RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 CUL4BQ13620 913 aa14.26□□□□□ -0.13
VPS16-202ENST00000380445 RRAGBQ5VZM2 374 aa14.26□□□□□ -0.13
VPS16-202ENST00000380445 APOBEC3HQ6NTF7 200 aaKnown RBP14.26□□□□□ -0.13
VPS16-202ENST00000380445 NYAP1Q6ZVC0 841 aa14.26□□□□□ -0.13
VPS16-202ENST00000380445 NEK8Q86SG6 692 aa14.26□□□□□ -0.13
VPS16-202ENST00000380445 C2CD5Q86YS7 1000 aa14.26□□□□□ -0.13
VPS16-202ENST00000380445 ZDHHC15Q96MV8 337 aa14.26□□□□□ -0.13
VPS16-202ENST00000380445 EHD4Q9H223 541 aa14.26□□□□□ -0.13
VPS16-202ENST00000380445 CRKP46108 304 aa14.26□□□□□ -0.13
VPS16-202ENST00000380445 STRIP1Q5VSL9 837 aa14.26□□□□□ -0.13
VPS16-202ENST00000380445 SPECC1LQ69YQ0 1117 aa14.26□□□□□ -0.13
VPS16-202ENST00000380445 REXO1Q8N1G1 1221 aaKnown RBP14.26□□□□□ -0.13
VPS16-202ENST00000380445 DHX36Q9H2U1 1008 aaKnown RBP14.26□□□□□ -0.13
VPS16-202ENST00000380445 CPVLQ9H3G5 476 aa14.26□□□□□ -0.13
VPS16-202ENST00000380445 CUEDC2Q9H467 287 aa14.26□□□□□ -0.13
VPS16-202ENST00000380445 MAGEF1Q9HAY2 307 aa14.26□□□□□ -0.13
VPS16-202ENST00000380445 SAMSN1Q9NSI8 373 aaKnown RBP14.26□□□□□ -0.13
VPS16-202ENST00000380445 PPP1R3GB7ZBB8 358 aa14.25□□□□□ -0.13
VPS16-202ENST00000380445 KLHL10Q6JEL2 608 aa14.25□□□□□ -0.13
VPS16-202ENST00000380445 UBA5Q9GZZ9 404 aa14.25□□□□□ -0.13
VPS16-202ENST00000380445 MYH8P13535 1937 aa14.25□□□□□ -0.13
VPS16-202ENST00000380445 CCNT1O60563 726 aaKnown RBP14.25□□□□□ -0.13
VPS16-202ENST00000380445 OR52Z1P0C646 297 aa14.25□□□□□ -0.13
VPS16-202ENST00000380445 CASP1P29466 404 aa14.25□□□□□ -0.13
VPS16-202ENST00000380445 FILIP1LQ4L180 1135 aa14.25□□□□□ -0.13
VPS16-202ENST00000380445 GPATCH4Q5T3I0 446 aaKnown RBP14.25□□□□□ -0.13
VPS16-202ENST00000380445 ZNF658Q5TYW1 1059 aaPredicted RBP14.25□□□□□ -0.13
VPS16-202ENST00000380445 MED15Q96RN5 788 aa14.25□□□□□ -0.13
VPS16-202ENST00000380445 MXD3Q9BW11 206 aa14.25□□□□□ -0.13
VPS16-202ENST00000380445 TMEM60Q9H2L4 133 aa14.25□□□□□ -0.13
VPS16-202ENST00000380445 TRMT1Q9NXH9 659 aaKnown RBP14.25□□□□□ -0.13
VPS16-202ENST00000380445 COL11A2P13942 1736 aaPredicted RBP14.25□□□□□ -0.13
VPS16-202ENST00000380445 USP27XA6NNY8 438 aa14.24□□□□□ -0.13
VPS16-202ENST00000380445 SHMT1P34896 483 aa14.24□□□□□ -0.13
VPS16-202ENST00000380445 NR1I3Q14994 352 aa14.24□□□□□ -0.13
VPS16-202ENST00000380445 KARSQ15046 597 aaKnown RBP14.24□□□□□ -0.13
VPS16-202ENST00000380445 LETM2Q2VYF4 491 aa14.24□□□□□ -0.13
VPS16-202ENST00000380445 PPP1R18Q6NYC8 613 aa14.24□□□□□ -0.13
VPS16-202ENST00000380445 STAMQ92783 540 aa14.24□□□□□ -0.13
VPS16-202ENST00000380445 CNKSR1Q969H4 720 aa14.24□□□□□ -0.13
VPS16-202ENST00000380445 TMX1Q9H3N1 280 aa14.24□□□□□ -0.13
VPS16-202ENST00000380445 DBNDD1Q9H9R9 158 aa14.24□□□□□ -0.13
VPS16-202ENST00000380445 FRMPD2Q68DX3 1309 aaPredicted RBP14.24□□□□□ -0.13
VPS16-202ENST00000380445 A0A1B0GTH6 734 aa14.24□□□□□ -0.13
VPS16-202ENST00000380445 TMEM232C9JQI7 657 aa14.24□□□□□ -0.13
VPS16-202ENST00000380445 RPN1P04843 607 aaKnown RBP14.24□□□□□ -0.13
VPS16-202ENST00000380445 CD44P16070 742 aaKnown RBP14.24□□□□□ -0.13
VPS16-202ENST00000380445 HSP90AA4PQ58FG1 418 aa14.24□□□□□ -0.13
VPS16-202ENST00000380445 E4F1Q66K89 784 aaPredicted RBP14.24□□□□□ -0.13
VPS16-202ENST00000380445 RASGRP2Q7LDG7 609 aa14.24□□□□□ -0.13
VPS16-202ENST00000380445 FCHSD1Q86WN1 690 aa14.24□□□□□ -0.13
VPS16-202ENST00000380445 LRRC47Q8N1G4 583 aaKnown RBP14.24□□□□□ -0.13
VPS16-202ENST00000380445 BLZF1Q9H2G9 400 aa14.24□□□□□ -0.13
VPS16-202ENST00000380445 INTS13Q9NVM9 706 aa14.24□□□□□ -0.13
VPS16-202ENST00000380445 RWDD2AQ9UIY3 292 aa14.24□□□□□ -0.13
VPS16-202ENST00000380445 ZNF543Q08ER8 600 aa14.23□□□□□ -0.13
VPS16-202ENST00000380445 TBX2Q13207 712 aaPredicted RBP14.23□□□□□ -0.13
VPS16-202ENST00000380445 TAF3Q5VWG9 929 aa14.23□□□□□ -0.13
VPS16-202ENST00000380445 MSL1Q68DK7 614 aa14.23□□□□□ -0.13
VPS16-202ENST00000380445 ANKRD20A12PQ8NF67 263 aa14.23□□□□□ -0.13
VPS16-202ENST00000380445 MTRQ99707 1265 aa14.23□□□□□ -0.13
VPS16-202ENST00000380445 PNMA6FA0A0J9YX94 578 aa14.23□□□□□ -0.13
VPS16-202ENST00000380445 MPHOSPH10O00566 681 aaKnown RBP14.23□□□□□ -0.13
VPS16-202ENST00000380445 CTIFO43310 598 aaKnown RBP14.23□□□□□ -0.13
VPS16-202ENST00000380445 CDC25AP30304 524 aa14.23□□□□□ -0.13
VPS16-202ENST00000380445 ADCY7P51828 1080 aa14.23□□□□□ -0.13
VPS16-202ENST00000380445 SPAG1Q07617 926 aa14.23□□□□□ -0.13
VPS16-202ENST00000380445 PAK1Q13153 545 aa14.23□□□□□ -0.13
VPS16-202ENST00000380445 CDKAL1Q5VV42 579 aa14.23□□□□□ -0.13
VPS16-202ENST00000380445 KIF18AQ8NI77 898 aa14.23□□□□□ -0.13
VPS16-202ENST00000380445 TBCKQ8TEA7 893 aa14.23□□□□□ -0.13
VPS16-202ENST00000380445 ARHGAP6O43182 974 aa14.22□□□□□ -0.13
VPS16-202ENST00000380445 NPM3O75607 178 aaKnown RBP14.22□□□□□ -0.13
VPS16-202ENST00000380445 KCNB1Q14721 858 aa14.22□□□□□ -0.13
VPS16-202ENST00000380445 ZNF592Q92610 1267 aa14.22□□□□□ -0.13
VPS16-202ENST00000380445 CCDC47Q96A33 483 aaKnown RBP14.22□□□□□ -0.13
VPS16-202ENST00000380445 EIF6P56537 245 aaKnown RBP14.22□□□□□ -0.13
VPS16-202ENST00000380445 STX17P56962 302 aa14.22□□□□□ -0.13
VPS16-202ENST00000380445 CC2D2BQ6DHV5 1058 aa14.22□□□□□ -0.13
VPS16-202ENST00000380445 SMYD4Q8IYR2 804 aaPredicted RBP14.22□□□□□ -0.13
VPS16-202ENST00000380445 IDI2Q9BXS1 227 aa14.22□□□□□ -0.13
VPS16-202ENST00000380445 KBTBD4Q9NVX7 518 aa14.22□□□□□ -0.13
VPS16-202ENST00000380445 PI4KBQ9UBF8 816 aa14.22□□□□□ -0.13
VPS16-202ENST00000380445 BIN2Q9UBW5 565 aaPredicted RBP14.22□□□□□ -0.13
VPS16-202ENST00000380445 CTNND2Q9UQB3 1225 aa14.22□□□□□ -0.13
VPS16-202ENST00000380445 ECE2O60344 883 aa14.22□□□□□ -0.13
VPS16-202ENST00000380445 STX10O60499 249 aa14.22□□□□□ -0.13
VPS16-202ENST00000380445 RBM5P52756 815 aaKnown RBP eCLIP14.22□□□□□ -0.13
VPS16-202ENST00000380445 STIM1Q13586 685 aa14.22□□□□□ -0.13
VPS16-202ENST00000380445 DACT2Q5SW24 774 aa14.22□□□□□ -0.13
VPS16-202ENST00000380445 CABP7Q86V35 215 aa14.22□□□□□ -0.13
VPS16-202ENST00000380445 KIAA0825Q8IV33 1275 aa14.22□□□□□ -0.13
VPS16-202ENST00000380445 PPP1R13BQ96KQ4 1090 aa14.22□□□□□ -0.13
VPS16-202ENST00000380445 TRIM34Q9BYJ4 488 aa14.22□□□□□ -0.13
VPS16-202ENST00000380445 GPCPD1Q9NPB8 672 aa14.22□□□□□ -0.13
VPS16-202ENST00000380445 SERPINA10Q9UK55 444 aa14.22□□□□□ -0.13
VPS16-202ENST00000380445 ZSCAN12O43309 604 aa14.21□□□□□ -0.13
VPS16-202ENST00000380445 AMPD3Q01432 767 aa14.21□□□□□ -0.13
VPS16-202ENST00000380445 NFIAQ12857 509 aa14.21□□□□□ -0.13
VPS16-202ENST00000380445 JAKMIP3Q5VZ66 844 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms