RNA–Protein interactions for RNA: ENST00000382041.7

NIN-203, Transcript of ninein, humanhuman

TSL 1 (best) BASIC

Gene NIN, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-203ENST00000382041 MIGA2Q7L4E1 593 aa17.12■□□□□ 0.33
NIN-203ENST00000382041 TSC1Q92574 1164 aa17.12■□□□□ 0.33
NIN-203ENST00000382041 HINFPQ9BQA5 517 aa17.12■□□□□ 0.33
NIN-203ENST00000382041 PIH1D3Q9NQM4 214 aaKnown RBP17.12■□□□□ 0.33
NIN-203ENST00000382041 ANKFY1Q9P2R3 1169 aa17.12■□□□□ 0.33
NIN-203ENST00000382041 SEMA3EO15041 775 aa17.12■□□□□ 0.33
NIN-203ENST00000382041 YARSP54577 528 aaKnown RBP17.12■□□□□ 0.33
NIN-203ENST00000382041 NR5A1Q13285 461 aa17.12■□□□□ 0.33
NIN-203ENST00000382041 NSUN7Q8NE18 718 aaKnown RBP17.12■□□□□ 0.33
NIN-203ENST00000382041 GPR108Q9NPR9 543 aa17.12■□□□□ 0.33
NIN-203ENST00000382041 ATF5Q9Y2D1 282 aaPredicted RBP17.12■□□□□ 0.33
NIN-203ENST00000382041 POLR2FP61218 127 aaKnown RBP17.12■□□□□ 0.33
NIN-203ENST00000382041 SPOUT1Q5T280 376 aaKnown RBP17.12■□□□□ 0.33
NIN-203ENST00000382041 BSPRYQ5W0U4 402 aa17.12■□□□□ 0.33
NIN-203ENST00000382041 KIAA1524Q8TCG1 905 aa17.12■□□□□ 0.33
NIN-203ENST00000382041 COA7Q96BR5 231 aa17.12■□□□□ 0.33
NIN-203ENST00000382041 ARMCX3Q9UH62 379 aaPredicted RBP17.12■□□□□ 0.33
NIN-203ENST00000382041 IFT20Q8IY31 132 aa17.12■□□□□ 0.33
NIN-203ENST00000382041 SYNE4Q8N205 404 aa17.12■□□□□ 0.33
NIN-203ENST00000382041 PIGSQ96S52 555 aa17.12■□□□□ 0.33
NIN-203ENST00000382041 PRDM15P57071 1507 aaPredicted RBP17.12■□□□□ 0.33
NIN-203ENST00000382041 LRRIQ4A6NIV6 560 aa17.11■□□□□ 0.33
NIN-203ENST00000382041 GOLGA8FQ08AF8 430 aa17.11■□□□□ 0.33
NIN-203ENST00000382041 GOLGA8DPQ0D2H9 430 aa17.11■□□□□ 0.33
NIN-203ENST00000382041 PABPC4Q13310 644 aaKnown RBP eCLIP17.11■□□□□ 0.33
NIN-203ENST00000382041 USP17L2Q6R6M4 530 aa17.11■□□□□ 0.33
NIN-203ENST00000382041 ADAT2Q7Z6V5 191 aaKnown RBP17.11■□□□□ 0.33
NIN-203ENST00000382041 SESTD1Q86VW0 696 aa17.11■□□□□ 0.33
NIN-203ENST00000382041 MMS19Q96T76 1030 aa17.11■□□□□ 0.33
NIN-203ENST00000382041 STAT1P42224 750 aa17.11■□□□□ 0.33
NIN-203ENST00000382041 PPP2R5CQ13362 524 aa17.11■□□□□ 0.33
NIN-203ENST00000382041 CASC4Q6P4E1 433 aa17.11■□□□□ 0.33
NIN-203ENST00000382041 LARGE1O95461 756 aa17.11■□□□□ 0.33
NIN-203ENST00000382041 SNX16P57768 344 aa17.11■□□□□ 0.33
NIN-203ENST00000382041 ADAM9Q13443 819 aa17.11■□□□□ 0.33
NIN-203ENST00000382041 RASGRF1Q13972 1273 aa17.11■□□□□ 0.33
NIN-203ENST00000382041 OR8K1Q8NGG5 319 aa17.11■□□□□ 0.33
NIN-203ENST00000382041 USP17L3A6NCW0 530 aa17.1■□□□□ 0.33
NIN-203ENST00000382041 USP17L4A6NCW7 530 aa17.1■□□□□ 0.33
NIN-203ENST00000382041 RXRBP28702 533 aa17.1■□□□□ 0.33
NIN-203ENST00000382041 USP17L1Q7RTZ2 530 aa17.1■□□□□ 0.33
NIN-203ENST00000382041 AIFM3Q96NN9 605 aa17.1■□□□□ 0.33
NIN-203ENST00000382041 CYP27B1O15528 508 aa17.1■□□□□ 0.33
NIN-203ENST00000382041 GTPBP6O43824 516 aaPredicted RBP17.1■□□□□ 0.33
NIN-203ENST00000382041 SNAP25P60880 206 aa17.1■□□□□ 0.33
NIN-203ENST00000382041 IFRD2Q12894 506 aaPredicted RBP17.1■□□□□ 0.33
NIN-203ENST00000382041 CEP57Q86XR8 500 aa17.1■□□□□ 0.33
NIN-203ENST00000382041 OSBPL3Q9H4L5 887 aa17.1■□□□□ 0.33
NIN-203ENST00000382041 AXIN2Q9Y2T1 843 aa17.1■□□□□ 0.33
NIN-203ENST00000382041 ZNF521Q96K83 1311 aa17.1■□□□□ 0.33
NIN-203ENST00000382041 MAP7D1Q3KQU3 841 aa17.1■□□□□ 0.33
NIN-203ENST00000382041 ZSWIM5Q9P217 1185 aa17.1■□□□□ 0.33
NIN-203ENST00000382041 TTLL1O95922 423 aa17.1■□□□□ 0.33
NIN-203ENST00000382041 LRRC41Q15345 812 aa17.1■□□□□ 0.33
NIN-203ENST00000382041 PPM1KQ8N3J5 372 aa17.1■□□□□ 0.33
NIN-203ENST00000382041 FMNL1O95466 1100 aaPredicted RBP17.1■□□□□ 0.33
NIN-203ENST00000382041 LONRF2Q1L5Z9 754 aa17.1■□□□□ 0.33
NIN-203ENST00000382041 CFAP221Q4G0U5 840 aa17.1■□□□□ 0.33
NIN-203ENST00000382041 BRINP3Q76B58 766 aa17.1■□□□□ 0.33
NIN-203ENST00000382041 AMNQ9BXJ7 453 aa17.1■□□□□ 0.33
NIN-203ENST00000382041 ODF2LQ9ULJ1 636 aa17.1■□□□□ 0.33
NIN-203ENST00000382041 PCDHA5Q9Y5H7 936 aa17.1■□□□□ 0.33
NIN-203ENST00000382041 GNA14O95837 355 aa17.09■□□□□ 0.33
NIN-203ENST00000382041 TUBBP07437 444 aa17.09■□□□□ 0.33
NIN-203ENST00000382041 POLGP54098 1239 aaPredicted RBP17.09■□□□□ 0.33
NIN-203ENST00000382041 MECOMQ03112 1051 aa17.09■□□□□ 0.33
NIN-203ENST00000382041 FAM26FQ5R3K3 315 aa17.09■□□□□ 0.33
NIN-203ENST00000382041 ARMCX5Q6P1M9 558 aa17.09■□□□□ 0.33
NIN-203ENST00000382041 ANKRD13CQ8N6S4 541 aa17.09■□□□□ 0.33
NIN-203ENST00000382041 SCYL2Q6P3W7 929 aa17.09■□□□□ 0.33
NIN-203ENST00000382041 SND1Q7KZF4 910 aaKnown RBP eCLIP17.09■□□□□ 0.33
NIN-203ENST00000382041 MCF2L2Q86YR7 1114 aa17.09■□□□□ 0.33
NIN-203ENST00000382041 SEPT12Q8IYM1 358 aa17.09■□□□□ 0.33
NIN-203ENST00000382041 AFAP1L1Q8TED9 768 aa17.09■□□□□ 0.33
NIN-203ENST00000382041 BEGAINQ9BUH8 593 aa17.09■□□□□ 0.33
NIN-203ENST00000382041 EPHA10Q5JZY3 1008 aa17.09■□□□□ 0.33
NIN-203ENST00000382041 KIF1BO60333 1816 aa17.09■□□□□ 0.33
NIN-203ENST00000382041 OGFRQ9NZT2 677 aa17.09■□□□□ 0.33
NIN-203ENST00000382041 ANKARQ7Z5J8 1434 aa17.09■□□□□ 0.33
NIN-203ENST00000382041 MEIS1O00470 390 aa17.09■□□□□ 0.33
NIN-203ENST00000382041 LRCH2Q5VUJ6 765 aa17.09■□□□□ 0.33
NIN-203ENST00000382041 TAB3Q8N5C8 712 aaPredicted RBP17.09■□□□□ 0.33
NIN-203ENST00000382041 TTLL11Q8NHH1 800 aa17.09■□□□□ 0.33
NIN-203ENST00000382041 RABGAP1Q9Y3P9 1069 aa17.09■□□□□ 0.33
NIN-203ENST00000382041 VPS41P49754 854 aa17.08■□□□□ 0.33
NIN-203ENST00000382041 SETDB1Q15047 1291 aa17.08■□□□□ 0.33
NIN-203ENST00000382041 PCDHA4Q9UN74 947 aa17.08■□□□□ 0.33
NIN-203ENST00000382041 CLASP1Q7Z460 1538 aa17.08■□□□□ 0.33
NIN-203ENST00000382041 PALLDQ8WX93 1383 aa17.08■□□□□ 0.33
NIN-203ENST00000382041 KCNK3O14649 394 aa17.08■□□□□ 0.33
NIN-203ENST00000382041 ZBTB8OSQ8IWT0 167 aa17.08■□□□□ 0.33
NIN-203ENST00000382041 GUCY2FP51841 1108 aa17.08■□□□□ 0.32
NIN-203ENST00000382041 CACNB3P54284 484 aa17.08■□□□□ 0.32
NIN-203ENST00000382041 GABPAQ06546 454 aa17.08■□□□□ 0.32
NIN-203ENST00000382041 CLUL1Q15846 466 aa17.08■□□□□ 0.32
NIN-203ENST00000382041 ODR4Q5SWX8 454 aa17.08■□□□□ 0.32
NIN-203ENST00000382041 SYCE1Q8N0S2 351 aa17.08■□□□□ 0.32
NIN-203ENST00000382041 ZNF526Q8TF50 670 aaPredicted RBP17.08■□□□□ 0.32
NIN-203ENST00000382041 SERPINB13Q9UIV8 391 aa17.08■□□□□ 0.32
NIN-203ENST00000382041 IFNB1P01574 187 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms