENST00000389757 USP17L2Q6R6M4 530 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 CYP26C1Q6V0L0 522 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 MARCH10Q8NA82 808 aaPredicted RBP11.39□□□□□ -0.59
PKP4-201ENST00000389757 MTMR6Q9Y217 621 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 PNPLA6Q8IY17 1366 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 NBPF26B4DH59 902 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 SH2B2O14492 632 aaPredicted RBP11.38□□□□□ -0.59
PKP4-201ENST00000389757 TFDP1Q14186 410 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 NBPF10Q6P3W6 841 aaKnown RBP11.38□□□□□ -0.59
PKP4-201ENST00000389757 RSPH3Q86UC2 560 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 NBPF15Q8N660 670 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 PRIMPOLQ96LW4 560 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 STRBPQ96SI9 672 aaKnown RBP11.38□□□□□ -0.59
PKP4-201ENST00000389757 FOXP1Q9H334 677 aaPredicted RBP11.38□□□□□ -0.59
PKP4-201ENST00000389757 PANK4Q9NVE7 773 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 GADD45BO75293 160 aaPredicted RBP11.38□□□□□ -0.59
PKP4-201ENST00000389757 GH2P01242 217 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.38□□□□□ -0.59
PKP4-201ENST00000389757 WDR11Q9BZH6 1224 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 ZSWIM5Q9P217 1185 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 ADAMTS13Q76LX8 1427 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 XRCC5P13010 732 aaKnown RBP11.38□□□□□ -0.59
PKP4-201ENST00000389757 CCND2P30279 289 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 TNNC1P63316 161 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 GPSM2P81274 684 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 PPP1R7Q15435 360 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 SIRT2Q8IXJ6 389 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 FAM193BQ96PV7 902 aaPredicted RBP11.38□□□□□ -0.59
PKP4-201ENST00000389757 CPDO75976 1380 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 SNAP23O00161 211 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 DAPK3O43293 454 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 CMA1P23946 247 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 DCUN1D2Q6PH85 259 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 CCDC114Q96M63 670 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 TTC14Q96N46 770 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 ZHX1Q9UKY1 873 aaPredicted RBP11.38□□□□□ -0.59
PKP4-201ENST00000389757 SPATA31A5Q5VU36 1347 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 SPATA31A7Q8IWB4 1347 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 NRKQ7Z2Y5 1582 aa11.38□□□□□ -0.59
PKP4-201ENST00000389757 ZEB2O60315 1214 aa11.37□□□□□ -0.59
PKP4-201ENST00000389757 TNNC2P02585 160 aa11.37□□□□□ -0.59
PKP4-201ENST00000389757 APOBEC3FQ8IUX4 373 aaKnown RBP11.37□□□□□ -0.59
PKP4-201ENST00000389757 CSRNP2Q9H175 543 aa11.37□□□□□ -0.59
PKP4-201ENST00000389757 INCENPQ9NQS7 918 aa11.37□□□□□ -0.59
PKP4-201ENST00000389757 PTPRUQ92729 1446 aa11.37□□□□□ -0.59
PKP4-201ENST00000389757 BMS1Q14692 1282 aaKnown RBP11.37□□□□□ -0.59
PKP4-201ENST00000389757 PPP2R5AQ15172 486 aa11.37□□□□□ -0.59
PKP4-201ENST00000389757 PROCA1Q8NCQ7 364 aaPredicted RBP11.37□□□□□ -0.59
PKP4-201ENST00000389757 CBX8Q9HC52 389 aa11.37□□□□□ -0.59
PKP4-201ENST00000389757 SEPT9Q9UHD8 586 aaPredicted RBP11.37□□□□□ -0.59
PKP4-201ENST00000389757 ATF7P17544 494 aaPredicted RBP11.37□□□□□ -0.59
PKP4-201ENST00000389757 R3HDM1Q15032 1099 aaKnown RBP11.37□□□□□ -0.59
PKP4-201ENST00000389757 CDC37Q16543 378 aaPredicted RBP11.37□□□□□ -0.59
PKP4-201ENST00000389757 DGKHQ86XP1 1220 aa11.37□□□□□ -0.59
PKP4-201ENST00000389757 TRMT44Q8IYL2 757 aaKnown RBP11.37□□□□□ -0.59
PKP4-201ENST00000389757 SLC7A3Q8WY07 619 aa11.37□□□□□ -0.59
PKP4-201ENST00000389757 NAP1L3Q99457 506 aaPredicted RBP11.37□□□□□ -0.59
PKP4-201ENST00000389757 ZKSCAN5Q9Y2L8 839 aa11.37□□□□□ -0.59
PKP4-201ENST00000389757 GTPBP6O43824 516 aaPredicted RBP11.37□□□□□ -0.59
PKP4-201ENST00000389757 FERP16591 822 aa11.37□□□□□ -0.59
PKP4-201ENST00000389757 KLHL30Q0D2K2 578 aa11.37□□□□□ -0.59
PKP4-201ENST00000389757 CCDC14Q49A88 953 aa11.37□□□□□ -0.59
PKP4-201ENST00000389757 MIS18BP1Q6P0N0 1132 aa11.37□□□□□ -0.59
PKP4-201ENST00000389757 TXNDC16Q9P2K2 825 aa11.37□□□□□ -0.59
PKP4-201ENST00000389757 GAS8O95995 478 aa11.37□□□□□ -0.59
PKP4-201ENST00000389757 ATP2A2P16615 1042 aaKnown RBP11.37□□□□□ -0.59
PKP4-201ENST00000389757 ARL1P40616 181 aaPredicted RBP11.37□□□□□ -0.59
PKP4-201ENST00000389757 LIFRP42702 1097 aa11.37□□□□□ -0.59
PKP4-201ENST00000389757 CALCOCO2Q13137 446 aa11.37□□□□□ -0.59
PKP4-201ENST00000389757 PI4K2BQ8TCG2 481 aa11.37□□□□□ -0.59
PKP4-201ENST00000389757 COA7Q96BR5 231 aa11.37□□□□□ -0.59
PKP4-201ENST00000389757 NUCKS1Q9H1E3 243 aaKnown RBP11.37□□□□□ -0.59
PKP4-201ENST00000389757 CTTNBP2NLQ9P2B4 639 aa11.37□□□□□ -0.59
PKP4-201ENST00000389757 KIAA1024Q9UPX6 916 aa11.37□□□□□ -0.59
PKP4-201ENST00000389757 RETREG2Q8NC44 543 aa11.36□□□□□ -0.59
PKP4-201ENST00000389757 RASGRP4Q8TDF6 673 aa11.36□□□□□ -0.59
PKP4-201ENST00000389757 WRNIP1Q96S55 665 aa11.36□□□□□ -0.59
PKP4-201ENST00000389757 MAGEF1Q9HAY2 307 aa11.36□□□□□ -0.59
PKP4-201ENST00000389757 MTRF1LQ9UGC7 380 aaKnown RBP11.36□□□□□ -0.59
PKP4-201ENST00000389757 CYP2E1P05181 493 aaPredicted RBP11.36□□□□□ -0.59
PKP4-201ENST00000389757 TUBB4BP68371 445 aa11.36□□□□□ -0.59
PKP4-201ENST00000389757 FAM26FQ5R3K3 315 aa11.36□□□□□ -0.59
PKP4-201ENST00000389757 IQCDQ96DY2 449 aa11.36□□□□□ -0.59
PKP4-201ENST00000389757 IFNAR1P17181 557 aa11.36□□□□□ -0.59
PKP4-201ENST00000389757 CHRNA5P30532 468 aa11.36□□□□□ -0.59
PKP4-201ENST00000389757 ARHGAP44Q17R89 818 aa11.36□□□□□ -0.59
PKP4-201ENST00000389757 ARMCX5Q6P1M9 558 aa11.36□□□□□ -0.59
PKP4-201ENST00000389757 KIAA1524Q8TCG1 905 aa11.36□□□□□ -0.59
PKP4-201ENST00000389757 TBCKQ8TEA7 893 aa11.36□□□□□ -0.59
PKP4-201ENST00000389757 ARMCX3Q9UH62 379 aaPredicted RBP11.36□□□□□ -0.59
PKP4-201ENST00000389757 IQCA1LA6NCM1 817 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms