RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 SPC25Q9HBM1 224 aa31.31■■■□□ 2.6
NPHP3-202ENST00000383282 ACLYP53396 1101 aa31.3■■■□□ 2.6
NPHP3-202ENST00000383282 ZNF697Q5TEC3 545 aa31.3■■■□□ 2.6
NPHP3-202ENST00000383282 DDX52Q9Y2R4 599 aaKnown RBP eCLIP31.3■■■□□ 2.6
NPHP3-202ENST00000383282 MCCP23508 829 aa31.29■■■□□ 2.6
NPHP3-202ENST00000383282 CTDSPL2Q05D32 466 aa31.29■■■□□ 2.6
NPHP3-202ENST00000383282 ARMCX2Q7L311 632 aa31.29■■■□□ 2.6
NPHP3-202ENST00000383282 KLHDC9Q8NEP7 349 aa31.29■■■□□ 2.6
NPHP3-202ENST00000383282 RAG1P15918 1043 aa31.28■■■□□ 2.6
NPHP3-202ENST00000383282 KCNA10Q16322 511 aa31.28■■■□□ 2.6
NPHP3-202ENST00000383282 TKFCQ3LXA3 575 aa31.28■■■□□ 2.6
NPHP3-202ENST00000383282 C9orf50Q5SZB4 431 aa31.28■■■□□ 2.6
NPHP3-202ENST00000383282 DCDC2CA8MYV0 355 aa31.27■■■□□ 2.6
NPHP3-202ENST00000383282 RANBP6O60518 1105 aaKnown RBP31.27■■■□□ 2.6
NPHP3-202ENST00000383282 PLA2G6O60733 806 aa31.27■■■□□ 2.6
NPHP3-202ENST00000383282 C6orf222P0C671 652 aaPredicted RBP31.27■■■□□ 2.6
NPHP3-202ENST00000383282 PCSK9Q8NBP7 692 aaKnown RBP31.27■■■□□ 2.6
NPHP3-202ENST00000383282 CHMP4CQ96CF2 233 aa31.27■■■□□ 2.6
NPHP3-202ENST00000383282 FGD4Q96M96 766 aa31.27■■■□□ 2.6
NPHP3-202ENST00000383282 GLT1D1Q96MS3 346 aa31.27■■■□□ 2.6
NPHP3-202ENST00000383282 TOX2Q96NM4 488 aa31.27■■■□□ 2.6
NPHP3-202ENST00000383282 CRBNQ96SW2 442 aa31.27■■■□□ 2.6
NPHP3-202ENST00000383282 HELLSQ9NRZ9 838 aa31.27■■■□□ 2.6
NPHP3-202ENST00000383282 RNF146Q9NTX7 359 aa31.27■■■□□ 2.6
NPHP3-202ENST00000383282 TMEM39AQ9NV64 488 aa31.27■■■□□ 2.6
NPHP3-202ENST00000383282 DLL1O00548 723 aa31.26■■■□□ 2.59
NPHP3-202ENST00000383282 KIAA0355O15063 1070 aa31.26■■■□□ 2.59
NPHP3-202ENST00000383282 FOXP2O15409 715 aa31.26■■■□□ 2.59
NPHP3-202ENST00000383282 CST5P28325 142 aaPredicted RBP31.26■■■□□ 2.59
NPHP3-202ENST00000383282 CCDC144BQ3MJ40 725 aa31.26■■■□□ 2.59
NPHP3-202ENST00000383282 ANKRD33Q7Z3H0 272 aa31.26■■■□□ 2.59
NPHP3-202ENST00000383282 ANAPC4Q9UJX5 808 aa31.26■■■□□ 2.59
NPHP3-202ENST00000383282 CCSAPQ6IQ19 270 aaPredicted RBP31.25■■■□□ 2.59
NPHP3-202ENST00000383282 RCSD1Q6JBY9 416 aa31.25■■■□□ 2.59
NPHP3-202ENST00000383282 KCTD1Q719H9 257 aa31.25■■■□□ 2.59
NPHP3-202ENST00000383282 CCDC144CPQ8IYA2 1237 aa31.25■■■□□ 2.59
NPHP3-202ENST00000383282 AGBL1Q96MI9 1066 aa31.25■■■□□ 2.59
NPHP3-202ENST00000383282 FAM161BQ96MY7 647 aa31.25■■■□□ 2.59
NPHP3-202ENST00000383282 IL17RBQ9NRM6 502 aa31.25■■■□□ 2.59
NPHP3-202ENST00000383282 PDE1AP54750 535 aa31.24■■■□□ 2.59
NPHP3-202ENST00000383282 VPS53Q5VIR6 699 aa31.24■■■□□ 2.59
NPHP3-202ENST00000383282 A1CFQ9NQ94 594 aaKnown RBP31.24■■■□□ 2.59
NPHP3-202ENST00000383282 INCENPQ9NQS7 918 aa31.24■■■□□ 2.59
NPHP3-202ENST00000383282 TOMM22Q9NS69 142 aa31.24■■■□□ 2.59
NPHP3-202ENST00000383282 ZNF536O15090 1300 aa31.24■■■□□ 2.59
NPHP3-202ENST00000383282 ELP1O95163 1332 aa31.24■■■□□ 2.59
NPHP3-202ENST00000383282 MROH7Q68CQ1 1323 aa31.24■■■□□ 2.59
NPHP3-202ENST00000383282 MYADML2A6NDP7 307 aa31.23■■■□□ 2.59
NPHP3-202ENST00000383282 ASB14A6NK59 587 aa31.23■■■□□ 2.59
NPHP3-202ENST00000383282 NMT2O60551 498 aa31.23■■■□□ 2.59
NPHP3-202ENST00000383282 ALAS1P13196 640 aa31.23■■■□□ 2.59
NPHP3-202ENST00000383282 ITGB8P26012 769 aa31.23■■■□□ 2.59
NPHP3-202ENST00000383282 GJA9P57773 515 aa31.23■■■□□ 2.59
NPHP3-202ENST00000383282 CNTN2Q02246 1040 aa31.23■■■□□ 2.59
NPHP3-202ENST00000383282 HDAC1Q13547 482 aaPredicted RBP31.23■■■□□ 2.59
NPHP3-202ENST00000383282 FAM133AQ8N9E0 248 aa31.23■■■□□ 2.59
NPHP3-202ENST00000383282 VTI1AQ96AJ9 217 aa31.23■■■□□ 2.59
NPHP3-202ENST00000383282 TRERF1Q96PN7 1200 aa31.23■■■□□ 2.59
NPHP3-202ENST00000383282 MTMR7Q9Y216 660 aa31.23■■■□□ 2.59
NPHP3-202ENST00000383282 ORC4O43929 436 aa31.22■■■□□ 2.59
NPHP3-202ENST00000383282 ASGR1P07306 291 aa31.22■■■□□ 2.59
NPHP3-202ENST00000383282 SMAD3P84022 425 aaKnown RBP31.22■■■□□ 2.59
NPHP3-202ENST00000383282 FAAP100Q0VG06 881 aa31.22■■■□□ 2.59
NPHP3-202ENST00000383282 ALX1Q15699 326 aa31.22■■■□□ 2.59
NPHP3-202ENST00000383282 CCDC174Q6PII3 467 aa31.22■■■□□ 2.59
NPHP3-202ENST00000383282 GUCD1Q96NT3 240 aa31.22■■■□□ 2.59
NPHP3-202ENST00000383282 UPF3AQ9H1J1 476 aaKnown RBP31.22■■■□□ 2.59
NPHP3-202ENST00000383282 FPGSQ05932 587 aa31.21■■■□□ 2.59
NPHP3-202ENST00000383282 CCDC96Q2M329 555 aa31.21■■■□□ 2.59
NPHP3-202ENST00000383282 MCMDC2Q4G0Z9 681 aa31.21■■■□□ 2.59
NPHP3-202ENST00000383282 GNASQ5JWF2 1037 aa31.21■■■□□ 2.59
NPHP3-202ENST00000383282 TICAM2Q86XR7 235 aa31.21■■■□□ 2.59
NPHP3-202ENST00000383282 RNPC3Q96LT9 517 aaKnown RBP31.21■■■□□ 2.59
NPHP3-202ENST00000383282 PRR12Q9ULL5 1215 aa31.21■■■□□ 2.59
NPHP3-202ENST00000383282 ADCY6O43306 1168 aa31.2■■■□□ 2.59
NPHP3-202ENST00000383282 NOL8Q76FK4 1167 aaKnown RBP31.2■■■□□ 2.59
NPHP3-202ENST00000383282 DCAF4Q8WV16 495 aa31.2■■■□□ 2.59
NPHP3-202ENST00000383282 LAMA2P24043 3122 aaKnown RBP31.19■■■□□ 2.58
NPHP3-202ENST00000383282 A0A0U1RQG5 324 aaPredicted RBP31.19■■■□□ 2.58
NPHP3-202ENST00000383282 KATNBL1Q9H079 304 aa31.19■■■□□ 2.58
NPHP3-202ENST00000383282 FGRP09769 529 aa31.18■■■□□ 2.58
NPHP3-202ENST00000383282 NOVP48745 357 aa31.18■■■□□ 2.58
NPHP3-202ENST00000383282 SNAP25P60880 206 aa31.18■■■□□ 2.58
NPHP3-202ENST00000383282 RRP12Q5JTH9 1297 aaKnown RBP31.18■■■□□ 2.58
NPHP3-202ENST00000383282 FAM227BQ96M60 508 aa31.18■■■□□ 2.58
NPHP3-202ENST00000383282 CCPG1Q9ULG6 757 aa31.18■■■□□ 2.58
NPHP3-202ENST00000383282 SOWAHBA6NEL2 793 aa31.17■■■□□ 2.58
NPHP3-202ENST00000383282 FGAP02671 866 aa31.17■■■□□ 2.58
NPHP3-202ENST00000383282 IRX5P78411 483 aaPredicted RBP31.17■■■□□ 2.58
NPHP3-202ENST00000383282 TNFAIP2Q03169 654 aa31.17■■■□□ 2.58
NPHP3-202ENST00000383282 RASGRP2Q7LDG7 609 aa31.17■■■□□ 2.58
NPHP3-202ENST00000383282 A0A0D9SFI3 127 aa31.16■■■□□ 2.58
NPHP3-202ENST00000383282 TRIM6-TRIM34B2RNG4 842 aa31.16■■■□□ 2.58
NPHP3-202ENST00000383282 ARVCFO00192 962 aa31.16■■■□□ 2.58
NPHP3-202ENST00000383282 TIMP1P01033 207 aa31.16■■■□□ 2.58
NPHP3-202ENST00000383282 TLR3O15455 904 aaKnown RBP31.15■■■□□ 2.58
NPHP3-202ENST00000383282 ICAM1P05362 532 aa31.15■■■□□ 2.58
NPHP3-202ENST00000383282 TOP1P11387 765 aaKnown RBP31.15■■■□□ 2.58
NPHP3-202ENST00000383282 EPHB4P54760 987 aa31.15■■■□□ 2.58
NPHP3-202ENST00000383282 MUM1L1Q5H9M0 696 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms