RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 SPC25Q9HBM1 224 aa21.27■■□□□ 1
RPUSD3-201ENST00000383820 MROH7Q68CQ1 1323 aa21.27■□□□□ 0.99
RPUSD3-201ENST00000383820 STAT2P52630 851 aa21.26■□□□□ 0.99
RPUSD3-201ENST00000383820 PPARAQ07869 468 aa21.26■□□□□ 0.99
RPUSD3-201ENST00000383820 ZMYM1Q5SVZ6 1142 aa21.26■□□□□ 0.99
RPUSD3-201ENST00000383820 FAM160B2Q86V87 743 aa21.26■□□□□ 0.99
RPUSD3-201ENST00000383820 CHURC1Q8WUH1 139 aa21.26■□□□□ 0.99
RPUSD3-201ENST00000383820 GMCL1Q96IK5 515 aa21.26■□□□□ 0.99
RPUSD3-201ENST00000383820 GLT1D1Q96MS3 346 aa21.26■□□□□ 0.99
RPUSD3-201ENST00000383820 UPF3AQ9H1J1 476 aaKnown RBP21.26■□□□□ 0.99
RPUSD3-201ENST00000383820 A0A0C4DFX4 3053 aa21.25■□□□□ 0.99
RPUSD3-201ENST00000383820 EPHB4P54760 987 aa21.25■□□□□ 0.99
RPUSD3-201ENST00000383820 GJA9P57773 515 aa21.25■□□□□ 0.99
RPUSD3-201ENST00000383820 TFAP4Q01664 338 aa21.25■□□□□ 0.99
RPUSD3-201ENST00000383820 CCDC144BQ3MJ40 725 aa21.25■□□□□ 0.99
RPUSD3-201ENST00000383820 ARMCX2Q7L311 632 aa21.25■□□□□ 0.99
RPUSD3-201ENST00000383820 SEC62Q99442 399 aaKnown RBP21.25■□□□□ 0.99
RPUSD3-201ENST00000383820 FSD1Q9BTV5 496 aa21.25■□□□□ 0.99
RPUSD3-201ENST00000383820 CUL9Q8IWT3 2517 aa21.25■□□□□ 0.99
RPUSD3-201ENST00000383820 LAMA2P24043 3122 aaKnown RBP21.24■□□□□ 0.99
RPUSD3-201ENST00000383820 TMEM232C9JQI7 657 aa21.24■□□□□ 0.99
RPUSD3-201ENST00000383820 PLA2G6O60733 806 aa21.24■□□□□ 0.99
RPUSD3-201ENST00000383820 C6orf222P0C671 652 aaPredicted RBP21.24■□□□□ 0.99
RPUSD3-201ENST00000383820 CDK7P50613 346 aa21.24■□□□□ 0.99
RPUSD3-201ENST00000383820 NKX3-2P78367 333 aa21.24■□□□□ 0.99
RPUSD3-201ENST00000383820 TKFCQ3LXA3 575 aa21.24■□□□□ 0.99
RPUSD3-201ENST00000383820 STAG1Q8WVM7 1258 aa21.24■□□□□ 0.99
RPUSD3-201ENST00000383820 TTYH1Q9H313 450 aaPredicted RBP21.24■□□□□ 0.99
RPUSD3-201ENST00000383820 ACAD9Q9H845 621 aa21.24■□□□□ 0.99
RPUSD3-201ENST00000383820 TBX21Q9UL17 535 aa21.24■□□□□ 0.99
RPUSD3-201ENST00000383820 MCM3APO60318 1980 aa21.24■□□□□ 0.99
RPUSD3-201ENST00000383820 MYADML2A6NDP7 307 aa21.23■□□□□ 0.99
RPUSD3-201ENST00000383820 TIMP1P01033 207 aa21.23■□□□□ 0.99
RPUSD3-201ENST00000383820 ASGR1P07306 291 aa21.23■□□□□ 0.99
RPUSD3-201ENST00000383820 SLC1A4P43007 532 aa21.23■□□□□ 0.99
RPUSD3-201ENST00000383820 CCDC144CPQ8IYA2 1237 aa21.23■□□□□ 0.99
RPUSD3-201ENST00000383820 FAM133AQ8N9E0 248 aa21.23■□□□□ 0.99
RPUSD3-201ENST00000383820 KATNBL1Q9H079 304 aa21.23■□□□□ 0.99
RPUSD3-201ENST00000383820 ADCY6O43306 1168 aa21.22■□□□□ 0.99
RPUSD3-201ENST00000383820 MX1P20591 662 aa21.22■□□□□ 0.99
RPUSD3-201ENST00000383820 HOMER2Q9NSB8 354 aa21.22■□□□□ 0.99
RPUSD3-201ENST00000383820 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.22■□□□□ 0.99
RPUSD3-201ENST00000383820 PCDHB15Q9Y5E8 787 aa21.22■□□□□ 0.99
RPUSD3-201ENST00000383820 A0A0U1RQG5 324 aaPredicted RBP21.21■□□□□ 0.99
RPUSD3-201ENST00000383820 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.21■□□□□ 0.99
RPUSD3-201ENST00000383820 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.21■□□□□ 0.99
RPUSD3-201ENST00000383820 ASB14A6NK59 587 aa21.21■□□□□ 0.99
RPUSD3-201ENST00000383820 ARVCFO00192 962 aa21.21■□□□□ 0.99
RPUSD3-201ENST00000383820 CNTN2Q02246 1040 aa21.21■□□□□ 0.99
RPUSD3-201ENST00000383820 GNASQ5JWF2 1037 aa21.21■□□□□ 0.99
RPUSD3-201ENST00000383820 MFSD5Q6N075 450 aa21.21■□□□□ 0.99
RPUSD3-201ENST00000383820 CCDC174Q6PII3 467 aa21.21■□□□□ 0.99
RPUSD3-201ENST00000383820 MAFAQ8NHW3 353 aaPredicted RBP21.21■□□□□ 0.99
RPUSD3-201ENST00000383820 COL25A1Q9BXS0 654 aaPredicted RBP21.21■□□□□ 0.99
RPUSD3-201ENST00000383820 A1CFQ9NQ94 594 aaKnown RBP21.21■□□□□ 0.99
RPUSD3-201ENST00000383820 RNF146Q9NTX7 359 aa21.21■□□□□ 0.99
RPUSD3-201ENST00000383820 ISY1Q9ULR0 285 aaKnown RBP21.21■□□□□ 0.99
RPUSD3-201ENST00000383820 ZNF536O15090 1300 aa21.21■□□□□ 0.99
RPUSD3-201ENST00000383820 TSPY2A6NKD2 308 aa21.2■□□□□ 0.98
RPUSD3-201ENST00000383820 MCCP23508 829 aa21.2■□□□□ 0.98
RPUSD3-201ENST00000383820 IKQ13123 557 aaPredicted RBP21.2■□□□□ 0.98
RPUSD3-201ENST00000383820 PPIGQ13427 754 aaKnown RBP eCLIP21.2■□□□□ 0.98
RPUSD3-201ENST00000383820 RCSD1Q6JBY9 416 aa21.2■□□□□ 0.98
RPUSD3-201ENST00000383820 OTUD7AQ8TE49 926 aaPredicted RBP21.2■□□□□ 0.98
RPUSD3-201ENST00000383820 MYLIPQ8WY64 445 aa21.2■□□□□ 0.98
RPUSD3-201ENST00000383820 VTI1AQ96AJ9 217 aa21.2■□□□□ 0.98
RPUSD3-201ENST00000383820 AGBL1Q96MI9 1066 aa21.2■□□□□ 0.98
RPUSD3-201ENST00000383820 CTAGE5O15320 804 aa21.19■□□□□ 0.98
RPUSD3-201ENST00000383820 IRX5P78411 483 aaPredicted RBP21.19■□□□□ 0.98
RPUSD3-201ENST00000383820 TNFAIP2Q03169 654 aa21.19■□□□□ 0.98
RPUSD3-201ENST00000383820 TRERF1Q96PN7 1200 aa21.19■□□□□ 0.98
RPUSD3-201ENST00000383820 ANAPC4Q9UJX5 808 aa21.19■□□□□ 0.98
RPUSD3-201ENST00000383820 STX8Q9UNK0 236 aa21.19■□□□□ 0.98
RPUSD3-201ENST00000383820 SALL3Q9BXA9 1300 aa21.19■□□□□ 0.98
RPUSD3-201ENST00000383820 SOWAHBA6NEL2 793 aa21.18■□□□□ 0.98
RPUSD3-201ENST00000383820 FOXP2O15409 715 aa21.18■□□□□ 0.98
RPUSD3-201ENST00000383820 TLR3O15455 904 aaKnown RBP21.18■□□□□ 0.98
RPUSD3-201ENST00000383820 CABYRO75952 493 aa21.18■□□□□ 0.98
RPUSD3-201ENST00000383820 NOVP48745 357 aa21.18■□□□□ 0.98
RPUSD3-201ENST00000383820 FAM126BQ8IXS8 530 aa21.18■□□□□ 0.98
RPUSD3-201ENST00000383820 IL17RBQ9NRM6 502 aa21.18■□□□□ 0.98
RPUSD3-201ENST00000383820 ALAS1P13196 640 aa21.17■□□□□ 0.98
RPUSD3-201ENST00000383820 FOSL2P15408 326 aa21.17■□□□□ 0.98
RPUSD3-201ENST00000383820 DNAJB2P25686 324 aa21.17■□□□□ 0.98
RPUSD3-201ENST00000383820 CCDC129Q6ZRS4 1044 aa21.17■□□□□ 0.98
RPUSD3-201ENST00000383820 KCTD1Q719H9 257 aa21.17■□□□□ 0.98
RPUSD3-201ENST00000383820 TMEM199Q8N511 208 aa21.17■□□□□ 0.98
RPUSD3-201ENST00000383820 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.17■□□□□ 0.988e-7■■■■■ 32.7
RPUSD3-201ENST00000383820 SEZ6LQ9BYH1 1024 aa21.17■□□□□ 0.98
RPUSD3-201ENST00000383820 PRR12Q9ULL5 1215 aa21.17■□□□□ 0.98
RPUSD3-201ENST00000383820 GNEQ9Y223 722 aaKnown RBP21.17■□□□□ 0.98
RPUSD3-201ENST00000383820 LRRC37A2A6NM11 1700 aa21.16■□□□□ 0.98
RPUSD3-201ENST00000383820 ORC4O43929 436 aa21.16■□□□□ 0.98
RPUSD3-201ENST00000383820 FGRP09769 529 aa21.16■□□□□ 0.98
RPUSD3-201ENST00000383820 CTDSPL2Q05D32 466 aa21.16■□□□□ 0.98
RPUSD3-201ENST00000383820 ALX1Q15699 326 aa21.16■□□□□ 0.98
RPUSD3-201ENST00000383820 TICAM2Q86XR7 235 aa21.16■□□□□ 0.98
RPUSD3-201ENST00000383820 SLC43A3Q8NBI5 491 aa21.16■□□□□ 0.98
RPUSD3-201ENST00000383820 EVI5LQ96CN4 794 aa21.16■□□□□ 0.98
RPUSD3-201ENST00000383820 ZBTB47Q9UFB7 747 aaPredicted RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 164.3 ms