RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 TTC30BQ8N4P2 665 aa17.01■□□□□ 0.31
ALK-201ENST00000389048 PIP4K2CQ8TBX8 421 aa17.01■□□□□ 0.31
ALK-201ENST00000389048 FANCLQ9NW38 375 aa17.01■□□□□ 0.31
ALK-201ENST00000389048 TCP10L2B9ZVM9 353 aa17.01■□□□□ 0.31
ALK-201ENST00000389048 HOXC9P31274 260 aa17.01■□□□□ 0.31
ALK-201ENST00000389048 SCNN1DP51172 638 aa17.01■□□□□ 0.31
ALK-201ENST00000389048 MESDQ14696 234 aa17.01■□□□□ 0.31
ALK-201ENST00000389048 LARGE2Q8N3Y3 721 aa17.01■□□□□ 0.31
ALK-201ENST00000389048 THOC1Q96FV9 657 aaKnown RBP17.01■□□□□ 0.31
ALK-201ENST00000389048 MLXIPQ9HAP2 919 aa17.01■□□□□ 0.31
ALK-201ENST00000389048 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.01■□□□□ 0.31
ALK-201ENST00000389048 OLA1Q9NTK5 396 aaKnown RBP17.01■□□□□ 0.31
ALK-201ENST00000389048 CCNL1Q9UK58 526 aaPredicted RBP17.01■□□□□ 0.31
ALK-201ENST00000389048 ZNF215Q9UL58 517 aaPredicted RBP17.01■□□□□ 0.31
ALK-201ENST00000389048 SLCO1A2P46721 670 aa17■□□□□ 0.31
ALK-201ENST00000389048 KIF9Q9HAQ2 790 aa17■□□□□ 0.31
ALK-201ENST00000389048 HYOU1Q9Y4L1 999 aa17■□□□□ 0.31
ALK-201ENST00000389048 USP19O94966 1318 aa17■□□□□ 0.31
ALK-201ENST00000389048 ALAS1P13196 640 aa17■□□□□ 0.31
ALK-201ENST00000389048 XKR9Q5GH70 373 aa17■□□□□ 0.31
ALK-201ENST00000389048 SMYD4Q8IYR2 804 aaPredicted RBP17■□□□□ 0.31
ALK-201ENST00000389048 METTL22Q9BUU2 404 aaPredicted RBP17■□□□□ 0.31
ALK-201ENST00000389048 DISC1Q9NRI5 854 aa17■□□□□ 0.31
ALK-201ENST00000389048 GNGT2O14610 69 aa17■□□□□ 0.31
ALK-201ENST00000389048 TMED1Q13445 227 aa17■□□□□ 0.31
ALK-201ENST00000389048 CADPS2Q86UW7 1296 aa17■□□□□ 0.31
ALK-201ENST00000389048 PPARAQ07869 468 aa17■□□□□ 0.31
ALK-201ENST00000389048 REXO1Q8N1G1 1221 aaKnown RBP17■□□□□ 0.31
ALK-201ENST00000389048 PARD3BQ8TEW8 1205 aa17■□□□□ 0.31
ALK-201ENST00000389048 CYP4A11Q02928 519 aa17■□□□□ 0.31
ALK-201ENST00000389048 BFSP1Q12934 665 aa17■□□□□ 0.31
ALK-201ENST00000389048 BRDTQ58F21 947 aaPredicted RBP17■□□□□ 0.31
ALK-201ENST00000389048 PPWD1Q96BP3 646 aaKnown RBP17■□□□□ 0.31
ALK-201ENST00000389048 NUCKS1Q9H1E3 243 aaKnown RBP17■□□□□ 0.31
ALK-201ENST00000389048 BAG5Q9UL15 447 aa17■□□□□ 0.31
ALK-201ENST00000389048 PDE8AO60658 829 aa16.99■□□□□ 0.31
ALK-201ENST00000389048 TMED2Q15363 201 aa16.99■□□□□ 0.31
ALK-201ENST00000389048 PTH1RQ03431 593 aa16.99■□□□□ 0.31
ALK-201ENST00000389048 MYOCDQ8IZQ8 938 aa16.99■□□□□ 0.31
ALK-201ENST00000389048 CDC26Q8NHZ8 85 aa16.99■□□□□ 0.31
ALK-201ENST00000389048 CDR2Q01850 454 aa16.99■□□□□ 0.31
ALK-201ENST00000389048 Q3C1V9 767 aa16.99■□□□□ 0.31
ALK-201ENST00000389048 SCYL3Q8IZE3 742 aa16.99■□□□□ 0.31
ALK-201ENST00000389048 RYBPQ8N488 228 aaPredicted RBP16.99■□□□□ 0.31
ALK-201ENST00000389048 PLBD2Q8NHP8 589 aa16.99■□□□□ 0.31
ALK-201ENST00000389048 SGSM2O43147 1006 aa16.99■□□□□ 0.31
ALK-201ENST00000389048 NLRX1Q86UT6 975 aa16.99■□□□□ 0.31
ALK-201ENST00000389048 MRPS25P82663 173 aaKnown RBP16.99■□□□□ 0.31
ALK-201ENST00000389048 TRIM58Q8NG06 486 aa16.99■□□□□ 0.31
ALK-201ENST00000389048 TCP11Q8WWU5 503 aa16.99■□□□□ 0.31
ALK-201ENST00000389048 USP40Q9NVE5 1235 aa16.99■□□□□ 0.31
ALK-201ENST00000389048 PYCARDQ9ULZ3 195 aa16.99■□□□□ 0.31
ALK-201ENST00000389048 NDUFA8P51970 172 aa16.98■□□□□ 0.31
ALK-201ENST00000389048 OTUD6AQ7L8S5 288 aa16.98■□□□□ 0.31
ALK-201ENST00000389048 SDCCAG3Q96C92 435 aa16.98■□□□□ 0.31
ALK-201ENST00000389048 PGBD1Q96JS3 809 aa16.98■□□□□ 0.31
ALK-201ENST00000389048 TMEM259Q4ZIN3 620 aa16.98■□□□□ 0.31
ALK-201ENST00000389048 CFAP36Q96G28 342 aa16.98■□□□□ 0.31
ALK-201ENST00000389048 CD2APQ9Y5K6 639 aa16.98■□□□□ 0.31
ALK-201ENST00000389048 LRRC8AQ8IWT6 810 aa16.98■□□□□ 0.31
ALK-201ENST00000389048 P4HA1P13674 534 aa16.98■□□□□ 0.31
ALK-201ENST00000389048 DCAF5Q96JK2 942 aa16.98■□□□□ 0.31
ALK-201ENST00000389048 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.98■□□□□ 0.31
ALK-201ENST00000389048 SMCR8Q8TEV9 937 aaPredicted RBP16.98■□□□□ 0.31
ALK-201ENST00000389048 GRK7Q8WTQ7 553 aa16.98■□□□□ 0.31
ALK-201ENST00000389048 DNAJC17Q9NVM6 304 aaKnown RBP16.98■□□□□ 0.31
ALK-201ENST00000389048 PCDH11XQ9BZA7 1347 aa16.98■□□□□ 0.31
ALK-201ENST00000389048 PCDH11YQ9BZA8 1340 aa16.98■□□□□ 0.31
ALK-201ENST00000389048 HADHQ16836 314 aaKnown RBP16.97■□□□□ 0.31
ALK-201ENST00000389048 GJA10Q969M2 543 aa16.97■□□□□ 0.31
ALK-201ENST00000389048 KRT82Q9NSB4 513 aa16.97■□□□□ 0.31
ALK-201ENST00000389048 DDX25Q9UHL0 483 aaKnown RBP16.97■□□□□ 0.31
ALK-201ENST00000389048 SART1O43290 800 aaKnown RBP16.97■□□□□ 0.31
ALK-201ENST00000389048 LPXNO60711 386 aa16.97■□□□□ 0.31
ALK-201ENST00000389048 DOK7Q18PE1 504 aa16.97■□□□□ 0.31
ALK-201ENST00000389048 GADL1Q6ZQY3 521 aa16.97■□□□□ 0.31
ALK-201ENST00000389048 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.97■□□□□ 0.31
ALK-201ENST00000389048 EIF4E1BA6NMX2 242 aaKnown RBP16.97■□□□□ 0.31
ALK-201ENST00000389048 GTF2IP78347 998 aa16.97■□□□□ 0.31
ALK-201ENST00000389048 HABP4Q5JVS0 413 aaKnown RBP16.97■□□□□ 0.31
ALK-201ENST00000389048 ZNF790Q6PG37 636 aa16.97■□□□□ 0.31
ALK-201ENST00000389048 OR8K1Q8NGG5 319 aa16.97■□□□□ 0.31
ALK-201ENST00000389048 MAIP1Q8WWC4 291 aa16.97■□□□□ 0.31
ALK-201ENST00000389048 ALKBH8Q96BT7 664 aaKnown RBP16.97■□□□□ 0.31
ALK-201ENST00000389048 PPFIA2O75334 1257 aa16.97■□□□□ 0.31
ALK-201ENST00000389048 IRX4P78413 519 aa16.97■□□□□ 0.31
ALK-201ENST00000389048 CYP4F22Q6NT55 531 aa16.97■□□□□ 0.31
ALK-201ENST00000389048 TRMT10CQ7L0Y3 403 aaKnown RBP16.97■□□□□ 0.31
ALK-201ENST00000389048 USP28Q96RU2 1077 aa16.97■□□□□ 0.31
ALK-201ENST00000389048 ZNF445P59923 1031 aa16.97■□□□□ 0.31
ALK-201ENST00000389048 POLA2Q14181 598 aa16.97■□□□□ 0.31
ALK-201ENST00000389048 C1orf112Q9NSG2 853 aa16.97■□□□□ 0.31
ALK-201ENST00000389048 RTEL1Q9NZ71 1219 aa16.97■□□□□ 0.31
ALK-201ENST00000389048 UBN2Q6ZU65 1347 aa16.96■□□□□ 0.31
ALK-201ENST00000389048 LRRIQ4A6NIV6 560 aa16.96■□□□□ 0.31
ALK-201ENST00000389048 RASEFQ8IZ41 740 aa16.96■□□□□ 0.31
ALK-201ENST00000389048 HOMER3Q9NSC5 361 aa16.96■□□□□ 0.31
ALK-201ENST00000389048 SLC4A7Q9Y6M7 1214 aa16.96■□□□□ 0.31
ALK-201ENST00000389048 NVLO15381 856 aaKnown RBP16.96■□□□□ 0.31
ALK-201ENST00000389048 TNNC2P02585 160 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 208.9 ms