RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 SGMS1Q86VZ5 419 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 FNBP1Q96RU3 617 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 CRAMP1Q96RY5 1269 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 PIM2Q9P1W9 311 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 COL5A2P05997 1499 aaPredicted RBP13.64□□□□□ -0.23
GABPB1-203ENST00000380877 RCAN1P53805 252 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 BIRC3Q13489 604 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 MYOCDQ8IZQ8 938 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 CEP112Q8N8E3 955 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 LMBR1Q8WVP7 490 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 SYNCQ9H7C4 482 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 TDRD3Q9H7E2 651 aaKnown RBP13.64□□□□□ -0.23
GABPB1-203ENST00000380877 PNMA2Q9UL42 364 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 STK36Q9NRP7 1315 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 ANKRD62A6NC57 917 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 EXOC3O60645 756 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 CDC27P30260 824 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 MIGA2Q7L4E1 593 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 TMTC1Q8IUR5 882 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 FMNL3Q8IVF7 1028 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 SMCR8Q8TEV9 937 aaPredicted RBP13.64□□□□□ -0.23
GABPB1-203ENST00000380877 PAGR1Q9BTK6 254 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 EXOC7Q9UPT5 735 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 A0A087WWV3 80 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 SLFN14P0C7P3 912 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 CDC25AP30304 524 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 CYP4A11Q02928 519 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 ARHGEF16Q5VV41 709 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 TBC1D16Q8TBP0 767 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 DCPSQ96C86 337 aaKnown RBP13.64□□□□□ -0.23
GABPB1-203ENST00000380877 MRFAP1L1Q96HT8 127 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 TAOK3Q9H2K8 898 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 UBR1Q8IWV7 1749 aa13.63□□□□□ -0.23
GABPB1-203ENST00000380877 CCDC66A2RUB6 948 aa13.63□□□□□ -0.23
GABPB1-203ENST00000380877 NEBLO76041 1014 aa13.63□□□□□ -0.23
GABPB1-203ENST00000380877 MORC3Q14149 939 aa13.63□□□□□ -0.23
GABPB1-203ENST00000380877 AOC3Q16853 763 aa13.63□□□□□ -0.23
GABPB1-203ENST00000380877 GNPTABQ3T906 1256 aa13.63□□□□□ -0.23
GABPB1-203ENST00000380877 VWA3BQ502W6 1294 aa13.63□□□□□ -0.23
GABPB1-203ENST00000380877 AK8Q96MA6 479 aa13.63□□□□□ -0.23
GABPB1-203ENST00000380877 SELENOOQ9BVL4 669 aa13.63□□□□□ -0.23
GABPB1-203ENST00000380877 SRPRBQ9Y5M8 271 aaKnown RBP13.63□□□□□ -0.23
GABPB1-203ENST00000380877 GCFC2P16383 781 aaKnown RBP13.63□□□□□ -0.23
GABPB1-203ENST00000380877 SPATA1Q5VX52 437 aa13.63□□□□□ -0.23
GABPB1-203ENST00000380877 TMEM179Q6ZVK1 233 aa13.63□□□□□ -0.23
GABPB1-203ENST00000380877 TDRD7Q8NHU6 1098 aaKnown RBP13.63□□□□□ -0.23
GABPB1-203ENST00000380877 VTI1AQ96AJ9 217 aa13.63□□□□□ -0.23
GABPB1-203ENST00000380877 GOLGA6L10A0A0M3HER8 536 aa13.63□□□□□ -0.23
GABPB1-203ENST00000380877 PRPHP41219 470 aa13.63□□□□□ -0.23
GABPB1-203ENST00000380877 CBX1P83916 185 aa13.63□□□□□ -0.23
GABPB1-203ENST00000380877 IFFO1Q0D2I5 559 aa13.63□□□□□ -0.23
GABPB1-203ENST00000380877 AZI2Q9H6S1 392 aa13.63□□□□□ -0.23
GABPB1-203ENST00000380877 KCNJ18B7U540 433 aa13.62□□□□□ -0.23
GABPB1-203ENST00000380877 GH2P01242 217 aa13.62□□□□□ -0.23
GABPB1-203ENST00000380877 KCNJ12Q14500 433 aa13.62□□□□□ -0.23
GABPB1-203ENST00000380877 FAM26FQ5R3K3 315 aa13.62□□□□□ -0.23
GABPB1-203ENST00000380877 TSPYL1Q9H0U9 437 aa13.62□□□□□ -0.23
GABPB1-203ENST00000380877 ZBTB7AO95365 584 aa13.62□□□□□ -0.23
GABPB1-203ENST00000380877 STAT2P52630 851 aa13.62□□□□□ -0.23
GABPB1-203ENST00000380877 CUEDC2Q9H467 287 aa13.62□□□□□ -0.23
GABPB1-203ENST00000380877 MAGEF1Q9HAY2 307 aa13.62□□□□□ -0.23
GABPB1-203ENST00000380877 SLC39A2Q9NP94 309 aa13.62□□□□□ -0.23
GABPB1-203ENST00000380877 H0YHG0 523 aa13.62□□□□□ -0.23
GABPB1-203ENST00000380877 KIAA0753Q2KHM9 967 aa13.62□□□□□ -0.23
GABPB1-203ENST00000380877 KRT26Q7Z3Y9 468 aa13.62□□□□□ -0.23
GABPB1-203ENST00000380877 CEP95Q96GE4 821 aa13.62□□□□□ -0.23
GABPB1-203ENST00000380877 CAPZA3Q96KX2 299 aa13.62□□□□□ -0.23
GABPB1-203ENST00000380877 CPVLQ9H3G5 476 aa13.62□□□□□ -0.23
GABPB1-203ENST00000380877 ARFGAP3Q9NP61 516 aa13.62□□□□□ -0.23
GABPB1-203ENST00000380877 ORC4O43929 436 aa13.62□□□□□ -0.23
GABPB1-203ENST00000380877 STRN3Q13033 797 aa13.62□□□□□ -0.23
GABPB1-203ENST00000380877 SYDE2Q5VT97 1194 aa13.62□□□□□ -0.23
GABPB1-203ENST00000380877 C11orf57Q6ZUT1 292 aaPredicted RBP13.62□□□□□ -0.23
GABPB1-203ENST00000380877 GRAMD1CQ8IYS0 662 aa13.62□□□□□ -0.23
GABPB1-203ENST00000380877 FAM207AQ9NSI2 230 aaPredicted RBP13.62□□□□□ -0.23
GABPB1-203ENST00000380877 KIAA1024Q9UPX6 916 aa13.62□□□□□ -0.23
GABPB1-203ENST00000380877 FAM196BA6NMK8 535 aa13.61□□□□□ -0.23
GABPB1-203ENST00000380877 BMS1Q14692 1282 aaKnown RBP13.61□□□□□ -0.23
GABPB1-203ENST00000380877 GOLGA1Q92805 767 aa13.61□□□□□ -0.23
GABPB1-203ENST00000380877 PNMA6FA0A0J9YX94 578 aa13.61□□□□□ -0.23
GABPB1-203ENST00000380877 ADKP55263 362 aaKnown RBP13.61□□□□□ -0.23
GABPB1-203ENST00000380877 ANKRD35Q8N283 1001 aa13.61□□□□□ -0.23
GABPB1-203ENST00000380877 PCDHB13Q9Y5F0 798 aa13.61□□□□□ -0.23
GABPB1-203ENST00000380877 TAF6LQ9Y6J9 622 aa13.61□□□□□ -0.23
GABPB1-203ENST00000380877 MYO3BQ8WXR4 1341 aa13.61□□□□□ -0.23
GABPB1-203ENST00000380877 LRMPQ12912 555 aa13.61□□□□□ -0.23
GABPB1-203ENST00000380877 CDC37Q16543 378 aaPredicted RBP13.61□□□□□ -0.23
GABPB1-203ENST00000380877 SLC9C1Q4G0N8 1177 aa13.61□□□□□ -0.23
GABPB1-203ENST00000380877 RGS22Q8NE09 1264 aa13.61□□□□□ -0.23
GABPB1-203ENST00000380877 LARP4BQ92615 738 aaKnown RBP13.61□□□□□ -0.23
GABPB1-203ENST00000380877 TEKT3Q9BXF9 490 aa13.61□□□□□ -0.23
GABPB1-203ENST00000380877 USP17L5A8MUK1 530 aa13.61□□□□□ -0.23
GABPB1-203ENST00000380877 POLR3GO15318 223 aaPredicted RBP13.61□□□□□ -0.23
GABPB1-203ENST00000380877 PFKFB3Q16875 520 aaPredicted RBP13.61□□□□□ -0.23
GABPB1-203ENST00000380877 FBXO33Q7Z6M2 555 aa13.61□□□□□ -0.23
GABPB1-203ENST00000380877 EPSTI1Q96J88 318 aa13.61□□□□□ -0.23
GABPB1-203ENST00000380877 PANK4Q9NVE7 773 aa13.61□□□□□ -0.23
GABPB1-203ENST00000380877 ERCC5P28715 1186 aaPredicted RBP13.6□□□□□ -0.23
GABPB1-203ENST00000380877 CHRNA5P30532 468 aa13.6□□□□□ -0.23
GABPB1-203ENST00000380877 UBXN2AP68543 259 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms