RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 USP17L18D6R9N7 530 aa10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 USP17L22D6RA61 530 aa10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 USP17L17D6RBQ6 530 aa10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 USP17L19D6RCP7 530 aa10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 USP17L20D6RJB6 530 aa10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 ZBED4O75132 1171 aa10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 PRPF40AO75400 957 aaKnown RBP10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 MBD3O95983 291 aa10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 NASPP49321 788 aaPredicted RBP10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 USP17L24Q0WX57 530 aa10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 PABPC4Q13310 644 aaKnown RBP eCLIP10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 FOXD4L6Q3SYB3 417 aaPredicted RBP10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 FOXD4L3Q6VB84 417 aaPredicted RBP10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 FASTKD5Q7L8L6 764 aaKnown RBP10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 CCDC84Q86UT8 332 aaPredicted RBP10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 SAMD3Q8N6K7 520 aa10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 JMYQ8N9B5 988 aa10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 KCNG4Q8TDN1 519 aa10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 MAF1Q9H063 256 aa10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 RPAP3Q9H6T3 665 aaPredicted RBP10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 PSTPIP2Q9H939 334 aa10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 ELP3Q9H9T3 547 aa10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 GBA2Q9HCG7 927 aaPredicted RBP10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 NMRK2Q9NPI5 230 aa10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 RIC8AQ9NPQ8 531 aa10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 HOXC10Q9NYD6 342 aa10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 RCOR1Q9UKL0 485 aa10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 KCNH4Q9UQ05 1017 aa10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 CNPY2Q9Y2B0 182 aa10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 MRPL11Q9Y3B7 192 aaKnown RBP10.14□□□□□ -0.79
RNU1-28P-201ENST00000383861 ABCB11O95342 1321 aa10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 A0A0G2JLL6 359 aaPredicted RBP10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 FIBPO43427 364 aa10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 FLOT1O75955 427 aa10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 ICAM1P05362 532 aa10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 POTEIP0CG38 1075 aa10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 POTEJP0CG39 1038 aa10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 OAZ1P54368 228 aa10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 HMGCS2P54868 508 aa10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 UBE2HP62256 183 aa10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 NR5A1Q13285 461 aa10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 ORC2Q13416 577 aaPredicted RBP10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 COG2Q14746 738 aa10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 STK38Q15208 465 aa10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 SF3A1Q15459 793 aaKnown RBP10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 NPY5RQ15761 445 aa10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 ANO1Q5XXA6 986 aa10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 CATSPERGQ6ZRH7 1159 aa10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 PRRT2Q7Z6L0 340 aaPredicted RBP10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 REXO1Q8N1G1 1221 aaKnown RBP10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 LEO1Q8WVC0 666 aaPredicted RBP10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 TNFRSF25Q93038 417 aa10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 COA7Q96BR5 231 aa10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 NAP1L4Q99733 375 aaKnown RBP10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 ZNF408Q9H9D4 720 aa10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 LMBRD1Q9NUN5 540 aa10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 TFIP11Q9UBB9 837 aaKnown RBP10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 PPP1R9AQ9ULJ8 1098 aa10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 FZD1Q9UP38 647 aa10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 MORC2Q9Y6X9 1032 aaPredicted RBP10.13□□□□□ -0.79
RNU1-28P-201ENST00000383861 PAPPA2Q9BXP8 1791 aa10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 M0R2N6 131 aa10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 TRAF5O00463 557 aa10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 PPP6R2O75170 966 aa10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 CELF2O95319 508 aaKnown RBP10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 FOSP01100 380 aaPredicted RBP10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 HOXA7P31268 230 aaPredicted RBP10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 DSG3P32926 999 aa10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 AP3B2Q13367 1082 aa10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 SNAPC2Q13487 334 aa10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 NONOQ15233 471 aaKnown RBP eCLIP10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 TYW1BQ6NUM6 668 aa10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 FAM173BQ6P4H8 233 aa10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 DLK2Q6UY11 383 aa10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 MCF2L2Q86YR7 1114 aa10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 MB21D1Q8N884 522 aa10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 LINC00301Q8NCQ3 95 aa10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 OXER1Q8TDS5 423 aa10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 ZNF526Q8TF50 670 aaPredicted RBP10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 OPTNQ96CV9 577 aa10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 SHISA4Q96DD7 197 aa10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 OTUD5Q96G74 571 aa10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 USP28Q96RU2 1077 aa10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 SLC38A10Q9HBR0 1119 aa10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 GPBP1L1Q9HC44 474 aaPredicted RBP10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 MAP3K20Q9NYL2 800 aaKnown RBP10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 PCDHA6Q9UN73 950 aa10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 PCDHA8Q9Y5H6 950 aa10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 POLR2AP24928 1970 aaKnown RBP10.12□□□□□ -0.79
RNU1-28P-201ENST00000383861 MYH6P13533 1939 aa10.11□□□□□ -0.79
RNU1-28P-201ENST00000383861 PIK3CDO00329 1044 aa10.11□□□□□ -0.79
RNU1-28P-201ENST00000383861 IRF6O14896 467 aa10.11□□□□□ -0.79
RNU1-28P-201ENST00000383861 ATP2A1O14983 1001 aa10.11□□□□□ -0.79
RNU1-28P-201ENST00000383861 SPTLC2O15270 562 aa10.11□□□□□ -0.79
RNU1-28P-201ENST00000383861 TRAK2O60296 914 aa10.11□□□□□ -0.79
RNU1-28P-201ENST00000383861 PPP1R11O60927 126 aaPredicted RBP10.11□□□□□ -0.79
RNU1-28P-201ENST00000383861 ITGBL1O95965 494 aaPredicted RBP10.11□□□□□ -0.79
RNU1-28P-201ENST00000383861 ZBTB48P10074 688 aaPredicted RBP10.11□□□□□ -0.79
RNU1-28P-201ENST00000383861 NBR1Q14596 966 aa10.11□□□□□ -0.79
RNU1-28P-201ENST00000383861 SLC39A14Q15043 492 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms